RNA–Protein interactions for RNA: ENST00000373514.2

CDX4-201, Transcript of caudal type homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX4, Length 1,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4-201ENST00000373514 TNNT2P45379 298 aaPredicted RBP25.34■■□□□ 1.65
CDX4-201ENST00000373514 RRS1Q15050 365 aaKnown RBP25.34■■□□□ 1.65
CDX4-201ENST00000373514 GLI3P10071 1580 aa25.34■■□□□ 1.65
CDX4-201ENST00000373514 ATRNO75882 1429 aa25.34■■□□□ 1.65
CDX4-201ENST00000373514 WNK3Q9BYP7 1800 aa25.33■■□□□ 1.64
CDX4-201ENST00000373514 MAP3K19Q56UN5 1328 aa25.33■■□□□ 1.64
CDX4-201ENST00000373514 POTEAQ6S8J7 498 aa25.32■■□□□ 1.64
CDX4-201ENST00000373514 AXIN2Q9Y2T1 843 aa25.32■■□□□ 1.64
CDX4-201ENST00000373514 ZNF772Q68DY9 489 aaPredicted RBP25.31■■□□□ 1.64
CDX4-201ENST00000373514 UNC5CLQ8IV45 518 aa25.31■■□□□ 1.64
CDX4-201ENST00000373514 FAM208AQ9UK61 1670 aaKnown RBP25.3■■□□□ 1.64
CDX4-201ENST00000373514 NPC1L1Q9UHC9 1359 aa25.3■■□□□ 1.64
CDX4-201ENST00000373514 DIEXFQ68CQ4 756 aaKnown RBP25.29■■□□□ 1.64
CDX4-201ENST00000373514 MORC1Q86VD1 984 aa25.29■■□□□ 1.64
CDX4-201ENST00000373514 STRN4Q9NRL3 753 aa25.29■■□□□ 1.64
CDX4-201ENST00000373514 EMILIN1Q9Y6C2 1016 aa25.29■■□□□ 1.64
CDX4-201ENST00000373514 RTL1A6NKG5 1358 aa25.27■■□□□ 1.64
CDX4-201ENST00000373514 QTRT2Q9H974 415 aaKnown RBP25.26■■□□□ 1.63
CDX4-201ENST00000373514 SMG6Q86US8 1419 aaKnown RBP25.25■■□□□ 1.63
CDX4-201ENST00000373514 HOXC9P31274 260 aa25.25■■□□□ 1.63
CDX4-201ENST00000373514 BLMP54132 1417 aaPredicted RBP25.25■■□□□ 1.63
CDX4-201ENST00000373514 TRPC5Q9UL62 973 aaPredicted RBP25.24■■□□□ 1.63
CDX4-201ENST00000373514 AMPHP49418 695 aa25.23■■□□□ 1.63
CDX4-201ENST00000373514 LARP1Q6PKG0 1096 aaKnown RBP25.23■■□□□ 1.63
CDX4-201ENST00000373514 FLT4P35916 1363 aa25.23■■□□□ 1.63
CDX4-201ENST00000373514 VPS72Q15906 364 aa25.22■■□□□ 1.63
CDX4-201ENST00000373514 IP6K1Q92551 441 aa25.22■■□□□ 1.63
CDX4-201ENST00000373514 POLKQ9UBT6 870 aa25.22■■□□□ 1.63
CDX4-201ENST00000373514 CCDC9Q9Y3X0 531 aaKnown RBP25.22■■□□□ 1.63
CDX4-201ENST00000373514 BRWD3Q6RI45 1802 aa25.22■■□□□ 1.63
CDX4-201ENST00000373514 PPM1GO15355 546 aaPredicted RBP25.22■■□□□ 1.63
CDX4-201ENST00000373514 ERBB3P21860 1342 aa25.21■■□□□ 1.63
CDX4-201ENST00000373514 CRB1P82279 1406 aa25.2■■□□□ 1.62
CDX4-201ENST00000373514 THSD7AQ9UPZ6 1657 aa25.2■■□□□ 1.62
CDX4-201ENST00000373514 CDK12Q9NYV4 1490 aaPredicted RBP25.2■■□□□ 1.62
CDX4-201ENST00000373514 EVA1CP58658 441 aa25.2■■□□□ 1.62
CDX4-201ENST00000373514 WDR17Q8IZU2 1322 aa25.2■■□□□ 1.62
CDX4-201ENST00000373514 ANKRD24Q8TF21 1146 aa25.19■■□□□ 1.62
CDX4-201ENST00000373514 LTV1Q96GA3 475 aaPredicted RBP25.19■■□□□ 1.62
CDX4-201ENST00000373514 SPATA31A5Q5VU36 1347 aa25.19■■□□□ 1.62
CDX4-201ENST00000373514 SPATA31A7Q8IWB4 1347 aa25.19■■□□□ 1.62
CDX4-201ENST00000373514 RGS12O14924 1447 aa25.19■■□□□ 1.62
CDX4-201ENST00000373514 HSP90AB2PQ58FF8 381 aa25.18■■□□□ 1.62
CDX4-201ENST00000373514 GJD4Q96KN9 370 aaPredicted RBP25.18■■□□□ 1.62
CDX4-201ENST00000373514 KIF24Q5T7B8 1368 aa25.18■■□□□ 1.62
CDX4-201ENST00000373514 USP35Q9P2H5 1018 aa25.17■■□□□ 1.62
CDX4-201ENST00000373514 CSB-PGBD3P0DP91 1061 aa25.17■■□□□ 1.62
CDX4-201ENST00000373514 SPATA31A1Q5TZJ5 1347 aa25.17■■□□□ 1.62
CDX4-201ENST00000373514 INSRP06213 1382 aa25.17■■□□□ 1.62
CDX4-201ENST00000373514 PARD3Q8TEW0 1356 aa25.17■■□□□ 1.62
CDX4-201ENST00000373514 RBM6P78332 1123 aaKnown RBP25.16■■□□□ 1.62
CDX4-201ENST00000373514 RXRBP28702 533 aa25.15■■□□□ 1.62
CDX4-201ENST00000373514 TOM1L2Q6ZVM7 507 aa25.15■■□□□ 1.62
CDX4-201ENST00000373514 PARP4Q9UKK3 1724 aaKnown RBP25.14■■□□□ 1.62
CDX4-201ENST00000373514 LRRC37A3O60309 1634 aa25.14■■□□□ 1.62
CDX4-201ENST00000373514 RGPD1P0DJD0 1748 aa25.13■■□□□ 1.61
CDX4-201ENST00000373514 COL3A1P02461 1466 aaPredicted RBP25.12■■□□□ 1.61
CDX4-201ENST00000373514 ILDR2Q71H61 639 aa25.12■■□□□ 1.61
CDX4-201ENST00000373514 MTHFSP49914 203 aa25.11■■□□□ 1.61
CDX4-201ENST00000373514 FAM98CQ17RN3 349 aaKnown RBP25.11■■□□□ 1.61
CDX4-201ENST00000373514 NLRP2Q9NX02 1062 aa25.1■■□□□ 1.61
CDX4-201ENST00000373514 PPP2R1AP30153 589 aa25.09■■□□□ 1.61
CDX4-201ENST00000373514 SHANK3Q9BYB0 1731 aa25.08■■□□□ 1.6
CDX4-201ENST00000373514 EIF4A2Q14240 407 aaKnown RBP25.07■■□□□ 1.6
CDX4-201ENST00000373514 TCP11L2Q8N4U5 519 aa25.07■■□□□ 1.6
CDX4-201ENST00000373514 USHBP1Q8N6Y0 703 aa25.07■■□□□ 1.6
CDX4-201ENST00000373514 CARD10Q9BWT7 1032 aa25.07■■□□□ 1.6
CDX4-201ENST00000373514 DISP2A7MBM2 1401 aa25.06■■□□□ 1.6
CDX4-201ENST00000373514 NBPF6Q5VWK0 638 aa25.06■■□□□ 1.6
CDX4-201ENST00000373514 NBPF4Q96M43 638 aa25.06■■□□□ 1.6
CDX4-201ENST00000373514 A0A0G2JS52 829 aa25.05■■□□□ 1.6
CDX4-201ENST00000373514 MYT1Q01538 1121 aa25.05■■□□□ 1.6
CDX4-201ENST00000373514 MEGF6O75095 1541 aa25.03■■□□□ 1.6
CDX4-201ENST00000373514 NCAPD2Q15021 1401 aa25.03■■□□□ 1.6
CDX4-201ENST00000373514 BARGINQ6ZT62 677 aa25.02■■□□□ 1.6
CDX4-201ENST00000373514 SEPT12Q8IYM1 358 aa25.02■■□□□ 1.6
CDX4-201ENST00000373514 THRAP3Q9Y2W1 955 aaKnown RBP25.02■■□□□ 1.6
CDX4-201ENST00000373514 ONECUT3O60422 494 aaPredicted RBP25.01■■□□□ 1.59
CDX4-201ENST00000373514 RALBP1Q15311 655 aa25.01■■□□□ 1.59
CDX4-201ENST00000373514 PRKRIP1Q9H875 184 aaPredicted RBP25.01■■□□□ 1.59
CDX4-201ENST00000373514 PKD1L3Q7Z443 1732 aa25■■□□□ 1.59
CDX4-201ENST00000373514 EYA1Q99502 592 aa25■■□□□ 1.59
CDX4-201ENST00000373514 IL13P35225 146 aa24.98■■□□□ 1.59
CDX4-201ENST00000373514 IGSF1Q8N6C5 1336 aa24.97■■□□□ 1.59
CDX4-201ENST00000373514 MYBBP1AQ9BQG0 1328 aaKnown RBP24.97■■□□□ 1.59
CDX4-201ENST00000373514 TNS2Q63HR2 1409 aa24.96■■□□□ 1.59
CDX4-201ENST00000373514 IL2RBP14784 551 aa24.95■■□□□ 1.58
CDX4-201ENST00000373514 OVOS2A0A0G2JMS6 1433 aa24.94■■□□□ 1.58
CDX4-201ENST00000373514 DIAPH1O60610 1272 aaKnown RBP24.94■■□□□ 1.58
CDX4-201ENST00000373514 MIER1Q8N108 512 aa24.94■■□□□ 1.58
CDX4-201ENST00000373514 AEBP1Q8IUX7 1158 aa24.93■■□□□ 1.58
CDX4-201ENST00000373514 SBF2Q86WG5 1849 aa24.92■■□□□ 1.58
CDX4-201ENST00000373514 CFAP53Q96M91 514 aa24.92■■□□□ 1.58
CDX4-201ENST00000373514 FAM182BQ5T319 152 aa24.91■■□□□ 1.58
CDX4-201ENST00000373514 DDB1Q16531 1140 aa24.9■■□□□ 1.58
CDX4-201ENST00000373514 KRT27Q7Z3Y8 459 aa24.9■■□□□ 1.58
CDX4-201ENST00000373514 CDCA7Q9BWT1 371 aaPredicted RBP24.9■■□□□ 1.58
CDX4-201ENST00000373514 VIRMAQ69YN4 1812 aaKnown RBP24.89■■□□□ 1.57
CDX4-201ENST00000373514 ANP32CO43423 234 aa24.88■■□□□ 1.57
CDX4-201ENST00000373514 DOT1LQ8TEK3 1739 aa24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms