RNA–Protein interactions for RNA: ENST00000479002.1

CAD-208, Transcript of carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase, humanhuman

TSL 5

Gene CAD, Length 614 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAD-208ENST00000479002 COL18A1P39060 1754 aa21.88■■□□□ 1.09
CAD-208ENST00000479002 LMO7Q8WWI1 1683 aa21.88■■□□□ 1.09
CAD-208ENST00000479002 CAMTA1Q9Y6Y1 1673 aa21.87■■□□□ 1.09
CAD-208ENST00000479002 FLT4P35916 1363 aa21.87■■□□□ 1.09
CAD-208ENST00000479002 AFF2P51816 1311 aa21.86■■□□□ 1.09
CAD-208ENST00000479002 MTHFSP49914 203 aa21.86■■□□□ 1.09
CAD-208ENST00000479002 BCL9LQ86UU0 1499 aa21.85■■□□□ 1.09
CAD-208ENST00000479002 BLMP54132 1417 aaPredicted RBP21.85■■□□□ 1.09
CAD-208ENST00000479002 INSRP06213 1382 aa21.85■■□□□ 1.09
CAD-208ENST00000479002 PEAK1Q9H792 1746 aa21.84■■□□□ 1.09
CAD-208ENST00000479002 PPM1GO15355 546 aaPredicted RBP21.84■■□□□ 1.09
CAD-208ENST00000479002 HSP90AB2PQ58FF8 381 aa21.84■■□□□ 1.09
CAD-208ENST00000479002 UNC5CLQ8IV45 518 aa21.84■■□□□ 1.09
CAD-208ENST00000479002 USP21Q9UK80 565 aa21.84■■□□□ 1.09
CAD-208ENST00000479002 LTN1O94822 1766 aa21.84■■□□□ 1.09
CAD-208ENST00000479002 ANP32CO43423 234 aa21.83■■□□□ 1.09
CAD-208ENST00000479002 MYBBP1AQ9BQG0 1328 aaKnown RBP21.82■■□□□ 1.08
CAD-208ENST00000479002 COL5A2P05997 1499 aaPredicted RBP21.82■■□□□ 1.08
CAD-208ENST00000479002 CDK12Q9NYV4 1490 aaPredicted RBP21.82■■□□□ 1.08
CAD-208ENST00000479002 MAP2P11137 1827 aaKnown RBP21.81■■□□□ 1.08
CAD-208ENST00000479002 PLCH1Q4KWH8 1693 aa21.81■■□□□ 1.08
CAD-208ENST00000479002 ERBB3P21860 1342 aa21.8■■□□□ 1.08
CAD-208ENST00000479002 NWD2Q9ULI1 1742 aa21.8■■□□□ 1.08
CAD-208ENST00000479002 EVA1CP58658 441 aa21.8■■□□□ 1.08
CAD-208ENST00000479002 DIEXFQ68CQ4 756 aaKnown RBP21.8■■□□□ 1.08
CAD-208ENST00000479002 ANKRD24Q8TF21 1146 aa21.8■■□□□ 1.08
CAD-208ENST00000479002 RGS17Q9UGC6 210 aaPredicted RBP21.8■■□□□ 1.08
CAD-208ENST00000479002 ZNF772Q68DY9 489 aaPredicted RBP21.79■■□□□ 1.08
CAD-208ENST00000479002 STRN4Q9NRL3 753 aa21.79■■□□□ 1.08
CAD-208ENST00000479002 WDR17Q8IZU2 1322 aa21.79■■□□□ 1.08
CAD-208ENST00000479002 VPS72Q15906 364 aa21.78■■□□□ 1.08
CAD-208ENST00000479002 NRAPQ86VF7 1730 aa21.77■■□□□ 1.08
CAD-208ENST00000479002 LARP1Q6PKG0 1096 aaKnown RBP21.77■■□□□ 1.08
CAD-208ENST00000479002 TRPC5Q9UL62 973 aaPredicted RBP21.77■■□□□ 1.08
CAD-208ENST00000479002 ATRNO75882 1429 aa21.76■■□□□ 1.07
CAD-208ENST00000479002 EIF4A2Q14240 407 aaKnown RBP21.76■■□□□ 1.07
CAD-208ENST00000479002 LTV1Q96GA3 475 aaPredicted RBP21.76■■□□□ 1.07
CAD-208ENST00000479002 PHF23Q9BUL5 403 aaPredicted RBP21.76■■□□□ 1.07
CAD-208ENST00000479002 CSB-PGBD3P0DP91 1061 aa21.75■■□□□ 1.07
CAD-208ENST00000479002 CFAP53Q96M91 514 aa21.75■■□□□ 1.07
CAD-208ENST00000479002 QTRT2Q9H974 415 aaKnown RBP21.75■■□□□ 1.07
CAD-208ENST00000479002 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.75■■□□□ 1.07
CAD-208ENST00000479002 IL13P35225 146 aa21.74■■□□□ 1.07
CAD-208ENST00000479002 CARD10Q9BWT7 1032 aa21.74■■□□□ 1.07
CAD-208ENST00000479002 COL3A1P02461 1466 aaPredicted RBP21.74■■□□□ 1.07
CAD-208ENST00000479002 SPATA31A5Q5VU36 1347 aa21.74■■□□□ 1.07
CAD-208ENST00000479002 SPATA31A7Q8IWB4 1347 aa21.74■■□□□ 1.07
CAD-208ENST00000479002 RGPD5Q99666 1765 aa21.74■■□□□ 1.07
CAD-208ENST00000479002 CRB1P82279 1406 aa21.73■■□□□ 1.07
CAD-208ENST00000479002 TOM1L2Q6ZVM7 507 aa21.73■■□□□ 1.07
CAD-208ENST00000479002 DIAPH1O60610 1272 aaKnown RBP21.72■■□□□ 1.07
CAD-208ENST00000479002 NBPF6Q5VWK0 638 aa21.72■■□□□ 1.07
CAD-208ENST00000479002 GJD4Q96KN9 370 aaPredicted RBP21.72■■□□□ 1.07
CAD-208ENST00000479002 NBPF4Q96M43 638 aa21.72■■□□□ 1.07
CAD-208ENST00000479002 SPATA31A1Q5TZJ5 1347 aa21.72■■□□□ 1.07
CAD-208ENST00000479002 EYA1Q99502 592 aa21.71■■□□□ 1.07
CAD-208ENST00000479002 NLRP2Q9NX02 1062 aa21.71■■□□□ 1.07
CAD-208ENST00000479002 POTEAQ6S8J7 498 aa21.7■■□□□ 1.06
CAD-208ENST00000479002 CCDC9Q9Y3X0 531 aaKnown RBP21.7■■□□□ 1.06
CAD-208ENST00000479002 TCP11L2Q8N4U5 519 aa21.68■■□□□ 1.06
CAD-208ENST00000479002 THRAP3Q9Y2W1 955 aaKnown RBP21.68■■□□□ 1.06
CAD-208ENST00000479002 IGSF1Q8N6C5 1336 aa21.68■■□□□ 1.06
CAD-208ENST00000479002 NCAPD2Q15021 1401 aa21.68■■□□□ 1.06
CAD-208ENST00000479002 RBM6P78332 1123 aaKnown RBP21.67■■□□□ 1.06
CAD-208ENST00000479002 CCDC184Q52MB2 194 aa21.66■■□□□ 1.06
CAD-208ENST00000479002 BARGINQ6ZT62 677 aa21.66■■□□□ 1.06
CAD-208ENST00000479002 USP35Q9P2H5 1018 aa21.66■■□□□ 1.06
CAD-208ENST00000479002 NUDCQ9Y266 331 aa21.66■■□□□ 1.06
CAD-208ENST00000479002 FAM208AQ9UK61 1670 aaKnown RBP21.66■■□□□ 1.06
CAD-208ENST00000479002 ONECUT3O60422 494 aaPredicted RBP21.65■■□□□ 1.06
CAD-208ENST00000479002 GLI3P10071 1580 aa21.65■■□□□ 1.06
CAD-208ENST00000479002 USHBP1Q8N6Y0 703 aa21.64■■□□□ 1.05
CAD-208ENST00000479002 RXRBP28702 533 aa21.63■■□□□ 1.05
CAD-208ENST00000479002 U2SURPO15042 1029 aaKnown RBP21.62■■□□□ 1.05
CAD-208ENST00000479002 MIER1Q8N108 512 aa21.62■■□□□ 1.05
CAD-208ENST00000479002 DISP2A7MBM2 1401 aa21.62■■□□□ 1.05
CAD-208ENST00000479002 KDRP35968 1356 aa21.61■■□□□ 1.05
CAD-208ENST00000479002 RGPD1P0DJD0 1748 aa21.61■■□□□ 1.05
CAD-208ENST00000479002 FAM98CQ17RN3 349 aaKnown RBP21.61■■□□□ 1.05
CAD-208ENST00000479002 SULT6B1Q6IMI4 303 aa21.61■■□□□ 1.05
CAD-208ENST00000479002 CCER2I3L3R5 266 aa21.6■■□□□ 1.05
CAD-208ENST00000479002 AEBP1Q8IUX7 1158 aa21.6■■□□□ 1.05
CAD-208ENST00000479002 CDCA7Q9BWT1 371 aaPredicted RBP21.6■■□□□ 1.05
CAD-208ENST00000479002 RGPD2P0DJD1 1756 aa21.59■■□□□ 1.05
CAD-208ENST00000479002 IL2RBP14784 551 aa21.59■■□□□ 1.05
CAD-208ENST00000479002 MRS2Q9HD23 443 aa21.59■■□□□ 1.05
CAD-208ENST00000479002 U2AF1L5P0DN76 240 aaPredicted RBP21.58■■□□□ 1.05
CAD-208ENST00000479002 U2AF1Q01081 240 aaKnown RBP eCLIP21.58■■□□□ 1.05
CAD-208ENST00000479002 HMOX1P09601 288 aa21.57■■□□□ 1.04
CAD-208ENST00000479002 RAPGEF4Q8WZA2 1011 aa21.57■■□□□ 1.04
CAD-208ENST00000479002 SEPT12Q8IYM1 358 aa21.56■■□□□ 1.04
CAD-208ENST00000479002 PNISRQ8TF01 805 aaKnown RBP21.56■■□□□ 1.04
CAD-208ENST00000479002 MEGF6O75095 1541 aa21.55■■□□□ 1.04
CAD-208ENST00000479002 FCHSD2O94868 740 aa21.55■■□□□ 1.04
CAD-208ENST00000479002 TATP17735 454 aaPredicted RBP21.55■■□□□ 1.04
CAD-208ENST00000479002 RSPH6AQ9H0K4 717 aa21.55■■□□□ 1.04
CAD-208ENST00000479002 PLEKHG2Q9H7P9 1386 aa21.55■■□□□ 1.04
CAD-208ENST00000479002 THSD7AQ9UPZ6 1657 aa21.54■■□□□ 1.04
CAD-208ENST00000479002 OVOS2A0A0G2JMS6 1433 aa21.54■■□□□ 1.04
CAD-208ENST00000479002 WDR43Q15061 677 aaKnown RBP eCLIP21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms