RNA–Protein interactions for RNA: ENST00000355697.6

SFXN4-201, Transcript of sideroflexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFXN4, Length 1,363 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN4-201ENST00000355697 COL18A1P39060 1754 aa18.6■□□□□ 0.57
SFXN4-201ENST00000355697 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.59■□□□□ 0.57
SFXN4-201ENST00000355697 ZNF772Q68DY9 489 aaPredicted RBP18.59■□□□□ 0.57
SFXN4-201ENST00000355697 RGPD5Q99666 1765 aa18.59■□□□□ 0.57
SFXN4-201ENST00000355697 RTL1A6NKG5 1358 aa18.59■□□□□ 0.57
SFXN4-201ENST00000355697 NRAPQ86VF7 1730 aa18.59■□□□□ 0.57
SFXN4-201ENST00000355697 CAMTA1Q9Y6Y1 1673 aa18.58■□□□□ 0.56
SFXN4-201ENST00000355697 PPM1GO15355 546 aaPredicted RBP18.57■□□□□ 0.56
SFXN4-201ENST00000355697 UNC5CLQ8IV45 518 aa18.57■□□□□ 0.56
SFXN4-201ENST00000355697 KIF24Q5T7B8 1368 aa18.57■□□□□ 0.56
SFXN4-201ENST00000355697 BCL9LQ86UU0 1499 aa18.57■□□□□ 0.56
SFXN4-201ENST00000355697 BLMP54132 1417 aaPredicted RBP18.57■□□□□ 0.56
SFXN4-201ENST00000355697 EVA1CP58658 441 aa18.56■□□□□ 0.56
SFXN4-201ENST00000355697 IP6K1Q92551 441 aa18.56■□□□□ 0.56
SFXN4-201ENST00000355697 EMILIN1Q9Y6C2 1016 aa18.56■□□□□ 0.56
SFXN4-201ENST00000355697 FLT4P35916 1363 aa18.56■□□□□ 0.56
SFXN4-201ENST00000355697 COL5A2P05997 1499 aaPredicted RBP18.56■□□□□ 0.56
SFXN4-201ENST00000355697 HOXC9P31274 260 aa18.55■□□□□ 0.56
SFXN4-201ENST00000355697 STRN4Q9NRL3 753 aa18.55■□□□□ 0.56
SFXN4-201ENST00000355697 POLKQ9UBT6 870 aa18.55■□□□□ 0.56
SFXN4-201ENST00000355697 AXIN2Q9Y2T1 843 aa18.55■□□□□ 0.56
SFXN4-201ENST00000355697 PEAK1Q9H792 1746 aa18.55■□□□□ 0.56
SFXN4-201ENST00000355697 TRPC5Q9UL62 973 aaPredicted RBP18.54■□□□□ 0.56
SFXN4-201ENST00000355697 SMG6Q86US8 1419 aaKnown RBP18.53■□□□□ 0.56
SFXN4-201ENST00000355697 PARD3Q8TEW0 1356 aa18.53■□□□□ 0.56
SFXN4-201ENST00000355697 CSB-PGBD3P0DP91 1061 aa18.53■□□□□ 0.56
SFXN4-201ENST00000355697 CCDC9Q9Y3X0 531 aaKnown RBP18.53■□□□□ 0.56
SFXN4-201ENST00000355697 RALBP1Q15311 655 aa18.52■□□□□ 0.55
SFXN4-201ENST00000355697 QTRT2Q9H974 415 aaKnown RBP18.52■□□□□ 0.55
SFXN4-201ENST00000355697 RGS17Q9UGC6 210 aaPredicted RBP18.52■□□□□ 0.55
SFXN4-201ENST00000355697 CDK12Q9NYV4 1490 aaPredicted RBP18.52■□□□□ 0.55
SFXN4-201ENST00000355697 INSRP06213 1382 aa18.51■□□□□ 0.55
SFXN4-201ENST00000355697 ATRNO75882 1429 aa18.51■□□□□ 0.55
SFXN4-201ENST00000355697 VPS72Q15906 364 aa18.51■□□□□ 0.55
SFXN4-201ENST00000355697 ANKRD24Q8TF21 1146 aa18.51■□□□□ 0.55
SFXN4-201ENST00000355697 FAM208AQ9UK61 1670 aaKnown RBP18.51■□□□□ 0.55
SFXN4-201ENST00000355697 ERBB3P21860 1342 aa18.51■□□□□ 0.55
SFXN4-201ENST00000355697 WDR17Q8IZU2 1322 aa18.51■□□□□ 0.55
SFXN4-201ENST00000355697 MTHFSP49914 203 aa18.5■□□□□ 0.55
SFXN4-201ENST00000355697 HSP90AB2PQ58FF8 381 aa18.5■□□□□ 0.55
SFXN4-201ENST00000355697 TOM1L2Q6ZVM7 507 aa18.5■□□□□ 0.55
SFXN4-201ENST00000355697 LTV1Q96GA3 475 aaPredicted RBP18.5■□□□□ 0.55
SFXN4-201ENST00000355697 PPP2R1AP30153 589 aa18.49■□□□□ 0.55
SFXN4-201ENST00000355697 LARP1Q6PKG0 1096 aaKnown RBP18.49■□□□□ 0.55
SFXN4-201ENST00000355697 CRB1P82279 1406 aa18.48■□□□□ 0.55
SFXN4-201ENST00000355697 GJD4Q96KN9 370 aaPredicted RBP18.47■□□□□ 0.55
SFXN4-201ENST00000355697 PRKRIP1Q9H875 184 aaPredicted RBP18.47■□□□□ 0.55
SFXN4-201ENST00000355697 ANP32CO43423 234 aa18.46■□□□□ 0.55
SFXN4-201ENST00000355697 RBM6P78332 1123 aaKnown RBP18.46■□□□□ 0.55
SFXN4-201ENST00000355697 POTEAQ6S8J7 498 aa18.46■□□□□ 0.55
SFXN4-201ENST00000355697 NLRP2Q9NX02 1062 aa18.46■□□□□ 0.55
SFXN4-201ENST00000355697 USP35Q9P2H5 1018 aa18.46■□□□□ 0.55
SFXN4-201ENST00000355697 SPATA31A5Q5VU36 1347 aa18.46■□□□□ 0.55
SFXN4-201ENST00000355697 SPATA31A7Q8IWB4 1347 aa18.46■□□□□ 0.55
SFXN4-201ENST00000355697 CFAP53Q96M91 514 aa18.45■□□□□ 0.54
SFXN4-201ENST00000355697 SPATA31A1Q5TZJ5 1347 aa18.45■□□□□ 0.54
SFXN4-201ENST00000355697 MYBBP1AQ9BQG0 1328 aaKnown RBP18.45■□□□□ 0.54
SFXN4-201ENST00000355697 RGPD2P0DJD1 1756 aa18.44■□□□□ 0.54
SFXN4-201ENST00000355697 GLI3P10071 1580 aa18.44■□□□□ 0.54
SFXN4-201ENST00000355697 RXRBP28702 533 aa18.44■□□□□ 0.54
SFXN4-201ENST00000355697 CARD10Q9BWT7 1032 aa18.44■□□□□ 0.54
SFXN4-201ENST00000355697 MAPK8IP2Q13387 824 aaPredicted RBP18.43■□□□□ 0.54
SFXN4-201ENST00000355697 TCP11L2Q8N4U5 519 aa18.43■□□□□ 0.54
SFXN4-201ENST00000355697 EIF4A2Q14240 407 aaKnown RBP18.42■□□□□ 0.54
SFXN4-201ENST00000355697 THRAP3Q9Y2W1 955 aaKnown RBP18.42■□□□□ 0.54
SFXN4-201ENST00000355697 DIAPH1O60610 1272 aaKnown RBP18.41■□□□□ 0.54
SFXN4-201ENST00000355697 WNK3Q9BYP7 1800 aa18.4■□□□□ 0.54
SFXN4-201ENST00000355697 A0A0G2JS52 829 aa18.4■□□□□ 0.54
SFXN4-201ENST00000355697 MYT1Q01538 1121 aa18.4■□□□□ 0.54
SFXN4-201ENST00000355697 FAM98CQ17RN3 349 aaKnown RBP18.4■□□□□ 0.54
SFXN4-201ENST00000355697 COL3A1P02461 1466 aaPredicted RBP18.4■□□□□ 0.54
SFXN4-201ENST00000355697 NBPF6Q5VWK0 638 aa18.39■□□□□ 0.53
SFXN4-201ENST00000355697 BARGINQ6ZT62 677 aa18.39■□□□□ 0.53
SFXN4-201ENST00000355697 NBPF4Q96M43 638 aa18.39■□□□□ 0.53
SFXN4-201ENST00000355697 IL13P35225 146 aa18.38■□□□□ 0.53
SFXN4-201ENST00000355697 EYA1Q99502 592 aa18.38■□□□□ 0.53
SFXN4-201ENST00000355697 DIEXFQ68CQ4 756 aaKnown RBP18.37■□□□□ 0.53
SFXN4-201ENST00000355697 USHBP1Q8N6Y0 703 aa18.37■□□□□ 0.53
SFXN4-201ENST00000355697 CDCA7Q9BWT1 371 aaPredicted RBP18.37■□□□□ 0.53
SFXN4-201ENST00000355697 NUDCQ9Y266 331 aa18.37■□□□□ 0.53
SFXN4-201ENST00000355697 THSD7AQ9UPZ6 1657 aa18.36■□□□□ 0.53
SFXN4-201ENST00000355697 RGPD1P0DJD0 1748 aa18.35■□□□□ 0.53
SFXN4-201ENST00000355697 IGSF1Q8N6C5 1336 aa18.35■□□□□ 0.53
SFXN4-201ENST00000355697 ONECUT3O60422 494 aaPredicted RBP18.35■□□□□ 0.53
SFXN4-201ENST00000355697 IL2RBP14784 551 aa18.35■□□□□ 0.53
SFXN4-201ENST00000355697 PARP4Q9UKK3 1724 aaKnown RBP18.35■□□□□ 0.53
SFXN4-201ENST00000355697 RGS12O14924 1447 aa18.34■□□□□ 0.53
SFXN4-201ENST00000355697 NCAPD2Q15021 1401 aa18.34■□□□□ 0.53
SFXN4-201ENST00000355697 U2SURPO15042 1029 aaKnown RBP18.34■□□□□ 0.53
SFXN4-201ENST00000355697 SEPT12Q8IYM1 358 aa18.34■□□□□ 0.53
SFXN4-201ENST00000355697 RAPGEF4Q8WZA2 1011 aa18.34■□□□□ 0.53
SFXN4-201ENST00000355697 DISP2A7MBM2 1401 aa18.33■□□□□ 0.52
SFXN4-201ENST00000355697 TATP17735 454 aaPredicted RBP18.31■□□□□ 0.52
SFXN4-201ENST00000355697 SULT6B1Q6IMI4 303 aa18.31■□□□□ 0.52
SFXN4-201ENST00000355697 LRRC37A3O60309 1634 aa18.31■□□□□ 0.52
SFXN4-201ENST00000355697 BRWD3Q6RI45 1802 aa18.31■□□□□ 0.52
SFXN4-201ENST00000355697 DDB1Q16531 1140 aa18.3■□□□□ 0.52
SFXN4-201ENST00000355697 MEGF6O75095 1541 aa18.3■□□□□ 0.52
SFXN4-201ENST00000355697 U2AF1L5P0DN76 240 aaPredicted RBP18.3■□□□□ 0.52
SFXN4-201ENST00000355697 U2AF1Q01081 240 aaKnown RBP eCLIP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms