RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 GCNT7Q6ZNI0 430 aa13.02□□□□□ -0.33
COL5A1-206ENST00000465877 TTC7BQ86TV6 843 aa13.02□□□□□ -0.33
COL5A1-206ENST00000465877 IQCHQ86VS3 1027 aa13.02□□□□□ -0.33
COL5A1-206ENST00000465877 KATNAL2Q8IYT4 538 aa13.02□□□□□ -0.33
COL5A1-206ENST00000465877 TXLNBQ8N3L3 684 aa13.02□□□□□ -0.33
COL5A1-206ENST00000465877 TEX26Q8N6G2 289 aa13.02□□□□□ -0.33
COL5A1-206ENST00000465877 HCAR2Q8TDS4 363 aa13.02□□□□□ -0.33
COL5A1-206ENST00000465877 LRRN4Q8WUT4 740 aa13.02□□□□□ -0.33
COL5A1-206ENST00000465877 KRT35Q92764 455 aa13.02□□□□□ -0.33
COL5A1-206ENST00000465877 FATE1Q969F0 183 aa13.02□□□□□ -0.33
COL5A1-206ENST00000465877 SKA1Q96BD8 255 aa13.02□□□□□ -0.33
COL5A1-206ENST00000465877 NSMCE3Q96MG7 304 aa13.02□□□□□ -0.33
COL5A1-206ENST00000465877 OLFM3Q96PB7 478 aa13.02□□□□□ -0.33
COL5A1-206ENST00000465877 TSGA13Q96PP4 275 aa13.02□□□□□ -0.33
COL5A1-206ENST00000465877 NUDCD1Q96RS6 583 aa13.02□□□□□ -0.33
COL5A1-206ENST00000465877 NT5MQ9NPB1 228 aa13.02□□□□□ -0.33
COL5A1-206ENST00000465877 SCUBE2Q9NQ36 999 aa13.02□□□□□ -0.33
COL5A1-206ENST00000465877 TTLL3Q9Y4R7 772 aa13.02□□□□□ -0.33
COL5A1-206ENST00000465877 HEY1Q9Y5J3 304 aa13.02□□□□□ -0.33
COL5A1-206ENST00000465877 DUSP10Q9Y6W6 482 aa13.02□□□□□ -0.33
COL5A1-206ENST00000465877 KNL1Q8NG31 2342 aa13.02□□□□□ -0.33
COL5A1-206ENST00000465877 TDRD6O60522 2096 aaKnown RBP13.01□□□□□ -0.33
COL5A1-206ENST00000465877 NCOR2Q9Y618 2525 aa13.01□□□□□ -0.33
COL5A1-206ENST00000465877 A0A0U1RQJ8 604 aa13.01□□□□□ -0.33
COL5A1-206ENST00000465877 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.01□□□□□ -0.33
COL5A1-206ENST00000465877 TTC24A2A3L6 582 aaPredicted RBP13.01□□□□□ -0.33
COL5A1-206ENST00000465877 GRID2IPA4D2P6 1211 aa13.01□□□□□ -0.33
COL5A1-206ENST00000465877 TRAFD1O14545 582 aaPredicted RBP13.01□□□□□ -0.33
COL5A1-206ENST00000465877 SOCS5O75159 536 aa13.01□□□□□ -0.33
COL5A1-206ENST00000465877 TIMP2P16035 220 aa13.01□□□□□ -0.33
COL5A1-206ENST00000465877 ZFXP17010 805 aaPredicted RBP13.01□□□□□ -0.33
COL5A1-206ENST00000465877 CCNCP24863 283 aa13.01□□□□□ -0.33
COL5A1-206ENST00000465877 NOVA1P51513 510 aaKnown RBP13.01□□□□□ -0.33
COL5A1-206ENST00000465877 NAP1L1P55209 391 aaKnown RBP13.01□□□□□ -0.33
COL5A1-206ENST00000465877 NXPH1P58417 271 aa13.01□□□□□ -0.33
COL5A1-206ENST00000465877 PPIDQ08752 370 aaKnown RBP13.01□□□□□ -0.33
COL5A1-206ENST00000465877 STAT4Q14765 748 aa13.01□□□□□ -0.33
COL5A1-206ENST00000465877 UGP2Q16851 508 aa13.01□□□□□ -0.33
COL5A1-206ENST00000465877 RALGPS1Q5JS13 557 aa13.01□□□□□ -0.33
COL5A1-206ENST00000465877 ALG1LQ6GMV1 187 aa13.01□□□□□ -0.33
COL5A1-206ENST00000465877 PSAPL1Q6NUJ1 521 aa13.01□□□□□ -0.33
COL5A1-206ENST00000465877 NPNTQ6UXI9 565 aa13.01□□□□□ -0.33
COL5A1-206ENST00000465877 KYAT3Q6YP21 454 aaKnown RBP13.01□□□□□ -0.33
COL5A1-206ENST00000465877 CCDC50Q8IVM0 306 aa13.01□□□□□ -0.33
COL5A1-206ENST00000465877 CCDC13Q8IYE1 715 aa13.01□□□□□ -0.33
COL5A1-206ENST00000465877 PAF1Q8N7H5 531 aa13.01□□□□□ -0.33
COL5A1-206ENST00000465877 MFSD2AQ8NA29 543 aa13.01□□□□□ -0.33
COL5A1-206ENST00000465877 DENND6BQ8NEG7 585 aa13.01□□□□□ -0.33
COL5A1-206ENST00000465877 DEFB124Q8NES8 71 aa13.01□□□□□ -0.33
COL5A1-206ENST00000465877 CXorf40AQ8TE69 158 aa13.01□□□□□ -0.33
COL5A1-206ENST00000465877 RBM41Q96IZ5 413 aaKnown RBP13.01□□□□□ -0.33
COL5A1-206ENST00000465877 FEM1CQ96JP0 617 aa13.01□□□□□ -0.33
COL5A1-206ENST00000465877 WRAP53Q9BUR4 548 aaKnown RBP13.01□□□□□ -0.33
COL5A1-206ENST00000465877 MAK16Q9BXY0 300 aaKnown RBP13.01□□□□□ -0.33
COL5A1-206ENST00000465877 SLC17A9Q9BYT1 436 aa13.01□□□□□ -0.33
COL5A1-206ENST00000465877 POLR1EQ9GZS1 481 aaKnown RBP13.01□□□□□ -0.33
COL5A1-206ENST00000465877 PCDH12Q9NPG4 1184 aa13.01□□□□□ -0.33
COL5A1-206ENST00000465877 GDF3Q9NR23 364 aa13.01□□□□□ -0.33
COL5A1-206ENST00000465877 TM7SF3Q9NS93 570 aa13.01□□□□□ -0.33
COL5A1-206ENST00000465877 TRIM10Q9UDY6 481 aa13.01□□□□□ -0.33
COL5A1-206ENST00000465877 ATP8A1Q9Y2Q0 1164 aa13.01□□□□□ -0.33
COL5A1-206ENST00000465877 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.01□□□□□ -0.33
COL5A1-206ENST00000465877 ASPMQ8IZT6 3477 aa13.01□□□□□ -0.33
COL5A1-206ENST00000465877 CABIN1Q9Y6J0 2220 aa13□□□□□ -0.33
COL5A1-206ENST00000465877 hCG_1818297A0A087WSY0 165 aa13□□□□□ -0.33
COL5A1-206ENST00000465877 MACROD2A1Z1Q3 448 aa13□□□□□ -0.33
COL5A1-206ENST00000465877 IGLON5A6NGN9 336 aa13□□□□□ -0.33
COL5A1-206ENST00000465877 A6NNZ2 444 aa13□□□□□ -0.33
COL5A1-206ENST00000465877 TLR4O00206 839 aa13□□□□□ -0.33
COL5A1-206ENST00000465877 PPP1R12AO14974 1030 aaPredicted RBP13□□□□□ -0.33
COL5A1-206ENST00000465877 MATN3O15232 486 aa13□□□□□ -0.33
COL5A1-206ENST00000465877 RAD51BO15315 384 aa13□□□□□ -0.33
COL5A1-206ENST00000465877 MAGEC1O60732 1142 aa13□□□□□ -0.33
COL5A1-206ENST00000465877 NEBLO76041 1014 aa13□□□□□ -0.33
COL5A1-206ENST00000465877 KCNK5O95279 499 aa13□□□□□ -0.33
COL5A1-206ENST00000465877 CPP00450 1065 aa13□□□□□ -0.33
COL5A1-206ENST00000465877 PRKCGP05129 697 aa13□□□□□ -0.33
COL5A1-206ENST00000465877 HLA-DQB2P05538 268 aa13□□□□□ -0.33
COL5A1-206ENST00000465877 THEGLP0DJG4 465 aa13□□□□□ -0.33
COL5A1-206ENST00000465877 KRT10P13645 584 aa13□□□□□ -0.33
COL5A1-206ENST00000465877 CD59P13987 128 aa13□□□□□ -0.33
COL5A1-206ENST00000465877 ITIH2P19823 946 aa13□□□□□ -0.33
COL5A1-206ENST00000465877 CSRP1P21291 193 aaKnown RBP13□□□□□ -0.33
COL5A1-206ENST00000465877 IL9RQ01113 521 aa13□□□□□ -0.33
COL5A1-206ENST00000465877 KIF5AQ12840 1032 aa13□□□□□ -0.33
COL5A1-206ENST00000465877 OVGP1Q12889 678 aa13□□□□□ -0.33
COL5A1-206ENST00000465877 TRAF2Q12933 501 aa13□□□□□ -0.33
COL5A1-206ENST00000465877 SLC14A1Q13336 389 aa13□□□□□ -0.33
COL5A1-206ENST00000465877 TFDP2Q14188 446 aa13□□□□□ -0.33
COL5A1-206ENST00000465877 TFDP3Q5H9I0 405 aa13□□□□□ -0.33
COL5A1-206ENST00000465877 ERAP2Q6P179 960 aa13□□□□□ -0.33
COL5A1-206ENST00000465877 PTAR1Q7Z6K3 402 aaPredicted RBP13□□□□□ -0.33
COL5A1-206ENST00000465877 ABI3BPQ7Z7G0 1075 aa13□□□□□ -0.33
COL5A1-206ENST00000465877 NAXDQ8IW45 347 aa13□□□□□ -0.33
COL5A1-206ENST00000465877 LRRC57Q8N9N7 239 aa13□□□□□ -0.33
COL5A1-206ENST00000465877 CCNYQ8ND76 341 aa13□□□□□ -0.33
COL5A1-206ENST00000465877 CCDC112Q8NEF3 446 aa13□□□□□ -0.33
COL5A1-206ENST00000465877 EXD1Q8NHP7 514 aa13□□□□□ -0.33
COL5A1-206ENST00000465877 PDCD6IPQ8WUM4 868 aaKnown RBP13□□□□□ -0.33
COL5A1-206ENST00000465877 SPOCK2Q92563 424 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms