RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 ZNF280DQ6N043 979 aa8.14□□□□□ -1.11
TRAPPC11-209ENST00000512476 TRIM34Q9BYJ4 488 aa8.14□□□□□ -1.11
TRAPPC11-209ENST00000512476 OSBPL2Q9H1P3 480 aa8.14□□□□□ -1.11
TRAPPC11-209ENST00000512476 QTRT2Q9H974 415 aaKnown RBP8.14□□□□□ -1.11
TRAPPC11-209ENST00000512476 SPDYE16A6NNV3 312 aaPredicted RBP8.13□□□□□ -1.11
TRAPPC11-209ENST00000512476 TNFRSF10BO14763 440 aa8.13□□□□□ -1.11
TRAPPC11-209ENST00000512476 HSD3B2P26439 372 aa8.13□□□□□ -1.11
TRAPPC11-209ENST00000512476 ODR4Q5SWX8 454 aa8.13□□□□□ -1.11
TRAPPC11-209ENST00000512476 PIK3CDO00329 1044 aa8.13□□□□□ -1.11
TRAPPC11-209ENST00000512476 PRC1O43663 620 aa8.13□□□□□ -1.11
TRAPPC11-209ENST00000512476 FANCCQ00597 558 aa8.13□□□□□ -1.11
TRAPPC11-209ENST00000512476 DHX8Q14562 1220 aaKnown RBP8.13□□□□□ -1.11
TRAPPC11-209ENST00000512476 CRTC2Q53ET0 693 aaPredicted RBP8.13□□□□□ -1.11
TRAPPC11-209ENST00000512476 RTL5Q5HYW3 569 aaPredicted RBP8.13□□□□□ -1.11
TRAPPC11-209ENST00000512476 TTC39BQ5VTQ0 682 aaPredicted RBP8.13□□□□□ -1.11
TRAPPC11-209ENST00000512476 CACTIN-AS1Q8N1I8 211 aa8.13□□□□□ -1.11
TRAPPC11-209ENST00000512476 ZNF710Q8N1W2 664 aa8.13□□□□□ -1.11
TRAPPC11-209ENST00000512476 PNISRQ8TF01 805 aaKnown RBP8.13□□□□□ -1.11
TRAPPC11-209ENST00000512476 ZBTB12Q9Y330 459 aaPredicted RBP8.13□□□□□ -1.11
TRAPPC11-209ENST00000512476 WIZO95785 1651 aa8.13□□□□□ -1.11
TRAPPC11-209ENST00000512476 RPGRIP1LQ68CZ1 1315 aa8.13□□□□□ -1.11
TRAPPC11-209ENST00000512476 HMGB1P1B2RPK0 211 aaPredicted RBP8.12□□□□□ -1.11
TRAPPC11-209ENST00000512476 CAPN15O75808 1086 aa8.12□□□□□ -1.11
TRAPPC11-209ENST00000512476 TMEM87AQ8NBN3 555 aa8.12□□□□□ -1.11
TRAPPC11-209ENST00000512476 CREBZFQ9NS37 354 aa8.12□□□□□ -1.11
TRAPPC11-209ENST00000512476 MAPK1P28482 360 aa8.12□□□□□ -1.11
TRAPPC11-209ENST00000512476 ARMCX6Q7L4S7 300 aa8.12□□□□□ -1.11
TRAPPC11-209ENST00000512476 H3BRB1 525 aa8.11□□□□□ -1.11
TRAPPC11-209ENST00000512476 LDHAP00338 332 aaKnown RBP8.11□□□□□ -1.11
TRAPPC11-209ENST00000512476 PDGFRBP09619 1106 aa8.11□□□□□ -1.11
TRAPPC11-209ENST00000512476 MTMR3Q13615 1198 aa8.11□□□□□ -1.11
TRAPPC11-209ENST00000512476 DSG2Q14126 1118 aa8.11□□□□□ -1.11
TRAPPC11-209ENST00000512476 ECM1Q16610 540 aa8.11□□□□□ -1.11
TRAPPC11-209ENST00000512476 CCAR1Q8IX12 1150 aaKnown RBP8.11□□□□□ -1.11
TRAPPC11-209ENST00000512476 SCYL1Q96KG9 808 aa8.11□□□□□ -1.11
TRAPPC11-209ENST00000512476 TUT1Q9H6E5 874 aaKnown RBP8.11□□□□□ -1.11
TRAPPC11-209ENST00000512476 TCEAL9Q9UHQ7 104 aa8.11□□□□□ -1.11
TRAPPC11-209ENST00000512476 SALL2Q9Y467 1007 aaPredicted RBP8.11□□□□□ -1.11
TRAPPC11-209ENST00000512476 ABL1P00519 1130 aa8.11□□□□□ -1.11
TRAPPC11-209ENST00000512476 SYCP2LQ5T4T6 812 aa8.11□□□□□ -1.11
TRAPPC11-209ENST00000512476 ZCRB1Q8TBF4 217 aaKnown RBP8.11□□□□□ -1.11
TRAPPC11-209ENST00000512476 EPS8L1Q8TE68 723 aa8.11□□□□□ -1.11
TRAPPC11-209ENST00000512476 KANSL2Q9H9L4 492 aa8.11□□□□□ -1.11
TRAPPC11-209ENST00000512476 UBE4AQ14139 1066 aa8.1□□□□□ -1.11
TRAPPC11-209ENST00000512476 NEUROD6Q96NK8 337 aa8.1□□□□□ -1.11
TRAPPC11-209ENST00000512476 BRINP2Q9C0B6 783 aa8.1□□□□□ -1.11
TRAPPC11-209ENST00000512476 DHX16O60231 1041 aaKnown RBP8.1□□□□□ -1.11
TRAPPC11-209ENST00000512476 GIGYF1O75420 1035 aaPredicted RBP8.1□□□□□ -1.11
TRAPPC11-209ENST00000512476 CXorf38Q8TB03 319 aa8.1□□□□□ -1.11
TRAPPC11-209ENST00000512476 CTDP1Q9Y5B0 961 aaPredicted RBP8.1□□□□□ -1.11
TRAPPC11-209ENST00000512476 PCDHB15Q9Y5E8 787 aa8.1□□□□□ -1.11
TRAPPC11-209ENST00000512476 LIG1P18858 919 aa8.09□□□□□ -1.11
TRAPPC11-209ENST00000512476 CCDC96Q2M329 555 aa8.09□□□□□ -1.11
TRAPPC11-209ENST00000512476 WDR75Q8IWA0 830 aaKnown RBP8.09□□□□□ -1.11
TRAPPC11-209ENST00000512476 SENP7Q9BQF6 1050 aa8.09□□□□□ -1.11
TRAPPC11-209ENST00000512476 CDHR5Q9HBB8 845 aa8.09□□□□□ -1.11
TRAPPC11-209ENST00000512476 ZKSCAN2Q63HK3 967 aa8.09□□□□□ -1.11
TRAPPC11-209ENST00000512476 TTC30BQ8N4P2 665 aa8.09□□□□□ -1.11
TRAPPC11-209ENST00000512476 C1orf131Q8NDD1 294 aaKnown RBP8.09□□□□□ -1.11
TRAPPC11-209ENST00000512476 ATL2Q8NHH9 583 aa8.09□□□□□ -1.11
TRAPPC11-209ENST00000512476 CCDC85AQ96PX6 553 aaPredicted RBP8.09□□□□□ -1.11
TRAPPC11-209ENST00000512476 ARPC5LQ9BPX5 153 aa8.09□□□□□ -1.11
TRAPPC11-209ENST00000512476 CCSER2Q9H7U1 834 aa8.09□□□□□ -1.11
TRAPPC11-209ENST00000512476 TPX2Q9ULW0 747 aaKnown RBP8.09□□□□□ -1.11
TRAPPC11-209ENST00000512476 PCDHGB7Q9Y5F8 929 aa8.09□□□□□ -1.11
TRAPPC11-209ENST00000512476 NDUFB9Q9Y6M9 179 aa8.09□□□□□ -1.11
TRAPPC11-209ENST00000512476 SETD1BQ9UPS6 1966 aaKnown RBP8.08□□□□□ -1.12
TRAPPC11-209ENST00000512476 PHF14O94880 888 aa8.08□□□□□ -1.12
TRAPPC11-209ENST00000512476 P4HBP07237 508 aaKnown RBP8.08□□□□□ -1.12
TRAPPC11-209ENST00000512476 RIC3Q7Z5B4 369 aa8.08□□□□□ -1.12
TRAPPC11-209ENST00000512476 DEPDC4Q8N2C3 294 aa8.08□□□□□ -1.12
TRAPPC11-209ENST00000512476 GMLQ99445 158 aa8.08□□□□□ -1.12
TRAPPC11-209ENST00000512476 INO80BQ9C086 356 aaPredicted RBP8.08□□□□□ -1.12
TRAPPC11-209ENST00000512476 BSDC1Q9NW68 430 aaPredicted RBP8.08□□□□□ -1.12
TRAPPC11-209ENST00000512476 FAM163BP0C2L3 166 aa8.08□□□□□ -1.12
TRAPPC11-209ENST00000512476 USP48Q86UV5 1035 aa8.08□□□□□ -1.12
TRAPPC11-209ENST00000512476 ASB16Q96NS5 453 aa8.08□□□□□ -1.12
TRAPPC11-209ENST00000512476 ELOAQ14241 798 aaKnown RBP8.07□□□□□ -1.12
TRAPPC11-209ENST00000512476 SLC43A3Q8NBI5 491 aa8.07□□□□□ -1.12
TRAPPC11-209ENST00000512476 EID1Q9Y6B2 187 aa8.07□□□□□ -1.12
TRAPPC11-209ENST00000512476 DNAJC6O75061 913 aa8.07□□□□□ -1.12
TRAPPC11-209ENST00000512476 WASHC4Q2M389 1173 aa8.07□□□□□ -1.12
TRAPPC11-209ENST00000512476 L3MBTL3Q96JM7 780 aaPredicted RBP8.07□□□□□ -1.12
TRAPPC11-209ENST00000512476 TGIF2Q9GZN2 237 aa8.07□□□□□ -1.12
TRAPPC11-209ENST00000512476 SWAP70Q9UH65 585 aa8.07□□□□□ -1.12
TRAPPC11-209ENST00000512476 PEG3Q9GZU2 1588 aa8.07□□□□□ -1.12
TRAPPC11-209ENST00000512476 ATP2B4P23634 1241 aa8.06□□□□□ -1.12
TRAPPC11-209ENST00000512476 GNALP38405 381 aa8.06□□□□□ -1.12
TRAPPC11-209ENST00000512476 EAPPQ56P03 285 aaPredicted RBP8.06□□□□□ -1.12
TRAPPC11-209ENST00000512476 C10orf62Q5T681 223 aaPredicted RBP8.06□□□□□ -1.12
TRAPPC11-209ENST00000512476 MCF2L2Q86YR7 1114 aa8.06□□□□□ -1.12
TRAPPC11-209ENST00000512476 ENOX1Q8TC92 643 aaKnown RBP8.06□□□□□ -1.12
TRAPPC11-209ENST00000512476 NPDC1Q9NQX5 325 aaPredicted RBP8.06□□□□□ -1.12
TRAPPC11-209ENST00000512476 ATP9BO43861 1147 aa8.06□□□□□ -1.12
TRAPPC11-209ENST00000512476 XPCQ01831 940 aaPredicted RBP8.06□□□□□ -1.12
TRAPPC11-209ENST00000512476 LRRC41Q15345 812 aa8.06□□□□□ -1.12
TRAPPC11-209ENST00000512476 ZNF394Q53GI3 561 aa8.06□□□□□ -1.12
TRAPPC11-209ENST00000512476 PAGR1Q9BTK6 254 aa8.06□□□□□ -1.12
TRAPPC11-209ENST00000512476 FAM126AQ9BYI3 521 aaPredicted RBP8.06□□□□□ -1.12
TRAPPC11-209ENST00000512476 PRM3Q9NNZ6 103 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms