RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 ATXN1LP0C7T5 689 aaKnown RBP18.73■□□□□ 0.59
SSBP4-212ENST00000601919 MGAT1P26572 445 aa18.73■□□□□ 0.59
SSBP4-212ENST00000601919 ELK3P41970 407 aa18.73■□□□□ 0.59
SSBP4-212ENST00000601919 IL12RB1P42701 662 aa18.73■□□□□ 0.59
SSBP4-212ENST00000601919 KIR2DL1P43626 348 aaPredicted RBP18.73■□□□□ 0.59
SSBP4-212ENST00000601919 GRIA4P48058 902 aa18.73■□□□□ 0.59
SSBP4-212ENST00000601919 SEC13P55735 322 aa18.73■□□□□ 0.59
SSBP4-212ENST00000601919 POLR2LP62875 67 aaKnown RBP18.73■□□□□ 0.59
SSBP4-212ENST00000601919 OLIG2Q13516 323 aa18.73■□□□□ 0.59
SSBP4-212ENST00000601919 ENPP2Q13822 863 aa18.73■□□□□ 0.59
SSBP4-212ENST00000601919 HSF5Q4G112 596 aaPredicted RBP18.73■□□□□ 0.59
SSBP4-212ENST00000601919 MSS51Q4VC12 460 aa18.73■□□□□ 0.59
SSBP4-212ENST00000601919 DENND5AQ6IQ26 1287 aa18.73■□□□□ 0.59
SSBP4-212ENST00000601919 GDPD4Q6W3E5 623 aa18.73■□□□□ 0.59
SSBP4-212ENST00000601919 PALM2Q8IXS6 379 aa18.73■□□□□ 0.59
SSBP4-212ENST00000601919 HCAR2Q8TDS4 363 aa18.73■□□□□ 0.59
SSBP4-212ENST00000601919 PTCD2Q8WV60 388 aaKnown RBP18.73■□□□□ 0.59
SSBP4-212ENST00000601919 STAMBPL1Q96FJ0 436 aa18.73■□□□□ 0.59
SSBP4-212ENST00000601919 SIGLEC10Q96LC7 697 aa18.73■□□□□ 0.59
SSBP4-212ENST00000601919 EBNA1BP2Q99848 306 aaKnown RBP18.73■□□□□ 0.59
SSBP4-212ENST00000601919 PABPC3Q9H361 631 aaKnown RBP18.73■□□□□ 0.59
SSBP4-212ENST00000601919 WNT16Q9UBV4 365 aa18.73■□□□□ 0.59
SSBP4-212ENST00000601919 FBXL21Q9UKT6 434 aa18.73■□□□□ 0.59
SSBP4-212ENST00000601919 PCDHB9Q9Y5E1 797 aa18.73■□□□□ 0.59
SSBP4-212ENST00000601919 MAD1L1Q9Y6D9 718 aa18.73■□□□□ 0.59
SSBP4-212ENST00000601919 TEX264Q9Y6I9 313 aa18.73■□□□□ 0.59
SSBP4-212ENST00000601919 F5P12259 2224 aa18.72■□□□□ 0.59
SSBP4-212ENST00000601919 SPAG6O75602 509 aa18.72■□□□□ 0.59
SSBP4-212ENST00000601919 PIGNO95427 931 aa18.72■□□□□ 0.59
SSBP4-212ENST00000601919 TTC4O95801 387 aa18.72■□□□□ 0.59
SSBP4-212ENST00000601919 HLA-EP13747 358 aa18.72■□□□□ 0.59
SSBP4-212ENST00000601919 PRKCHP24723 683 aa18.72■□□□□ 0.59
SSBP4-212ENST00000601919 NTSR1P30989 418 aa18.72■□□□□ 0.59
SSBP4-212ENST00000601919 PHBP35232 272 aa18.72■□□□□ 0.59
SSBP4-212ENST00000601919 TIE1P35590 1138 aa18.72■□□□□ 0.59
SSBP4-212ENST00000601919 GALNT3Q14435 633 aa18.72■□□□□ 0.59
SSBP4-212ENST00000601919 STARD3Q14849 445 aa18.72■□□□□ 0.59
SSBP4-212ENST00000601919 C9orf64Q5T6V5 341 aa18.72■□□□□ 0.59
SSBP4-212ENST00000601919 BRAT1Q6PJG6 821 aa18.72■□□□□ 0.59
SSBP4-212ENST00000601919 ANKMY2Q8IV38 441 aa18.72■□□□□ 0.59
SSBP4-212ENST00000601919 CHST14Q8NCH0 376 aa18.72■□□□□ 0.59
SSBP4-212ENST00000601919 FBXO36Q8NEA4 188 aa18.72■□□□□ 0.59
SSBP4-212ENST00000601919 PPHLN1Q8NEY8 458 aaKnown RBP18.72■□□□□ 0.59
SSBP4-212ENST00000601919 LPCAT1Q8NF37 534 aa18.72■□□□□ 0.59
SSBP4-212ENST00000601919 UBLCP1Q8WVY7 318 aaPredicted RBP18.72■□□□□ 0.59
SSBP4-212ENST00000601919 ASB2Q96Q27 587 aa18.72■□□□□ 0.59
SSBP4-212ENST00000601919 CDC42EP4Q9H3Q1 356 aaKnown RBP18.72■□□□□ 0.59
SSBP4-212ENST00000601919 FBRSQ9HAH7 460 aa18.72■□□□□ 0.59
SSBP4-212ENST00000601919 ARHGEF3Q9NR81 526 aa18.72■□□□□ 0.59
SSBP4-212ENST00000601919 PIH1D1Q9NWS0 290 aaKnown RBP18.72■□□□□ 0.59
SSBP4-212ENST00000601919 CACNA2D2Q9NY47 1150 aa18.72■□□□□ 0.59
SSBP4-212ENST00000601919 HACD3Q9P035 362 aa18.72■□□□□ 0.59
SSBP4-212ENST00000601919 ZC3H7BQ9UGR2 993 aaKnown RBP18.72■□□□□ 0.59
SSBP4-212ENST00000601919 CHMP2BQ9UQN3 213 aa18.72■□□□□ 0.59
SSBP4-212ENST00000601919 HEATR9A2RTY3 570 aa18.71■□□□□ 0.59
SSBP4-212ENST00000601919 ANKRD66B4E2M5 251 aa18.71■□□□□ 0.59
SSBP4-212ENST00000601919 TRAFD1O14545 582 aaPredicted RBP18.71■□□□□ 0.59
SSBP4-212ENST00000601919 FZD6O60353 706 aa18.71■□□□□ 0.59
SSBP4-212ENST00000601919 RNASEH1O60930 286 aaKnown RBP18.71■□□□□ 0.59
SSBP4-212ENST00000601919 SIN3BO75182 1162 aa18.71■□□□□ 0.59
SSBP4-212ENST00000601919 LEFTY1O75610 366 aa18.71■□□□□ 0.59
SSBP4-212ENST00000601919 PRLP01236 227 aa18.71■□□□□ 0.59
SSBP4-212ENST00000601919 UGT2B4P06133 528 aa18.71■□□□□ 0.59
SSBP4-212ENST00000601919 GSTA2P09210 222 aa18.71■□□□□ 0.59
SSBP4-212ENST00000601919 BMP1P13497 986 aa18.71■□□□□ 0.59
SSBP4-212ENST00000601919 TPH1P17752 444 aa18.71■□□□□ 0.59
SSBP4-212ENST00000601919 PGAM1P18669 254 aa18.71■□□□□ 0.59
SSBP4-212ENST00000601919 ADRA1DP25100 572 aa18.71■□□□□ 0.59
SSBP4-212ENST00000601919 CHRNA4P43681 627 aa18.71■□□□□ 0.59
SSBP4-212ENST00000601919 MTM1Q13496 603 aa18.71■□□□□ 0.59
SSBP4-212ENST00000601919 ARSIQ5FYB1 569 aa18.71■□□□□ 0.59
SSBP4-212ENST00000601919 PCID2Q5JVF3 399 aa18.71■□□□□ 0.59
SSBP4-212ENST00000601919 HP1BP3Q5SSJ5 553 aaPredicted RBP18.71■□□□□ 0.59
SSBP4-212ENST00000601919 EMC10Q5UCC4 262 aa18.71■□□□□ 0.59
SSBP4-212ENST00000601919 DENND2CQ68D51 928 aa18.71■□□□□ 0.59
SSBP4-212ENST00000601919 NLRP9Q7RTR0 991 aa18.71■□□□□ 0.59
SSBP4-212ENST00000601919 HDXQ7Z353 690 aa18.71■□□□□ 0.59
SSBP4-212ENST00000601919 STK40Q8N2I9 435 aa18.71■□□□□ 0.59
SSBP4-212ENST00000601919 ZNF366Q8N895 744 aa18.71■□□□□ 0.59
SSBP4-212ENST00000601919 TMIEQ8NEW7 156 aa18.71■□□□□ 0.59
SSBP4-212ENST00000601919 GRIN3AQ8TCU5 1115 aa18.71■□□□□ 0.59
SSBP4-212ENST00000601919 SPOCK2Q92563 424 aa18.71■□□□□ 0.59
SSBP4-212ENST00000601919 ECHDC3Q96DC8 303 aa18.71■□□□□ 0.59
SSBP4-212ENST00000601919 C9orf72Q96LT7 481 aa18.71■□□□□ 0.59
SSBP4-212ENST00000601919 NSMCE3Q96MG7 304 aa18.71■□□□□ 0.59
SSBP4-212ENST00000601919 RANBP9Q96S59 729 aa18.71■□□□□ 0.59
SSBP4-212ENST00000601919 SEMA4AQ9H3S1 761 aa18.71■□□□□ 0.59
SSBP4-212ENST00000601919 SYBUQ9NX95 663 aa18.71■□□□□ 0.59
SSBP4-212ENST00000601919 HCN2Q9UL51 889 aa18.71■□□□□ 0.59
SSBP4-212ENST00000601919 PHTF1Q9UMS5 762 aa18.71■□□□□ 0.59
SSBP4-212ENST00000601919 TCF20Q9UGU0 1960 aaKnown RBP18.7■□□□□ 0.58
SSBP4-212ENST00000601919 C1QTNF3-AMACRE9PGA6 284 aa18.7■□□□□ 0.58
SSBP4-212ENST00000601919 BANF1O75531 89 aa18.7■□□□□ 0.58
SSBP4-212ENST00000601919 POLBP06746 335 aa18.7■□□□□ 0.58
SSBP4-212ENST00000601919 PDHA1P08559 390 aa18.7■□□□□ 0.58
SSBP4-212ENST00000601919 GKP32189 559 aa18.7■□□□□ 0.58
SSBP4-212ENST00000601919 CKAP5Q14008 2032 aa18.7■□□□□ 0.58
SSBP4-212ENST00000601919 LRRC32Q14392 662 aa18.7■□□□□ 0.58
SSBP4-212ENST00000601919 FASTKD3Q14CZ7 662 aaKnown RBP18.7■□□□□ 0.58
SSBP4-212ENST00000601919 C2orf27AQ580R0 203 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms