RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 SH3RF1Q7Z6J0 888 aa10.85□□□□□ -0.67
GYPB-212ENST00000511198 ADGRL1O94910 1474 aa10.85□□□□□ -0.67
GYPB-212ENST00000511198 ZNF787Q6DD87 383 aa10.84□□□□□ -0.67
GYPB-212ENST00000511198 NR6A1Q15406 480 aa10.83□□□□□ -0.68
GYPB-212ENST00000511198 NBPF14Q5TI25 921 aa10.83□□□□□ -0.68
GYPB-212ENST00000511198 SH3BP5LQ7L8J4 393 aa10.83□□□□□ -0.68
GYPB-212ENST00000511198 BPHLQ86WA6 291 aaPredicted RBP10.83□□□□□ -0.68
GYPB-212ENST00000511198 FAM174AQ8TBP5 190 aa10.83□□□□□ -0.68
GYPB-212ENST00000511198 HMX1Q9NP08 348 aaPredicted RBP10.83□□□□□ -0.68
GYPB-212ENST00000511198 MROH2BQ7Z745 1585 aa10.82□□□□□ -0.68
GYPB-212ENST00000511198 USP17L8P0C7I0 530 aa10.82□□□□□ -0.68
GYPB-212ENST00000511198 CDK15Q96Q40 435 aa10.82□□□□□ -0.68
GYPB-212ENST00000511198 WASF2Q9Y6W5 498 aa10.82□□□□□ -0.68
GYPB-212ENST00000511198 KDM6BO15054 1643 aa10.81□□□□□ -0.68
GYPB-212ENST00000511198 AGERQ15109 404 aa10.81□□□□□ -0.68
GYPB-212ENST00000511198 EPS8L1Q8TE68 723 aa10.81□□□□□ -0.68
GYPB-212ENST00000511198 GPKOWQ92917 476 aaPredicted RBP eCLIP10.81□□□□□ -0.68
GYPB-212ENST00000511198 C1QTNF2Q9BXJ5 285 aa10.81□□□□□ -0.68
GYPB-212ENST00000511198 FKBPLQ9UIM3 349 aa10.81□□□□□ -0.68
GYPB-212ENST00000511198 TMEM259Q4ZIN3 620 aa10.79□□□□□ -0.68
GYPB-212ENST00000511198 FAM69CQ0P6D2 419 aa10.78□□□□□ -0.68
GYPB-212ENST00000511198 PDXDC2PQ6P474 469 aa10.78□□□□□ -0.68
GYPB-212ENST00000511198 SYNJ1O43426 1573 aa10.77□□□□□ -0.68
GYPB-212ENST00000511198 ADH1CP00326 375 aa10.77□□□□□ -0.69
GYPB-212ENST00000511198 NNTQ13423 1086 aa10.77□□□□□ -0.69
GYPB-212ENST00000511198 GRM5P41594 1212 aa10.76□□□□□ -0.69
GYPB-212ENST00000511198 TRMT44Q8IYL2 757 aaKnown RBP10.76□□□□□ -0.69
GYPB-212ENST00000511198 ATP13A2Q9NQ11 1180 aa10.76□□□□□ -0.69
GYPB-212ENST00000511198 GMPR2Q9P2T1 348 aaKnown RBP10.76□□□□□ -0.69
GYPB-212ENST00000511198 ZC3H4Q9UPT8 1303 aaKnown RBP10.76□□□□□ -0.69
GYPB-212ENST00000511198 TARBP1Q13395 1621 aaKnown RBP10.76□□□□□ -0.69
GYPB-212ENST00000511198 TOPBP1Q92547 1522 aa10.75□□□□□ -0.69
GYPB-212ENST00000511198 MAGEB6P1A0A0J9YX57 407 aa10.75□□□□□ -0.69
GYPB-212ENST00000511198 ARID5BQ14865 1188 aa10.75□□□□□ -0.69
GYPB-212ENST00000511198 OCSTAMPQ9BR26 566 aa10.75□□□□□ -0.69
GYPB-212ENST00000511198 TRIM34Q9BYJ4 488 aa10.75□□□□□ -0.69
GYPB-212ENST00000511198 ERFEQ4G0M1 354 aa10.74□□□□□ -0.69
GYPB-212ENST00000511198 CHMP7Q8WUX9 453 aaPredicted RBP10.74□□□□□ -0.69
GYPB-212ENST00000511198 KLF16Q9BXK1 252 aaPredicted RBP10.74□□□□□ -0.69
GYPB-212ENST00000511198 CAPN5O15484 640 aaPredicted RBP10.73□□□□□ -0.69
GYPB-212ENST00000511198 ARHGAP9Q9BRR9 750 aa10.73□□□□□ -0.69
GYPB-212ENST00000511198 CARD14Q9BXL6 1004 aa10.73□□□□□ -0.69
GYPB-212ENST00000511198 ABCC10Q5T3U5 1492 aa10.73□□□□□ -0.69
GYPB-212ENST00000511198 NR3C2P08235 984 aa10.72□□□□□ -0.69
GYPB-212ENST00000511198 NR5A1Q13285 461 aa10.72□□□□□ -0.69
GYPB-212ENST00000511198 GJD4Q96KN9 370 aaPredicted RBP10.72□□□□□ -0.69
GYPB-212ENST00000511198 MAP4K5Q9Y4K4 846 aa10.72□□□□□ -0.69
GYPB-212ENST00000511198 SNAPC4Q5SXM2 1469 aa10.7□□□□□ -0.7
GYPB-212ENST00000511198 TIMP2P16035 220 aa10.7□□□□□ -0.7
GYPB-212ENST00000511198 BANK1Q8NDB2 785 aa10.7□□□□□ -0.7
GYPB-212ENST00000511198 GPSM3Q9Y4H4 160 aa10.7□□□□□ -0.7
GYPB-212ENST00000511198 PTK2Q05397 1052 aa10.69□□□□□ -0.7
GYPB-212ENST00000511198 TRIM46Q7Z4K8 759 aa10.69□□□□□ -0.7
GYPB-212ENST00000511198 ZNF775Q96BV0 537 aaPredicted RBP10.69□□□□□ -0.7
GYPB-212ENST00000511198 C11orf95C9JLR9 678 aaPredicted RBP10.68□□□□□ -0.7
GYPB-212ENST00000511198 BMP1P13497 986 aa10.68□□□□□ -0.7
GYPB-212ENST00000511198 WDR4P57081 412 aaKnown RBP10.68□□□□□ -0.7
GYPB-212ENST00000511198 VASH1Q7L8A9 365 aaPredicted RBP10.68□□□□□ -0.7
GYPB-212ENST00000511198 SPATA31D1Q6ZQQ2 1576 aa10.68□□□□□ -0.7
GYPB-212ENST00000511198 TDRD9Q8NDG6 1382 aaKnown RBP10.67□□□□□ -0.7
GYPB-212ENST00000511198 ZBTB33Q86T24 672 aa10.67□□□□□ -0.7
GYPB-212ENST00000511198 PNMA1Q8ND90 353 aa10.67□□□□□ -0.7
GYPB-212ENST00000511198 ADAM32Q8TC27 787 aa10.67□□□□□ -0.7
GYPB-212ENST00000511198 FSHRP23945 695 aa10.66□□□□□ -0.7
GYPB-212ENST00000511198 MTMR14Q8NCE2 650 aa10.66□□□□□ -0.7
GYPB-212ENST00000511198 ITPKCQ96DU7 683 aa10.66□□□□□ -0.7
GYPB-212ENST00000511198 TRIM47Q96LD4 638 aa10.66□□□□□ -0.7
GYPB-212ENST00000511198 SNRPBP14678 240 aaKnown RBP10.65□□□□□ -0.7
GYPB-212ENST00000511198 ZFAND3Q9H8U3 227 aa10.65□□□□□ -0.7
GYPB-212ENST00000511198 SENP2Q9HC62 589 aa10.65□□□□□ -0.7
GYPB-212ENST00000511198 SNRKQ9NRH2 765 aa10.65□□□□□ -0.7
GYPB-212ENST00000511198 DIP2BQ9P265 1576 aa10.65□□□□□ -0.71
GYPB-212ENST00000511198 ZIC2O95409 532 aaPredicted RBP10.64□□□□□ -0.71
GYPB-212ENST00000511198 SLC10A4Q96EP9 437 aa10.64□□□□□ -0.71
GYPB-212ENST00000511198 TSPOAP1O95153 1857 aa10.64□□□□□ -0.71
GYPB-212ENST00000511198 WIZO95785 1651 aa10.63□□□□□ -0.71
GYPB-212ENST00000511198 GPR37L1O60883 481 aa10.62□□□□□ -0.71
GYPB-212ENST00000511198 KIFC2Q96AC6 838 aa10.62□□□□□ -0.71
GYPB-212ENST00000511198 KCTD15Q96SI1 283 aaPredicted RBP10.62□□□□□ -0.71
GYPB-212ENST00000511198 CDV3Q9UKY7 258 aaKnown RBP10.62□□□□□ -0.71
GYPB-212ENST00000511198 MRPL14Q6P1L8 145 aaKnown RBP10.61□□□□□ -0.71
GYPB-212ENST00000511198 CCDC116Q8IYX3 515 aa10.61□□□□□ -0.71
GYPB-212ENST00000511198 RAD54L2Q9Y4B4 1467 aa10.61□□□□□ -0.71
GYPB-212ENST00000511198 ZFP42Q96MM3 310 aa10.6□□□□□ -0.71
GYPB-212ENST00000511198 ABCC8Q09428 1581 aa10.6□□□□□ -0.71
GYPB-212ENST00000511198 EMILIN1Q9Y6C2 1016 aa10.59□□□□□ -0.71
GYPB-212ENST00000511198 MAGI1Q96QZ7 1491 aaPredicted RBP10.59□□□□□ -0.71
GYPB-212ENST00000511198 DNMBPQ6XZF7 1577 aa10.58□□□□□ -0.72
GYPB-212ENST00000511198 POLA1P09884 1462 aaPredicted RBP10.58□□□□□ -0.72
GYPB-212ENST00000511198 ZBBXA8MT70 800 aa10.58□□□□□ -0.72
GYPB-212ENST00000511198 FBXO45P0C2W1 286 aa10.58□□□□□ -0.72
GYPB-212ENST00000511198 INTS6LQ5JSJ4 861 aaKnown RBP10.58□□□□□ -0.72
GYPB-212ENST00000511198 PPP1R26Q5T8A7 1209 aaPredicted RBP10.58□□□□□ -0.72
GYPB-212ENST00000511198 PRDM2Q13029 1718 aa10.58□□□□□ -0.72
GYPB-212ENST00000511198 DZIP3Q86Y13 1208 aaKnown RBP10.57□□□□□ -0.72
GYPB-212ENST00000511198 PURBQ96QR8 312 aaKnown RBP10.57□□□□□ -0.72
GYPB-212ENST00000511198 CEP170Q5SW79 1584 aa10.56□□□□□ -0.72
GYPB-212ENST00000511198 MEIOBQ8N635 442 aa10.56□□□□□ -0.72
GYPB-212ENST00000511198 NDUFB9Q9Y6M9 179 aa10.56□□□□□ -0.72
GYPB-212ENST00000511198 MAPKBP1O60336 1514 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms