RNA–Protein interactions for RNA: ENST00000295549.8

LINC01116-201, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 2 BASIC

Gene LINC01116, Length 1,407 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-201ENST00000295549 UNC5CLQ8IV45 518 aa30.61■■■□□ 2.49
LINC01116-201ENST00000295549 USP21Q9UK80 565 aa30.61■■■□□ 2.49
LINC01116-201ENST00000295549 CAMTA1Q9Y6Y1 1673 aa30.61■■■□□ 2.49
LINC01116-201ENST00000295549 FLT4P35916 1363 aa30.61■■■□□ 2.49
LINC01116-201ENST00000295549 COL18A1P39060 1754 aa30.61■■■□□ 2.49
LINC01116-201ENST00000295549 SMG6Q86US8 1419 aaKnown RBP30.61■■■□□ 2.49
LINC01116-201ENST00000295549 LTN1O94822 1766 aa30.6■■■□□ 2.49
LINC01116-201ENST00000295549 PRKRIP1Q9H875 184 aaPredicted RBP30.59■■■□□ 2.49
LINC01116-201ENST00000295549 BLMP54132 1417 aaPredicted RBP30.59■■■□□ 2.49
LINC01116-201ENST00000295549 PPM1GO15355 546 aaPredicted RBP30.58■■■□□ 2.49
LINC01116-201ENST00000295549 ZNF772Q68DY9 489 aaPredicted RBP30.57■■■□□ 2.48
LINC01116-201ENST00000295549 NWD2Q9ULI1 1742 aa30.57■■■□□ 2.48
LINC01116-201ENST00000295549 PLCH1Q4KWH8 1693 aa30.57■■■□□ 2.48
LINC01116-201ENST00000295549 PPP2R1AP30153 589 aa30.56■■■□□ 2.48
LINC01116-201ENST00000295549 MTHFSP49914 203 aa30.56■■■□□ 2.48
LINC01116-201ENST00000295549 PHF23Q9BUL5 403 aaPredicted RBP30.56■■■□□ 2.48
LINC01116-201ENST00000295549 MAP2P11137 1827 aaKnown RBP30.56■■■□□ 2.48
LINC01116-201ENST00000295549 COL5A2P05997 1499 aaPredicted RBP30.56■■■□□ 2.48
LINC01116-201ENST00000295549 INSRP06213 1382 aa30.56■■■□□ 2.48
LINC01116-201ENST00000295549 HSP90AB2PQ58FF8 381 aa30.56■■■□□ 2.48
LINC01116-201ENST00000295549 EVA1CP58658 441 aa30.55■■■□□ 2.48
LINC01116-201ENST00000295549 PEAK1Q9H792 1746 aa30.54■■■□□ 2.48
LINC01116-201ENST00000295549 ERBB3P21860 1342 aa30.54■■■□□ 2.48
LINC01116-201ENST00000295549 RGS17Q9UGC6 210 aaPredicted RBP30.54■■■□□ 2.48
LINC01116-201ENST00000295549 STRN4Q9NRL3 753 aa30.52■■■□□ 2.48
LINC01116-201ENST00000295549 CDK12Q9NYV4 1490 aaPredicted RBP30.52■■■□□ 2.48
LINC01116-201ENST00000295549 VPS72Q15906 364 aa30.51■■■□□ 2.47
LINC01116-201ENST00000295549 ANKRD24Q8TF21 1146 aa30.51■■■□□ 2.47
LINC01116-201ENST00000295549 TRPC5Q9UL62 973 aaPredicted RBP30.51■■■□□ 2.47
LINC01116-201ENST00000295549 WDR17Q8IZU2 1322 aa30.5■■■□□ 2.47
LINC01116-201ENST00000295549 ANP32CO43423 234 aa30.5■■■□□ 2.47
LINC01116-201ENST00000295549 MYBBP1AQ9BQG0 1328 aaKnown RBP30.5■■■□□ 2.47
LINC01116-201ENST00000295549 NRAPQ86VF7 1730 aa30.49■■■□□ 2.47
LINC01116-201ENST00000295549 QTRT2Q9H974 415 aaKnown RBP30.49■■■□□ 2.47
LINC01116-201ENST00000295549 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.49■■■□□ 2.47
LINC01116-201ENST00000295549 ATRNO75882 1429 aa30.49■■■□□ 2.47
LINC01116-201ENST00000295549 LARP1Q6PKG0 1096 aaKnown RBP30.48■■■□□ 2.47
LINC01116-201ENST00000295549 CSB-PGBD3P0DP91 1061 aa30.47■■■□□ 2.47
LINC01116-201ENST00000295549 LTV1Q96GA3 475 aaPredicted RBP30.46■■■□□ 2.47
LINC01116-201ENST00000295549 RGPD5Q99666 1765 aa30.45■■■□□ 2.47
LINC01116-201ENST00000295549 CRB1P82279 1406 aa30.45■■■□□ 2.46
LINC01116-201ENST00000295549 SPATA31A5Q5VU36 1347 aa30.44■■■□□ 2.46
LINC01116-201ENST00000295549 SPATA31A7Q8IWB4 1347 aa30.44■■■□□ 2.46
LINC01116-201ENST00000295549 TOM1L2Q6ZVM7 507 aa30.44■■■□□ 2.46
LINC01116-201ENST00000295549 EIF4A2Q14240 407 aaKnown RBP30.43■■■□□ 2.46
LINC01116-201ENST00000295549 DIEXFQ68CQ4 756 aaKnown RBP30.43■■■□□ 2.46
LINC01116-201ENST00000295549 GJD4Q96KN9 370 aaPredicted RBP30.43■■■□□ 2.46
LINC01116-201ENST00000295549 CFAP53Q96M91 514 aa30.42■■■□□ 2.46
LINC01116-201ENST00000295549 CARD10Q9BWT7 1032 aa30.42■■■□□ 2.46
LINC01116-201ENST00000295549 SPATA31A1Q5TZJ5 1347 aa30.42■■■□□ 2.46
LINC01116-201ENST00000295549 POTEAQ6S8J7 498 aa30.41■■■□□ 2.46
LINC01116-201ENST00000295549 NLRP2Q9NX02 1062 aa30.41■■■□□ 2.46
LINC01116-201ENST00000295549 CCDC9Q9Y3X0 531 aaKnown RBP30.41■■■□□ 2.46
LINC01116-201ENST00000295549 IL13P35225 146 aa30.39■■■□□ 2.46
LINC01116-201ENST00000295549 DIAPH1O60610 1272 aaKnown RBP30.39■■■□□ 2.45
LINC01116-201ENST00000295549 RBM6P78332 1123 aaKnown RBP30.38■■■□□ 2.45
LINC01116-201ENST00000295549 NBPF6Q5VWK0 638 aa30.38■■■□□ 2.45
LINC01116-201ENST00000295549 NBPF4Q96M43 638 aa30.38■■■□□ 2.45
LINC01116-201ENST00000295549 THRAP3Q9Y2W1 955 aaKnown RBP30.38■■■□□ 2.45
LINC01116-201ENST00000295549 COL3A1P02461 1466 aaPredicted RBP30.37■■■□□ 2.45
LINC01116-201ENST00000295549 TCP11L2Q8N4U5 519 aa30.37■■■□□ 2.45
LINC01116-201ENST00000295549 USP35Q9P2H5 1018 aa30.36■■■□□ 2.45
LINC01116-201ENST00000295549 RXRBP28702 533 aa30.35■■■□□ 2.45
LINC01116-201ENST00000295549 EYA1Q99502 592 aa30.35■■■□□ 2.45
LINC01116-201ENST00000295549 FAM208AQ9UK61 1670 aaKnown RBP30.34■■■□□ 2.45
LINC01116-201ENST00000295549 BARGINQ6ZT62 677 aa30.34■■■□□ 2.45
LINC01116-201ENST00000295549 IGSF1Q8N6C5 1336 aa30.31■■■□□ 2.44
LINC01116-201ENST00000295549 ONECUT3O60422 494 aaPredicted RBP30.31■■■□□ 2.44
LINC01116-201ENST00000295549 GLI3P10071 1580 aa30.31■■■□□ 2.44
LINC01116-201ENST00000295549 NCAPD2Q15021 1401 aa30.3■■■□□ 2.44
LINC01116-201ENST00000295549 NUDCQ9Y266 331 aa30.3■■■□□ 2.44
LINC01116-201ENST00000295549 FAM98CQ17RN3 349 aaKnown RBP30.29■■■□□ 2.44
LINC01116-201ENST00000295549 USHBP1Q8N6Y0 703 aa30.28■■■□□ 2.44
LINC01116-201ENST00000295549 CDCA7Q9BWT1 371 aaPredicted RBP30.28■■■□□ 2.44
LINC01116-201ENST00000295549 IL2RBP14784 551 aa30.24■■■□□ 2.43
LINC01116-201ENST00000295549 DISP2A7MBM2 1401 aa30.24■■■□□ 2.43
LINC01116-201ENST00000295549 U2SURPO15042 1029 aaKnown RBP30.23■■■□□ 2.43
LINC01116-201ENST00000295549 KDRP35968 1356 aa30.23■■■□□ 2.43
LINC01116-201ENST00000295549 RGPD2P0DJD1 1756 aa30.23■■■□□ 2.43
LINC01116-201ENST00000295549 RGPD1P0DJD0 1748 aa30.23■■■□□ 2.43
LINC01116-201ENST00000295549 SULT6B1Q6IMI4 303 aa30.22■■■□□ 2.43
LINC01116-201ENST00000295549 RAPGEF4Q8WZA2 1011 aa30.21■■■□□ 2.43
LINC01116-201ENST00000295549 CCDC184Q52MB2 194 aa30.2■■■□□ 2.42
LINC01116-201ENST00000295549 AEBP1Q8IUX7 1158 aa30.2■■■□□ 2.42
LINC01116-201ENST00000295549 SEPT12Q8IYM1 358 aa30.2■■■□□ 2.42
LINC01116-201ENST00000295549 U2AF1L5P0DN76 240 aaPredicted RBP30.19■■■□□ 2.42
LINC01116-201ENST00000295549 U2AF1Q01081 240 aaKnown RBP eCLIP30.19■■■□□ 2.42
LINC01116-201ENST00000295549 PLEKHG2Q9H7P9 1386 aa30.17■■■□□ 2.42
LINC01116-201ENST00000295549 HMOX1P09601 288 aa30.17■■■□□ 2.42
LINC01116-201ENST00000295549 TATP17735 454 aaPredicted RBP30.17■■■□□ 2.42
LINC01116-201ENST00000295549 MRS2Q9HD23 443 aa30.17■■■□□ 2.42
LINC01116-201ENST00000295549 THSD7AQ9UPZ6 1657 aa30.16■■■□□ 2.42
LINC01116-201ENST00000295549 MEGF6O75095 1541 aa30.16■■■□□ 2.42
LINC01116-201ENST00000295549 A0A0G2JS52 829 aa30.15■■■□□ 2.42
LINC01116-201ENST00000295549 MYT1Q01538 1121 aa30.15■■■□□ 2.42
LINC01116-201ENST00000295549 OVOS2A0A0G2JMS6 1433 aa30.15■■■□□ 2.42
LINC01116-201ENST00000295549 RGS12O14924 1447 aa30.15■■■□□ 2.42
LINC01116-201ENST00000295549 CCER2I3L3R5 266 aa30.14■■■□□ 2.42
LINC01116-201ENST00000295549 FCHSD2O94868 740 aa30.14■■■□□ 2.42
LINC01116-201ENST00000295549 EXOC5O00471 708 aa30.13■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms