RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 SLC35F4A4IF30 521 aa7.41□□□□□ -1.22
CLNS1A-209ENST00000527299 FIGNL2A6NMB9 653 aa7.41□□□□□ -1.22
CLNS1A-209ENST00000527299 TRIM66O15016 1216 aa7.41□□□□□ -1.22
CLNS1A-209ENST00000527299 SPINT1O43278 529 aa7.41□□□□□ -1.22
CLNS1A-209ENST00000527299 SLURP2P0DP57 97 aa7.41□□□□□ -1.22
CLNS1A-209ENST00000527299 TSC1Q92574 1164 aa7.41□□□□□ -1.22
CLNS1A-209ENST00000527299 MAGEB6P1A0A0J9YX57 407 aa7.4□□□□□ -1.22
CLNS1A-209ENST00000527299 ARHGEF15O94989 841 aa7.4□□□□□ -1.22
CLNS1A-209ENST00000527299 CBLBQ13191 982 aa7.4□□□□□ -1.22
CLNS1A-209ENST00000527299 PPP1R26Q5T8A7 1209 aaPredicted RBP7.4□□□□□ -1.22
CLNS1A-209ENST00000527299 SVOPQ8N4V2 548 aa7.4□□□□□ -1.22
CLNS1A-209ENST00000527299 GPKOWQ92917 476 aaPredicted RBP eCLIP7.4□□□□□ -1.22
CLNS1A-209ENST00000527299 NUTM2BA6NNL0 878 aaPredicted RBP7.39□□□□□ -1.23
CLNS1A-209ENST00000527299 NUTM2EB1AL46 878 aaPredicted RBP7.39□□□□□ -1.23
CLNS1A-209ENST00000527299 ERFEQ4G0M1 354 aa7.39□□□□□ -1.23
CLNS1A-209ENST00000527299 NUTM2DQ5VT03 806 aaPredicted RBP7.39□□□□□ -1.23
CLNS1A-209ENST00000527299 MYSM1Q5VVJ2 828 aa7.39□□□□□ -1.23
CLNS1A-209ENST00000527299 NUTM2AQ8IVF1 878 aaPredicted RBP7.39□□□□□ -1.23
CLNS1A-209ENST00000527299 WHAMMQ8TF30 809 aa7.39□□□□□ -1.23
CLNS1A-209ENST00000527299 PGPEP1Q9NXJ5 209 aa7.39□□□□□ -1.23
CLNS1A-209ENST00000527299 ITGA6P23229 1130 aa7.38□□□□□ -1.23
CLNS1A-209ENST00000527299 DNMT3AQ9Y6K1 912 aaPredicted RBP7.38□□□□□ -1.23
CLNS1A-209ENST00000527299 HELBQ8NG08 1087 aaPredicted RBP7.37□□□□□ -1.23
CLNS1A-209ENST00000527299 CARD14Q9BXL6 1004 aa7.37□□□□□ -1.23
CLNS1A-209ENST00000527299 IGHA1P01876 353 aa7.36□□□□□ -1.23
CLNS1A-209ENST00000527299 RTL5Q5HYW3 569 aaPredicted RBP7.36□□□□□ -1.23
CLNS1A-209ENST00000527299 SV2AQ7L0J3 742 aa7.36□□□□□ -1.23
CLNS1A-209ENST00000527299 VWA5B2Q8N398 1253 aa7.36□□□□□ -1.23
CLNS1A-209ENST00000527299 IRS1P35568 1242 aa7.35□□□□□ -1.23
CLNS1A-209ENST00000527299 GPAT2Q6NUI2 795 aa7.35□□□□□ -1.23
CLNS1A-209ENST00000527299 KANK3Q6NY19 840 aa7.35□□□□□ -1.23
CLNS1A-209ENST00000527299 PDXDC2PQ6P474 469 aa7.35□□□□□ -1.23
CLNS1A-209ENST00000527299 KCTD15Q96SI1 283 aaPredicted RBP7.35□□□□□ -1.23
CLNS1A-209ENST00000527299 CTSOP43234 321 aaPredicted RBP7.34□□□□□ -1.23
CLNS1A-209ENST00000527299 DHX9Q08211 1270 aaKnown RBP7.34□□□□□ -1.23
CLNS1A-209ENST00000527299 AK7Q96M32 723 aa7.34□□□□□ -1.23
CLNS1A-209ENST00000527299 CDV3Q9UKY7 258 aaKnown RBP7.34□□□□□ -1.23
CLNS1A-209ENST00000527299 SENP3-EIF4A1A0A087X0R7 540 aa7.33□□□□□ -1.24
CLNS1A-209ENST00000527299 CDC14CA4D256 554 aa7.33□□□□□ -1.24
CLNS1A-209ENST00000527299 MARSP56192 900 aaKnown RBP7.33□□□□□ -1.24
CLNS1A-209ENST00000527299 FOXK2Q01167 660 aa7.33□□□□□ -1.24
CLNS1A-209ENST00000527299 AGBL1Q96MI9 1066 aa7.33□□□□□ -1.24
CLNS1A-209ENST00000527299 SCARF2Q96GP6 870 aaPredicted RBP7.32□□□□□ -1.24
CLNS1A-209ENST00000527299 INSM2Q96T92 566 aaPredicted RBP7.32□□□□□ -1.24
CLNS1A-209ENST00000527299 ARHGAP9Q9BRR9 750 aa7.32□□□□□ -1.24
CLNS1A-209ENST00000527299 ADAMTS2O95450 1211 aa7.31□□□□□ -1.24
CLNS1A-209ENST00000527299 RELBQ01201 579 aa7.31□□□□□ -1.24
CLNS1A-209ENST00000527299 INTS6LQ5JSJ4 861 aaKnown RBP7.31□□□□□ -1.24
CLNS1A-209ENST00000527299 RNF217Q8TC41 542 aa7.31□□□□□ -1.24
CLNS1A-209ENST00000527299 SLC10A4Q96EP9 437 aa7.31□□□□□ -1.24
CLNS1A-209ENST00000527299 CLK2P49760 499 aaKnown RBP7.3□□□□□ -1.24
CLNS1A-209ENST00000527299 SRSF11Q05519 484 aaKnown RBP7.3□□□□□ -1.24
CLNS1A-209ENST00000527299 CTDSPL2Q05D32 466 aa7.3□□□□□ -1.24
CLNS1A-209ENST00000527299 LYPD4Q6UWN0 246 aa7.3□□□□□ -1.24
CLNS1A-209ENST00000527299 FKBPLQ9UIM3 349 aa7.3□□□□□ -1.24
CLNS1A-209ENST00000527299 PDE4DQ08499 809 aa7.29□□□□□ -1.24
CLNS1A-209ENST00000527299 OCSTAMPQ9BR26 566 aa7.29□□□□□ -1.24
CLNS1A-209ENST00000527299 POLMQ9NP87 494 aaPredicted RBP7.29□□□□□ -1.24
CLNS1A-209ENST00000527299 GAS6Q14393 721 aa7.28□□□□□ -1.24
CLNS1A-209ENST00000527299 ZBTB33Q86T24 672 aa7.28□□□□□ -1.24
CLNS1A-209ENST00000527299 ZNF395Q9H8N7 513 aaPredicted RBP7.28□□□□□ -1.24
CLNS1A-209ENST00000527299 ZC3H4Q9UPT8 1303 aaKnown RBP7.27□□□□□ -1.24
CLNS1A-209ENST00000527299 CELA2BP08218 269 aaPredicted RBP7.27□□□□□ -1.25
CLNS1A-209ENST00000527299 FOXD4L5Q5VV16 416 aaPredicted RBP7.27□□□□□ -1.25
CLNS1A-209ENST00000527299 LRRN4Q8WUT4 740 aa7.27□□□□□ -1.25
CLNS1A-209ENST00000527299 MAP3K10Q02779 954 aa7.26□□□□□ -1.25
CLNS1A-209ENST00000527299 KDF1Q8NAX2 398 aaPredicted RBP7.26□□□□□ -1.25
CLNS1A-209ENST00000527299 TMPRSS4Q9NRS4 437 aa7.26□□□□□ -1.25
CLNS1A-209ENST00000527299 CUEDC1Q9NWM3 386 aaPredicted RBP7.26□□□□□ -1.25
CLNS1A-209ENST00000527299 ADH1AP07327 375 aa7.25□□□□□ -1.25
CLNS1A-209ENST00000527299 PTK2Q05397 1052 aa7.25□□□□□ -1.25
CLNS1A-209ENST00000527299 ZNF784Q8NCA9 323 aaPredicted RBP7.25□□□□□ -1.25
CLNS1A-209ENST00000527299 RSPH6AQ9H0K4 717 aa7.25□□□□□ -1.25
CLNS1A-209ENST00000527299 POLR3EQ9NVU0 708 aa7.25□□□□□ -1.25
CLNS1A-209ENST00000527299 GPSM3Q9Y4H4 160 aa7.25□□□□□ -1.25
CLNS1A-209ENST00000527299 LILRA1O75019 489 aa7.24□□□□□ -1.25
CLNS1A-209ENST00000527299 ADD1P35611 737 aaKnown RBP7.24□□□□□ -1.25
CLNS1A-209ENST00000527299 PTGIRP43119 386 aa7.24□□□□□ -1.25
CLNS1A-209ENST00000527299 NR6A1Q15406 480 aa7.24□□□□□ -1.25
CLNS1A-209ENST00000527299 ENAMQ9NRM1 1142 aa7.24□□□□□ -1.25
CLNS1A-209ENST00000527299 NBPF20Q3BBV1 942 aa7.23□□□□□ -1.25
CLNS1A-209ENST00000527299 PLA2G4EQ3MJ16 856 aa7.23□□□□□ -1.25
CLNS1A-209ENST00000527299 LYSMD3Q7Z3D4 306 aa7.23□□□□□ -1.25
CLNS1A-209ENST00000527299 ADAM32Q8TC27 787 aa7.23□□□□□ -1.25
CLNS1A-209ENST00000527299 MSTNO14793 375 aa7.22□□□□□ -1.25
CLNS1A-209ENST00000527299 DCAF5Q96JK2 942 aa7.22□□□□□ -1.25
CLNS1A-209ENST00000527299 PHF20L1A8MW92 1017 aa7.21□□□□□ -1.26
CLNS1A-209ENST00000527299 ERVH48-1M5A8F1 160 aa7.21□□□□□ -1.26
CLNS1A-209ENST00000527299 ADAM23O75077 832 aa7.21□□□□□ -1.26
CLNS1A-209ENST00000527299 ITGB2P05107 769 aa7.21□□□□□ -1.26
CLNS1A-209ENST00000527299 FBXO31Q5XUX0 539 aaPredicted RBP7.21□□□□□ -1.26
CLNS1A-209ENST00000527299 GMCL1Q96IK5 515 aa7.21□□□□□ -1.26
CLNS1A-209ENST00000527299 MBIPQ9NS73 344 aa7.21□□□□□ -1.26
CLNS1A-209ENST00000527299 CNTNAP5Q8WYK1 1306 aa7.21□□□□□ -1.26
CLNS1A-209ENST00000527299 RNF144AP50876 292 aaPredicted RBP7.2□□□□□ -1.26
CLNS1A-209ENST00000527299 XP32Q5T750 250 aa7.2□□□□□ -1.26
CLNS1A-209ENST00000527299 ZNF837Q96EG3 531 aaPredicted RBP7.2□□□□□ -1.26
CLNS1A-209ENST00000527299 ESPNB1AK53 854 aa7.19□□□□□ -1.26
CLNS1A-209ENST00000527299 RAB15P59190 212 aa7.19□□□□□ -1.26
CLNS1A-209ENST00000527299 PPP2R2DQ66LE6 453 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms