RNA–Protein interactions for RNA: ENST00000510951.5

NR1I3-227, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 774 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-227ENST00000510951 USP21Q9UK80 565 aa14.2□□□□□ -0.14
NR1I3-227ENST00000510951 AATKQ6ZMQ8 1374 aa14.2□□□□□ -0.14
NR1I3-227ENST00000510951 NPC1L1Q9UHC9 1359 aa14.19□□□□□ -0.14
NR1I3-227ENST00000510951 COL5A2P05997 1499 aaPredicted RBP14.18□□□□□ -0.14
NR1I3-227ENST00000510951 WNK3Q9BYP7 1800 aa14.18□□□□□ -0.14
NR1I3-227ENST00000510951 FAM208AQ9UK61 1670 aaKnown RBP14.18□□□□□ -0.14
NR1I3-227ENST00000510951 FNBP4Q8N3X1 1017 aaPredicted RBP14.18□□□□□ -0.14
NR1I3-227ENST00000510951 STRN4Q9NRL3 753 aa14.18□□□□□ -0.14
NR1I3-227ENST00000510951 RGS17Q9UGC6 210 aaPredicted RBP14.18□□□□□ -0.14
NR1I3-227ENST00000510951 PPM1GO15355 546 aaPredicted RBP14.17□□□□□ -0.14
NR1I3-227ENST00000510951 AMPHP49418 695 aa14.17□□□□□ -0.14
NR1I3-227ENST00000510951 ZNF772Q68DY9 489 aaPredicted RBP14.17□□□□□ -0.14
NR1I3-227ENST00000510951 UNC5CLQ8IV45 518 aa14.17□□□□□ -0.14
NR1I3-227ENST00000510951 EMILIN1Q9Y6C2 1016 aa14.17□□□□□ -0.14
NR1I3-227ENST00000510951 RTL1A6NKG5 1358 aa14.17□□□□□ -0.14
NR1I3-227ENST00000510951 ATRNO75882 1429 aa14.16□□□□□ -0.14
NR1I3-227ENST00000510951 PIAS4Q8N2W9 510 aaPredicted RBP14.16□□□□□ -0.14
NR1I3-227ENST00000510951 AXIN2Q9Y2T1 843 aa14.16□□□□□ -0.14
NR1I3-227ENST00000510951 GLI3P10071 1580 aa14.16□□□□□ -0.14
NR1I3-227ENST00000510951 BLMP54132 1417 aaPredicted RBP14.15□□□□□ -0.14
NR1I3-227ENST00000510951 FLT4P35916 1363 aa14.15□□□□□ -0.14
NR1I3-227ENST00000510951 HOXC9P31274 260 aa14.15□□□□□ -0.14
NR1I3-227ENST00000510951 CCDC9Q9Y3X0 531 aaKnown RBP14.15□□□□□ -0.14
NR1I3-227ENST00000510951 SMG6Q86US8 1419 aaKnown RBP14.15□□□□□ -0.14
NR1I3-227ENST00000510951 CDK12Q9NYV4 1490 aaPredicted RBP14.14□□□□□ -0.15
NR1I3-227ENST00000510951 EVA1CP58658 441 aa14.14□□□□□ -0.15
NR1I3-227ENST00000510951 POTEAQ6S8J7 498 aa14.14□□□□□ -0.15
NR1I3-227ENST00000510951 LTV1Q96GA3 475 aaPredicted RBP14.14□□□□□ -0.15
NR1I3-227ENST00000510951 POLKQ9UBT6 870 aa14.14□□□□□ -0.15
NR1I3-227ENST00000510951 CSB-PGBD3P0DP91 1061 aa14.13□□□□□ -0.15
NR1I3-227ENST00000510951 LARP1Q6PKG0 1096 aaKnown RBP14.13□□□□□ -0.15
NR1I3-227ENST00000510951 IP6K1Q92551 441 aa14.13□□□□□ -0.15
NR1I3-227ENST00000510951 QTRT2Q9H974 415 aaKnown RBP14.13□□□□□ -0.15
NR1I3-227ENST00000510951 TRPC5Q9UL62 973 aaPredicted RBP14.13□□□□□ -0.15
NR1I3-227ENST00000510951 PARD3Q8TEW0 1356 aa14.12□□□□□ -0.15
NR1I3-227ENST00000510951 ANKRD24Q8TF21 1146 aa14.12□□□□□ -0.15
NR1I3-227ENST00000510951 ERBB3P21860 1342 aa14.12□□□□□ -0.15
NR1I3-227ENST00000510951 KIF24Q5T7B8 1368 aa14.11□□□□□ -0.15
NR1I3-227ENST00000510951 BRWD3Q6RI45 1802 aa14.11□□□□□ -0.15
NR1I3-227ENST00000510951 CRB1P82279 1406 aa14.11□□□□□ -0.15
NR1I3-227ENST00000510951 VPS72Q15906 364 aa14.11□□□□□ -0.15
NR1I3-227ENST00000510951 HSP90AB2PQ58FF8 381 aa14.11□□□□□ -0.15
NR1I3-227ENST00000510951 USP35Q9P2H5 1018 aa14.11□□□□□ -0.15
NR1I3-227ENST00000510951 WDR17Q8IZU2 1322 aa14.11□□□□□ -0.15
NR1I3-227ENST00000510951 INSRP06213 1382 aa14.1□□□□□ -0.15
NR1I3-227ENST00000510951 TOM1L2Q6ZVM7 507 aa14.1□□□□□ -0.15
NR1I3-227ENST00000510951 SPATA31A5Q5VU36 1347 aa14.1□□□□□ -0.15
NR1I3-227ENST00000510951 SPATA31A7Q8IWB4 1347 aa14.1□□□□□ -0.15
NR1I3-227ENST00000510951 MTHFSP49914 203 aa14.09□□□□□ -0.15
NR1I3-227ENST00000510951 GJD4Q96KN9 370 aaPredicted RBP14.09□□□□□ -0.15
NR1I3-227ENST00000510951 THSD7AQ9UPZ6 1657 aa14.09□□□□□ -0.15
NR1I3-227ENST00000510951 SPATA31A1Q5TZJ5 1347 aa14.09□□□□□ -0.15
NR1I3-227ENST00000510951 RGPD1P0DJD0 1748 aa14.08□□□□□ -0.16
NR1I3-227ENST00000510951 RXRBP28702 533 aa14.08□□□□□ -0.16
NR1I3-227ENST00000510951 PPP2R1AP30153 589 aa14.08□□□□□ -0.16
NR1I3-227ENST00000510951 NLRP2Q9NX02 1062 aa14.08□□□□□ -0.16
NR1I3-227ENST00000510951 LRRC37A3O60309 1634 aa14.08□□□□□ -0.16
NR1I3-227ENST00000510951 RGS12O14924 1447 aa14.07□□□□□ -0.16
NR1I3-227ENST00000510951 PARP4Q9UKK3 1724 aaKnown RBP14.07□□□□□ -0.16
NR1I3-227ENST00000510951 COL3A1P02461 1466 aaPredicted RBP14.07□□□□□ -0.16
NR1I3-227ENST00000510951 A0A0G2JS52 829 aa14.07□□□□□ -0.16
NR1I3-227ENST00000510951 RBM6P78332 1123 aaKnown RBP14.07□□□□□ -0.16
NR1I3-227ENST00000510951 MYT1Q01538 1121 aa14.07□□□□□ -0.16
NR1I3-227ENST00000510951 FAM98CQ17RN3 349 aaKnown RBP14.06□□□□□ -0.16
NR1I3-227ENST00000510951 USHBP1Q8N6Y0 703 aa14.06□□□□□ -0.16
NR1I3-227ENST00000510951 EIF4A2Q14240 407 aaKnown RBP14.05□□□□□ -0.16
NR1I3-227ENST00000510951 RALBP1Q15311 655 aa14.05□□□□□ -0.16
NR1I3-227ENST00000510951 TCP11L2Q8N4U5 519 aa14.05□□□□□ -0.16
NR1I3-227ENST00000510951 CARD10Q9BWT7 1032 aa14.04□□□□□ -0.16
NR1I3-227ENST00000510951 PRKRIP1Q9H875 184 aaPredicted RBP14.04□□□□□ -0.16
NR1I3-227ENST00000510951 SHANK3Q9BYB0 1731 aa14.04□□□□□ -0.16
NR1I3-227ENST00000510951 NBPF6Q5VWK0 638 aa14.03□□□□□ -0.16
NR1I3-227ENST00000510951 NBPF4Q96M43 638 aa14.03□□□□□ -0.16
NR1I3-227ENST00000510951 MYBBP1AQ9BQG0 1328 aaKnown RBP14.03□□□□□ -0.16
NR1I3-227ENST00000510951 MEGF6O75095 1541 aa14.02□□□□□ -0.16
NR1I3-227ENST00000510951 DISP2A7MBM2 1401 aa14.02□□□□□ -0.16
NR1I3-227ENST00000510951 ANP32CO43423 234 aa14.01□□□□□ -0.17
NR1I3-227ENST00000510951 CFAP53Q96M91 514 aa14.01□□□□□ -0.17
NR1I3-227ENST00000510951 EYA1Q99502 592 aa14.01□□□□□ -0.17
NR1I3-227ENST00000510951 THRAP3Q9Y2W1 955 aaKnown RBP14.01□□□□□ -0.17
NR1I3-227ENST00000510951 PKD1L3Q7Z443 1732 aa14.01□□□□□ -0.17
NR1I3-227ENST00000510951 NCAPD2Q15021 1401 aa14□□□□□ -0.17
NR1I3-227ENST00000510951 DIAPH1O60610 1272 aaKnown RBP14□□□□□ -0.17
NR1I3-227ENST00000510951 IL13P35225 146 aa14□□□□□ -0.17
NR1I3-227ENST00000510951 BARGINQ6ZT62 677 aa14□□□□□ -0.17
NR1I3-227ENST00000510951 ILDR2Q71H61 639 aa14□□□□□ -0.17
NR1I3-227ENST00000510951 SEPT12Q8IYM1 358 aa14□□□□□ -0.17
NR1I3-227ENST00000510951 IGSF1Q8N6C5 1336 aa13.99□□□□□ -0.17
NR1I3-227ENST00000510951 TNS2Q63HR2 1409 aa13.98□□□□□ -0.17
NR1I3-227ENST00000510951 U2SURPO15042 1029 aaKnown RBP13.98□□□□□ -0.17
NR1I3-227ENST00000510951 IL2RBP14784 551 aa13.98□□□□□ -0.17
NR1I3-227ENST00000510951 AEBP1Q8IUX7 1158 aa13.98□□□□□ -0.17
NR1I3-227ENST00000510951 KAT6BQ8WYB5 2073 aa13.98□□□□□ -0.17
NR1I3-227ENST00000510951 OVOS2A0A0G2JMS6 1433 aa13.98□□□□□ -0.17
NR1I3-227ENST00000510951 VIRMAQ69YN4 1812 aaKnown RBP13.97□□□□□ -0.17
NR1I3-227ENST00000510951 ONECUT3O60422 494 aaPredicted RBP13.96□□□□□ -0.17
NR1I3-227ENST00000510951 HMOX1P09601 288 aa13.96□□□□□ -0.17
NR1I3-227ENST00000510951 SULT6B1Q6IMI4 303 aa13.96□□□□□ -0.17
NR1I3-227ENST00000510951 RAPGEF4Q8WZA2 1011 aa13.96□□□□□ -0.17
NR1I3-227ENST00000510951 SBF2Q86WG5 1849 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms