RNA–Protein interactions for RNA: ENST00000599275.1

CERS4-215, Transcript of ceramide synthase 4, human

TSL 2

Gene CERS4, Length 710 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CERS4-215	ENST00000599275	PCDH8	O95206	1070 aa		18.2	■□□□□ 0.5
CERS4-215	ENST00000599275	NFKB1	P19838	968 aa		18.2	■□□□□ 0.5
CERS4-215	ENST00000599275	ITPKA	P23677	461 aa		18.2	■□□□□ 0.5
CERS4-215	ENST00000599275	MAOB	P27338	520 aa		18.2	■□□□□ 0.5
CERS4-215	ENST00000599275	CD68	P34810	354 aa	Predicted RBP	18.2	■□□□□ 0.5
CERS4-215	ENST00000599275	PPP2CB	P62714	309 aa		18.2	■□□□□ 0.5
CERS4-215	ENST00000599275	PPP2CA	P67775	309 aa		18.2	■□□□□ 0.5
CERS4-215	ENST00000599275	SKOR1	P84550	965 aa		18.2	■□□□□ 0.5
CERS4-215	ENST00000599275	CREB5	Q02930	508 aa		18.2	■□□□□ 0.5
CERS4-215	ENST00000599275	SNX1	Q13596	522 aa		18.2	■□□□□ 0.5
CERS4-215	ENST00000599275	SYCP2L	Q5T4T6	812 aa		18.2	■□□□□ 0.5
CERS4-215	ENST00000599275	PID1	Q7Z2X4	250 aa		18.2	■□□□□ 0.5
CERS4-215	ENST00000599275	CYP2U1	Q7Z449	544 aa		18.2	■□□□□ 0.5
CERS4-215	ENST00000599275	RGL4	Q8IZJ4	473 aa		18.2	■□□□□ 0.5
CERS4-215	ENST00000599275	RASGEF1C	Q8N431	466 aa		18.2	■□□□□ 0.5
CERS4-215	ENST00000599275	COG1	Q8WTW3	980 aa		18.2	■□□□□ 0.5
CERS4-215	ENST00000599275	MAIP1	Q8WWC4	291 aa		18.2	■□□□□ 0.5
CERS4-215	ENST00000599275	BIRC7	Q96CA5	298 aa		18.2	■□□□□ 0.5
CERS4-215	ENST00000599275	IMP4	Q96G21	291 aa	Known RBP	18.2	■□□□□ 0.5
CERS4-215	ENST00000599275	LOXL4	Q96JB6	756 aa		18.2	■□□□□ 0.5
CERS4-215	ENST00000599275	RBM15	Q96T37	977 aa	Known RBP eCLIP	18.2	■□□□□ 0.5
CERS4-215	ENST00000599275	NAPG	Q99747	312 aa	Predicted RBP	18.2	■□□□□ 0.5
CERS4-215	ENST00000599275	FRMD8P1	Q9BZ68	369 aa	Predicted RBP	18.2	■□□□□ 0.5
CERS4-215	ENST00000599275	SLC25A51	Q9H1U9	297 aa		18.2	■□□□□ 0.5
CERS4-215	ENST00000599275	PREB	Q9HCU5	417 aa		18.2	■□□□□ 0.5
CERS4-215	ENST00000599275	TRHDE	Q9UKU6	1024 aa		18.2	■□□□□ 0.5
CERS4-215	ENST00000599275	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	18.2	■□□□□ 0.5
CERS4-215	ENST00000599275	PCDHB9	Q9Y5E1	797 aa		18.2	■□□□□ 0.5
CERS4-215	ENST00000599275	TNRC6B	Q9UPQ9	1833 aa	Known RBP	18.2	■□□□□ 0.5
CERS4-215	ENST00000599275	ATXN2	Q99700	1313 aa	Known RBP	18.2	■□□□□ 0.5
CERS4-215	ENST00000599275		F5H423	210 aa	Predicted RBP	18.19	■□□□□ 0.5
CERS4-215	ENST00000599275	NEMP1	O14524	444 aa		18.19	■□□□□ 0.5
CERS4-215	ENST00000599275	AREL1	O15033	823 aa		18.19	■□□□□ 0.5
CERS4-215	ENST00000599275	AP1G1	O43747	822 aa		18.19	■□□□□ 0.5
CERS4-215	ENST00000599275	RNGTT	O60942	597 aa	Known RBP	18.19	■□□□□ 0.5
CERS4-215	ENST00000599275	STK10	O94804	968 aa	Known RBP	18.19	■□□□□ 0.5
CERS4-215	ENST00000599275	EPN2	O95208	641 aa		18.19	■□□□□ 0.5
CERS4-215	ENST00000599275	PGLS	O95336	258 aa		18.19	■□□□□ 0.5
CERS4-215	ENST00000599275	PRKCG	P05129	697 aa		18.19	■□□□□ 0.5
CERS4-215	ENST00000599275	IGHV4-34	P06331	123 aa		18.19	■□□□□ 0.5
CERS4-215	ENST00000599275	MAT2A	P31153	395 aa	Known RBP	18.19	■□□□□ 0.5
CERS4-215	ENST00000599275	HS1BP3	Q53T59	392 aa		18.19	■□□□□ 0.5
CERS4-215	ENST00000599275	ARMC12	Q5T9G4	340 aa		18.19	■□□□□ 0.5
CERS4-215	ENST00000599275	ASCL5	Q7RTU5	278 aa		18.19	■□□□□ 0.5
CERS4-215	ENST00000599275	PRPF39	Q86UA1	669 aa	Known RBP	18.19	■□□□□ 0.5
CERS4-215	ENST00000599275	FAM71D	Q8N9W8	422 aa		18.19	■□□□□ 0.5
CERS4-215	ENST00000599275	SPATA22	Q8NHS9	363 aa		18.19	■□□□□ 0.5
CERS4-215	ENST00000599275	PIGK	Q92643	395 aa		18.19	■□□□□ 0.5
CERS4-215	ENST00000599275	TMEM121	Q9BTD3	319 aa		18.19	■□□□□ 0.5
CERS4-215	ENST00000599275	ARRDC1-AS1	Q9H2J1	176 aa		18.19	■□□□□ 0.5
CERS4-215	ENST00000599275	PCDH12	Q9NPG4	1184 aa		18.19	■□□□□ 0.5
CERS4-215	ENST00000599275	NCDN	Q9UBB6	729 aa		18.19	■□□□□ 0.5
CERS4-215	ENST00000599275	GMEB2	Q9UKD1	530 aa		18.19	■□□□□ 0.5
CERS4-215	ENST00000599275	SDK1	Q7Z5N4	2213 aa		18.18	■□□□□ 0.5
CERS4-215	ENST00000599275		A0A1W2PQU0	124 aa		18.18	■□□□□ 0.5
CERS4-215	ENST00000599275	C10orf142	B7Z368	130 aa		18.18	■□□□□ 0.5
CERS4-215	ENST00000599275	ZNF185	O15231	689 aa		18.18	■□□□□ 0.5
CERS4-215	ENST00000599275	ZNF189	O75820	626 aa	Predicted RBP	18.18	■□□□□ 0.5
CERS4-215	ENST00000599275	CP	P00450	1065 aa		18.18	■□□□□ 0.5
CERS4-215	ENST00000599275	RET	P07949	1114 aa		18.18	■□□□□ 0.5
CERS4-215	ENST00000599275	PDHA1	P08559	390 aa		18.18	■□□□□ 0.5
CERS4-215	ENST00000599275	CCR5	P51681	352 aa		18.18	■□□□□ 0.5
CERS4-215	ENST00000599275	POLR2L	P62875	67 aa	Known RBP	18.18	■□□□□ 0.5
CERS4-215	ENST00000599275	SEMG2	Q02383	582 aa		18.18	■□□□□ 0.5
CERS4-215	ENST00000599275	OASL	Q15646	514 aa	Known RBP	18.18	■□□□□ 0.5
CERS4-215	ENST00000599275	WDR45B	Q5MNZ6	344 aa		18.18	■□□□□ 0.5
CERS4-215	ENST00000599275	ANKRD20A2	Q5SQ80	823 aa		18.18	■□□□□ 0.5
CERS4-215	ENST00000599275	ANKRD20A1	Q5TYW2	823 aa		18.18	■□□□□ 0.5
CERS4-215	ENST00000599275	ANKRD20A3	Q5VUR7	823 aa		18.18	■□□□□ 0.5
CERS4-215	ENST00000599275	NEK5	Q6P3R8	708 aa		18.18	■□□□□ 0.5
CERS4-215	ENST00000599275	CCDC110	Q8TBZ0	833 aa		18.18	■□□□□ 0.5
CERS4-215	ENST00000599275	TDRD1	Q9BXT4	1180 aa	Known RBP	18.18	■□□□□ 0.5
CERS4-215	ENST00000599275	MIR1-1HG	Q9H1L0	117 aa		18.18	■□□□□ 0.5
CERS4-215	ENST00000599275	TMEM74B	Q9NUR3	256 aa		18.18	■□□□□ 0.5
CERS4-215	ENST00000599275	SMARCAL1	Q9NZC9	954 aa		18.18	■□□□□ 0.5
CERS4-215	ENST00000599275	UBP1	Q9NZI7	540 aa		18.18	■□□□□ 0.5
CERS4-215	ENST00000599275	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	18.18	■□□□□ 0.5
CERS4-215	ENST00000599275	RSPH14	Q9UHP6	348 aa		18.18	■□□□□ 0.5
CERS4-215	ENST00000599275	EIF2B4	Q9UI10	523 aa	Known RBP	18.18	■□□□□ 0.5
CERS4-215	ENST00000599275	ZFR2	Q9UPR6	939 aa	Known RBP	18.18	■□□□□ 0.5
CERS4-215	ENST00000599275	CHKB	Q9Y259	395 aa		18.18	■□□□□ 0.5
CERS4-215	ENST00000599275	ZKSCAN5	Q9Y2L8	839 aa		18.18	■□□□□ 0.5
CERS4-215	ENST00000599275		A0A1W2PQ67	120 aa		18.17	■□□□□ 0.5
CERS4-215	ENST00000599275	CTAGE9	A4FU28	777 aa		18.17	■□□□□ 0.5
CERS4-215	ENST00000599275	CES2	O00748	559 aa		18.17	■□□□□ 0.5
CERS4-215	ENST00000599275	RIOK3	O14730	519 aa	Known RBP	18.17	■□□□□ 0.5
CERS4-215	ENST00000599275	FANCG	O15287	622 aa		18.17	■□□□□ 0.5
CERS4-215	ENST00000599275	TSPAN6	O43657	245 aa		18.17	■□□□□ 0.5
CERS4-215	ENST00000599275	FZD6	O60353	706 aa		18.17	■□□□□ 0.5
CERS4-215	ENST00000599275	MT-CYB	P00156	380 aa	Predicted RBP	18.17	■□□□□ 0.5
CERS4-215	ENST00000599275	TCP1	P17987	556 aa	Known RBP	18.17	■□□□□ 0.5
CERS4-215	ENST00000599275	CA4	P22748	312 aa		18.17	■□□□□ 0.5
CERS4-215	ENST00000599275	SUOX	P51687	545 aa		18.17	■□□□□ 0.5
CERS4-215	ENST00000599275	GDF10	P55107	478 aa		18.17	■□□□□ 0.5
CERS4-215	ENST00000599275	FAM193A	P78312	1265 aa		18.17	■□□□□ 0.5
CERS4-215	ENST00000599275	CCDC6	Q16204	474 aa		18.17	■□□□□ 0.5
CERS4-215	ENST00000599275	PCSK7	Q16549	785 aa		18.17	■□□□□ 0.5
CERS4-215	ENST00000599275	CCNG2	Q16589	344 aa		18.17	■□□□□ 0.5
CERS4-215	ENST00000599275	PAPD7	Q5XG87	772 aa	Known RBP	18.17	■□□□□ 0.5
CERS4-215	ENST00000599275	SEL1L3	Q68CR1	1132 aa		18.17	■□□□□ 0.5

Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms