RNA–Protein interactions for RNA: ENST00000485403.6

ERCC2-205, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC2, Length 1,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-205ENST00000485403 POTEAQ6S8J7 498 aa25.14■■□□□ 1.62
ERCC2-205ENST00000485403 MAP2P11137 1827 aaKnown RBP25.13■■□□□ 1.61
ERCC2-205ENST00000485403 MAP3K19Q56UN5 1328 aa25.12■■□□□ 1.61
ERCC2-205ENST00000485403 FBLN1P23142 703 aa25.12■■□□□ 1.61
ERCC2-205ENST00000485403 TRPC5Q9UL62 973 aaPredicted RBP25.12■■□□□ 1.61
ERCC2-205ENST00000485403 COL5A2P05997 1499 aaPredicted RBP25.11■■□□□ 1.61
ERCC2-205ENST00000485403 CC2D1BQ5T0F9 858 aaKnown RBP25.11■■□□□ 1.61
ERCC2-205ENST00000485403 PRKRIP1Q9H875 184 aaPredicted RBP25.11■■□□□ 1.61
ERCC2-205ENST00000485403 QTRT2Q9H974 415 aaKnown RBP25.11■■□□□ 1.61
ERCC2-205ENST00000485403 AXIN2Q9Y2T1 843 aa25.11■■□□□ 1.61
ERCC2-205ENST00000485403 ZBTB7CA1YPR0 619 aa25.1■■□□□ 1.61
ERCC2-205ENST00000485403 VPS72Q15906 364 aa25.09■■□□□ 1.61
ERCC2-205ENST00000485403 PEAK1Q9H792 1746 aa25.08■■□□□ 1.61
ERCC2-205ENST00000485403 RTL1A6NKG5 1358 aa25.08■■□□□ 1.61
ERCC2-205ENST00000485403 RRS1Q15050 365 aaKnown RBP25.07■■□□□ 1.6
ERCC2-205ENST00000485403 KIF24Q5T7B8 1368 aa25.07■■□□□ 1.6
ERCC2-205ENST00000485403 BLMP54132 1417 aaPredicted RBP25.07■■□□□ 1.6
ERCC2-205ENST00000485403 MORC1Q86VD1 984 aa25.07■■□□□ 1.6
ERCC2-205ENST00000485403 IP6K1Q92551 441 aa25.07■■□□□ 1.6
ERCC2-205ENST00000485403 RALBP1Q15311 655 aa25.06■■□□□ 1.6
ERCC2-205ENST00000485403 GLI3P10071 1580 aa25.06■■□□□ 1.6
ERCC2-205ENST00000485403 HOXC9P31274 260 aa25.04■■□□□ 1.6
ERCC2-205ENST00000485403 RBM6P78332 1123 aaKnown RBP25.04■■□□□ 1.6
ERCC2-205ENST00000485403 GJD4Q96KN9 370 aaPredicted RBP25.04■■□□□ 1.6
ERCC2-205ENST00000485403 STRN4Q9NRL3 753 aa25.04■■□□□ 1.6
ERCC2-205ENST00000485403 SMG6Q86US8 1419 aaKnown RBP25.03■■□□□ 1.6
ERCC2-205ENST00000485403 SPATA31A5Q5VU36 1347 aa25.03■■□□□ 1.6
ERCC2-205ENST00000485403 SPATA31A7Q8IWB4 1347 aa25.03■■□□□ 1.6
ERCC2-205ENST00000485403 FLT4P35916 1363 aa25.03■■□□□ 1.6
ERCC2-205ENST00000485403 RXRBP28702 533 aa25.02■■□□□ 1.6
ERCC2-205ENST00000485403 TNNT2P45379 298 aaPredicted RBP25.02■■□□□ 1.6
ERCC2-205ENST00000485403 AMPHP49418 695 aa25.02■■□□□ 1.6
ERCC2-205ENST00000485403 EVA1CP58658 441 aa25.02■■□□□ 1.6
ERCC2-205ENST00000485403 POLKQ9UBT6 870 aa25.02■■□□□ 1.6
ERCC2-205ENST00000485403 EMILIN1Q9Y6C2 1016 aa25.02■■□□□ 1.6
ERCC2-205ENST00000485403 PARD3Q8TEW0 1356 aa25.02■■□□□ 1.6
ERCC2-205ENST00000485403 LARP1Q6PKG0 1096 aaKnown RBP25.02■■□□□ 1.6
ERCC2-205ENST00000485403 ERBB3P21860 1342 aa25.01■■□□□ 1.59
ERCC2-205ENST00000485403 WDR17Q8IZU2 1322 aa25.01■■□□□ 1.59
ERCC2-205ENST00000485403 CDK12Q9NYV4 1490 aaPredicted RBP25.01■■□□□ 1.59
ERCC2-205ENST00000485403 CRB1P82279 1406 aa25■■□□□ 1.59
ERCC2-205ENST00000485403 SPATA31A1Q5TZJ5 1347 aa25■■□□□ 1.59
ERCC2-205ENST00000485403 FAM208AQ9UK61 1670 aaKnown RBP24.99■■□□□ 1.59
ERCC2-205ENST00000485403 INSRP06213 1382 aa24.99■■□□□ 1.59
ERCC2-205ENST00000485403 CCER2I3L3R5 266 aa24.97■■□□□ 1.59
ERCC2-205ENST00000485403 CCDC9Q9Y3X0 531 aaKnown RBP24.97■■□□□ 1.59
ERCC2-205ENST00000485403 HSP90AB2PQ58FF8 381 aa24.96■■□□□ 1.59
ERCC2-205ENST00000485403 ANKRD24Q8TF21 1146 aa24.96■■□□□ 1.59
ERCC2-205ENST00000485403 MYBBP1AQ9BQG0 1328 aaKnown RBP24.96■■□□□ 1.59
ERCC2-205ENST00000485403 ONECUT3O60422 494 aaPredicted RBP24.95■■□□□ 1.58
ERCC2-205ENST00000485403 RGS12O14924 1447 aa24.94■■□□□ 1.58
ERCC2-205ENST00000485403 TOM1L2Q6ZVM7 507 aa24.94■■□□□ 1.58
ERCC2-205ENST00000485403 RGPD2P0DJD1 1756 aa24.94■■□□□ 1.58
ERCC2-205ENST00000485403 PPM1GO15355 546 aaPredicted RBP24.93■■□□□ 1.58
ERCC2-205ENST00000485403 CSB-PGBD3P0DP91 1061 aa24.93■■□□□ 1.58
ERCC2-205ENST00000485403 CARD10Q9BWT7 1032 aa24.93■■□□□ 1.58
ERCC2-205ENST00000485403 THSD7AQ9UPZ6 1657 aa24.93■■□□□ 1.58
ERCC2-205ENST00000485403 WNK3Q9BYP7 1800 aa24.92■■□□□ 1.58
ERCC2-205ENST00000485403 ILDR2Q71H61 639 aa24.92■■□□□ 1.58
ERCC2-205ENST00000485403 THRAP3Q9Y2W1 955 aaKnown RBP24.92■■□□□ 1.58
ERCC2-205ENST00000485403 BARGINQ6ZT62 677 aa24.91■■□□□ 1.58
ERCC2-205ENST00000485403 TCP11L2Q8N4U5 519 aa24.91■■□□□ 1.58
ERCC2-205ENST00000485403 LTV1Q96GA3 475 aaPredicted RBP24.9■■□□□ 1.58
ERCC2-205ENST00000485403 USP35Q9P2H5 1018 aa24.9■■□□□ 1.58
ERCC2-205ENST00000485403 PPP2R1AP30153 589 aa24.89■■□□□ 1.57
ERCC2-205ENST00000485403 FAM98CQ17RN3 349 aaKnown RBP24.89■■□□□ 1.57
ERCC2-205ENST00000485403 MTHFSP49914 203 aa24.88■■□□□ 1.57
ERCC2-205ENST00000485403 NLRP2Q9NX02 1062 aa24.88■■□□□ 1.57
ERCC2-205ENST00000485403 BRWD3Q6RI45 1802 aa24.88■■□□□ 1.57
ERCC2-205ENST00000485403 PARP4Q9UKK3 1724 aaKnown RBP24.87■■□□□ 1.57
ERCC2-205ENST00000485403 DISP2A7MBM2 1401 aa24.86■■□□□ 1.57
ERCC2-205ENST00000485403 EP400Q96L91 3159 aa24.86■■□□□ 1.57
ERCC2-205ENST00000485403 CCDC184Q52MB2 194 aa24.85■■□□□ 1.57
ERCC2-205ENST00000485403 SEPT12Q8IYM1 358 aa24.85■■□□□ 1.57
ERCC2-205ENST00000485403 MRS2Q9HD23 443 aa24.85■■□□□ 1.57
ERCC2-205ENST00000485403 NCAPD2Q15021 1401 aa24.84■■□□□ 1.57
ERCC2-205ENST00000485403 EIF4A2Q14240 407 aaKnown RBP24.84■■□□□ 1.57
ERCC2-205ENST00000485403 NBPF6Q5VWK0 638 aa24.84■■□□□ 1.57
ERCC2-205ENST00000485403 NBPF4Q96M43 638 aa24.84■■□□□ 1.57
ERCC2-205ENST00000485403 COL3A1P02461 1466 aaPredicted RBP24.82■■□□□ 1.56
ERCC2-205ENST00000485403 RGPD1P0DJD0 1748 aa24.82■■□□□ 1.56
ERCC2-205ENST00000485403 CDCA7Q9BWT1 371 aaPredicted RBP24.81■■□□□ 1.56
ERCC2-205ENST00000485403 LRRC37A3O60309 1634 aa24.81■■□□□ 1.56
ERCC2-205ENST00000485403 EYA1Q99502 592 aa24.79■■□□□ 1.56
ERCC2-205ENST00000485403 IL13P35225 146 aa24.78■■□□□ 1.56
ERCC2-205ENST00000485403 IGSF1Q8N6C5 1336 aa24.78■■□□□ 1.56
ERCC2-205ENST00000485403 A0A0G2JS52 829 aa24.77■■□□□ 1.56
ERCC2-205ENST00000485403 MYT1Q01538 1121 aa24.77■■□□□ 1.56
ERCC2-205ENST00000485403 IL2RBP14784 551 aa24.76■■□□□ 1.55
ERCC2-205ENST00000485403 USHBP1Q8N6Y0 703 aa24.76■■□□□ 1.55
ERCC2-205ENST00000485403 MEGF6O75095 1541 aa24.75■■□□□ 1.55
ERCC2-205ENST00000485403 KRT27Q7Z3Y8 459 aa24.74■■□□□ 1.55
ERCC2-205ENST00000485403 TNS2Q63HR2 1409 aa24.73■■□□□ 1.55
ERCC2-205ENST00000485403 DIAPH1O60610 1272 aaKnown RBP24.73■■□□□ 1.55
ERCC2-205ENST00000485403 CFAP53Q96M91 514 aa24.73■■□□□ 1.55
ERCC2-205ENST00000485403 OVOS2A0A0G2JMS6 1433 aa24.72■■□□□ 1.55
ERCC2-205ENST00000485403 DDB1Q16531 1140 aa24.72■■□□□ 1.55
ERCC2-205ENST00000485403 KDRP35968 1356 aa24.72■■□□□ 1.55
ERCC2-205ENST00000485403 SHANK3Q9BYB0 1731 aa24.71■■□□□ 1.55
ERCC2-205ENST00000485403 PLEKHG2Q9H7P9 1386 aa24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms