RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 SLC13A1Q9BZW2 595 aa21.25■□□□□ 0.99
VSX1-206ENST00000444511 TCEAL2Q9H3H9 227 aaPredicted RBP21.25■□□□□ 0.99
VSX1-206ENST00000444511 SUV39H2Q9H5I1 410 aa21.25■□□□□ 0.99
VSX1-206ENST00000444511 TDRD6O60522 2096 aaKnown RBP21.24■□□□□ 0.99
VSX1-206ENST00000444511 CSO75390 466 aaKnown RBP21.24■□□□□ 0.99
VSX1-206ENST00000444511 RNF8O76064 485 aa21.24■□□□□ 0.99
VSX1-206ENST00000444511 EIF4A3P38919 411 aaKnown RBP21.24■□□□□ 0.99
VSX1-206ENST00000444511 PAPOLAP51003 745 aaKnown RBP21.24■□□□□ 0.99
VSX1-206ENST00000444511 C1orf61Q13536 156 aa21.24■□□□□ 0.99
VSX1-206ENST00000444511 LRRC14Q15048 493 aa21.24■□□□□ 0.99
VSX1-206ENST00000444511 IRF4Q15306 451 aa21.24■□□□□ 0.99
VSX1-206ENST00000444511 NR0B2Q15466 257 aa21.24■□□□□ 0.99
VSX1-206ENST00000444511 CA9Q16790 459 aa21.24■□□□□ 0.99
VSX1-206ENST00000444511 UGP2Q16851 508 aa21.24■□□□□ 0.99
VSX1-206ENST00000444511 TBC1D25Q3MII6 688 aa21.24■□□□□ 0.99
VSX1-206ENST00000444511 ERMARDQ5T6L9 678 aa21.24■□□□□ 0.99
VSX1-206ENST00000444511 ERAP2Q6P179 960 aa21.24■□□□□ 0.99
VSX1-206ENST00000444511 EFL1Q7Z2Z2 1120 aaKnown RBP21.24■□□□□ 0.99
VSX1-206ENST00000444511 GLMNQ92990 594 aa21.24■□□□□ 0.99
VSX1-206ENST00000444511 ZNF641Q96N77 438 aaPredicted RBP21.24■□□□□ 0.99
VSX1-206ENST00000444511 SNRNP25Q9BV90 132 aaKnown RBP21.24■□□□□ 0.99
VSX1-206ENST00000444511 SLC39A8Q9C0K1 460 aa21.24■□□□□ 0.99
VSX1-206ENST00000444511 HAUS4Q9H6D7 363 aa21.24■□□□□ 0.99
VSX1-206ENST00000444511 TMEM63CQ9P1W3 806 aa21.24■□□□□ 0.99
VSX1-206ENST00000444511 COQ6Q9Y2Z9 468 aa21.24■□□□□ 0.99
VSX1-206ENST00000444511 ATRXP46100 2492 aa21.23■□□□□ 0.99
VSX1-206ENST00000444511 TSPAN11A1L157 253 aa21.23■□□□□ 0.99
VSX1-206ENST00000444511 TMEM191CA6NGB0 347 aa21.23■□□□□ 0.99
VSX1-206ENST00000444511 PRPSAP2O60256 369 aa21.23■□□□□ 0.99
VSX1-206ENST00000444511 USP12O75317 370 aa21.23■□□□□ 0.99
VSX1-206ENST00000444511 ANXA6P08133 673 aa21.23■□□□□ 0.99
VSX1-206ENST00000444511 RPIAP49247 311 aa21.23■□□□□ 0.99
VSX1-206ENST00000444511 ADKP55263 362 aaKnown RBP21.23■□□□□ 0.99
VSX1-206ENST00000444511 PPARDQ03181 441 aa21.23■□□□□ 0.99
VSX1-206ENST00000444511 GUSBP11Q6P575 273 aa21.23■□□□□ 0.99
VSX1-206ENST00000444511 BRAT1Q6PJG6 821 aa21.23■□□□□ 0.99
VSX1-206ENST00000444511 RFX8Q6ZV50 586 aa21.23■□□□□ 0.99
VSX1-206ENST00000444511 TBATAQ96M53 351 aa21.23■□□□□ 0.99
VSX1-206ENST00000444511 TUBGCP5Q96RT8 1024 aa21.23■□□□□ 0.99
VSX1-206ENST00000444511 PEBP4Q96S96 227 aa21.23■□□□□ 0.99
VSX1-206ENST00000444511 LRRC61Q9BV99 259 aa21.23■□□□□ 0.99
VSX1-206ENST00000444511 PCDH12Q9NPG4 1184 aa21.23■□□□□ 0.99
VSX1-206ENST00000444511 MYLKQ15746 1914 aa21.23■□□□□ 0.99
VSX1-206ENST00000444511 EME2A4GXA9 379 aaPredicted RBP21.22■□□□□ 0.99
VSX1-206ENST00000444511 GCATO75600 419 aa21.22■□□□□ 0.99
VSX1-206ENST00000444511 PALMO75781 387 aa21.22■□□□□ 0.99
VSX1-206ENST00000444511 FTLP02792 175 aaPredicted RBP21.22■□□□□ 0.99
VSX1-206ENST00000444511 MPOP05164 745 aa21.22■□□□□ 0.99
VSX1-206ENST00000444511 C6P13671 934 aa21.22■□□□□ 0.99
VSX1-206ENST00000444511 ERCC2P18074 760 aa21.22■□□□□ 0.99
VSX1-206ENST00000444511 GABREP78334 506 aa21.22■□□□□ 0.99
VSX1-206ENST00000444511 PPP6R3Q5H9R7 873 aaPredicted RBP21.22■□□□□ 0.99
VSX1-206ENST00000444511 ZNF571Q7Z3V5 609 aaPredicted RBP21.22■□□□□ 0.99
VSX1-206ENST00000444511 CAMK1DQ8IU85 385 aa21.22■□□□□ 0.99
VSX1-206ENST00000444511 LSMEM2Q8N112 164 aa21.22■□□□□ 0.99
VSX1-206ENST00000444511 ARFGAP1Q8N6T3 406 aa21.22■□□□□ 0.99
VSX1-206ENST00000444511 PAF1Q8N7H5 531 aa21.22■□□□□ 0.99
VSX1-206ENST00000444511 KCTD15Q96SI1 283 aaPredicted RBP21.22■□□□□ 0.99
VSX1-206ENST00000444511 ATP13A3Q9H7F0 1226 aa21.22■□□□□ 0.99
VSX1-206ENST00000444511 SP110Q9HB58 689 aa21.22■□□□□ 0.99
VSX1-206ENST00000444511 AIPL1Q9NZN9 384 aa21.22■□□□□ 0.99
VSX1-206ENST00000444511 CNOT8Q9UFF9 292 aaKnown RBP21.22■□□□□ 0.99
VSX1-206ENST00000444511 PNMA8BQ9ULN7 279 aaPredicted RBP21.22■□□□□ 0.99
VSX1-206ENST00000444511 A0A1W2PQC6 194 aa21.21■□□□□ 0.99
VSX1-206ENST00000444511 EIF4E1BA6NMX2 242 aaKnown RBP21.21■□□□□ 0.99
VSX1-206ENST00000444511 TMEM110-MUSTN1A8MSY1 372 aa21.21■□□□□ 0.99
VSX1-206ENST00000444511 LMO7DNF2Z398 122 aa21.21■□□□□ 0.99
VSX1-206ENST00000444511 DFFAO00273 331 aa21.21■□□□□ 0.99
VSX1-206ENST00000444511 MUSKO15146 869 aa21.21■□□□□ 0.99
VSX1-206ENST00000444511 LZTS3O60299 673 aaPredicted RBP21.21■□□□□ 0.99
VSX1-206ENST00000444511 BUB1BO60566 1050 aaPredicted RBP21.21■□□□□ 0.99
VSX1-206ENST00000444511 GZMAP12544 262 aa21.21■□□□□ 0.99
VSX1-206ENST00000444511 TGM2P21980 687 aa21.21■□□□□ 0.99
VSX1-206ENST00000444511 HTR1BP28222 390 aa21.21■□□□□ 0.99
VSX1-206ENST00000444511 SERPINA4P29622 427 aa21.21■□□□□ 0.99
VSX1-206ENST00000444511 MIPP30301 263 aa21.21■□□□□ 0.99
VSX1-206ENST00000444511 CSNK1DP48730 415 aa21.21■□□□□ 0.99
VSX1-206ENST00000444511 PEX5P50542 639 aa21.21■□□□□ 0.99
VSX1-206ENST00000444511 BLKP51451 505 aa21.21■□□□□ 0.99
VSX1-206ENST00000444511 KLHL30Q0D2K2 578 aa21.21■□□□□ 0.99
VSX1-206ENST00000444511 CCDC173Q0VFZ6 552 aa21.21■□□□□ 0.99
VSX1-206ENST00000444511 ACAP1Q15027 740 aa21.21■□□□□ 0.99
VSX1-206ENST00000444511 WSCD2Q2TBF2 565 aa21.21■□□□□ 0.99
VSX1-206ENST00000444511 C6orf132Q5T0Z8 1188 aa21.21■□□□□ 0.99
VSX1-206ENST00000444511 SRLQ86TD4 932 aa21.21■□□□□ 0.99
VSX1-206ENST00000444511 TSEN2Q8NCE0 465 aaKnown RBP21.21■□□□□ 0.99
VSX1-206ENST00000444511 TPCN2Q8NHX9 752 aa21.21■□□□□ 0.99
VSX1-206ENST00000444511 FNIP1Q8TF40 1166 aa21.21■□□□□ 0.99
VSX1-206ENST00000444511 ZNF653Q96CK0 615 aa21.21■□□□□ 0.99
VSX1-206ENST00000444511 CINPQ9BW66 212 aaPredicted RBP21.21■□□□□ 0.99
VSX1-206ENST00000444511 BOCQ9BWV1 1114 aa21.21■□□□□ 0.99
VSX1-206ENST00000444511 TRIM7Q9C029 511 aa21.21■□□□□ 0.99
VSX1-206ENST00000444511 DOLKQ9UPQ8 538 aa21.21■□□□□ 0.99
VSX1-206ENST00000444511 ATP8A1Q9Y2Q0 1164 aa21.21■□□□□ 0.99
VSX1-206ENST00000444511 SCINQ9Y6U3 715 aa21.21■□□□□ 0.99
VSX1-206ENST00000444511 YY2O15391 372 aa21.2■□□□□ 0.98
VSX1-206ENST00000444511 TSHRP16473 764 aa21.2■□□□□ 0.98
VSX1-206ENST00000444511 MMP12P39900 470 aa21.2■□□□□ 0.98
VSX1-206ENST00000444511 PRKCIP41743 596 aa21.2■□□□□ 0.98
VSX1-206ENST00000444511 RGRP47804 291 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms