RNA–Protein interactions for RNA: ENST00000585894.5

RETREG3-203, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 1 (best) BASIC

Gene RETREG3, Length 1,733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-203ENST00000585894 TBC1D3KA0A087X1G2 549 aa12.76□□□□□ -0.37
RETREG3-203ENST00000585894 TBC1D3FA6NER0 549 aaPredicted RBP12.76□□□□□ -0.37
RETREG3-203ENST00000585894 PATE3B3GLJ2 98 aa12.76□□□□□ -0.37
RETREG3-203ENST00000585894 TBC1D3LB9A6J9 549 aa12.76□□□□□ -0.37
RETREG3-203ENST00000585894 F5H423 210 aaPredicted RBP12.76□□□□□ -0.37
RETREG3-203ENST00000585894 H7C0C1 242 aa12.76□□□□□ -0.37
RETREG3-203ENST00000585894 KCNK3O14649 394 aa12.76□□□□□ -0.37
RETREG3-203ENST00000585894 SPINT1O43278 529 aa12.76□□□□□ -0.37
RETREG3-203ENST00000585894 PLRG1O43660 514 aaKnown RBP12.76□□□□□ -0.37
RETREG3-203ENST00000585894 IGHV4-34P06331 123 aa12.76□□□□□ -0.37
RETREG3-203ENST00000585894 TBC1D3HP0C7X1 549 aa12.76□□□□□ -0.37
RETREG3-203ENST00000585894 ADRB3P13945 408 aa12.76□□□□□ -0.37
RETREG3-203ENST00000585894 MAT2AP31153 395 aaKnown RBP12.76□□□□□ -0.37
RETREG3-203ENST00000585894 CXCR5P32302 372 aa12.76□□□□□ -0.37
RETREG3-203ENST00000585894 ATP5OP48047 213 aa12.76□□□□□ -0.37
RETREG3-203ENST00000585894 NR2C2P49116 596 aa12.76□□□□□ -0.37
RETREG3-203ENST00000585894 NEK3P51956 506 aa12.76□□□□□ -0.37
RETREG3-203ENST00000585894 RAD51Q06609 339 aa12.76□□□□□ -0.37
RETREG3-203ENST00000585894 NIPAL4Q0D2K0 466 aa12.76□□□□□ -0.37
RETREG3-203ENST00000585894 SPEM2Q0P670 501 aa12.76□□□□□ -0.37
RETREG3-203ENST00000585894 ZNF569Q5MCW4 686 aa12.76□□□□□ -0.37
RETREG3-203ENST00000585894 TBC1D3GQ6DHY5 549 aa12.76□□□□□ -0.37
RETREG3-203ENST00000585894 TBC1D3CQ6IPX1 549 aa12.76□□□□□ -0.37
RETREG3-203ENST00000585894 TCEAL6Q6IPX3 200 aa12.76□□□□□ -0.37
RETREG3-203ENST00000585894 FBXL19Q6PCT2 694 aa12.76□□□□□ -0.37
RETREG3-203ENST00000585894 RGL4Q8IZJ4 473 aa12.76□□□□□ -0.37
RETREG3-203ENST00000585894 TBC1D3Q8IZP1 549 aaPredicted RBP12.76□□□□□ -0.37
RETREG3-203ENST00000585894 SLC35F6Q8N357 371 aa12.76□□□□□ -0.37
RETREG3-203ENST00000585894 TFB1MQ8WVM0 346 aaKnown RBP12.76□□□□□ -0.37
RETREG3-203ENST00000585894 KLK6Q92876 244 aa12.76□□□□□ -0.37
RETREG3-203ENST00000585894 TCEAL3Q969E4 200 aa12.76□□□□□ -0.37
RETREG3-203ENST00000585894 AGAP3Q96P47 875 aa12.76□□□□□ -0.37
RETREG3-203ENST00000585894 QKIQ96PU8 341 aaKnown RBP eCLIP12.76□□□□□ -0.373e-6■■□□□ 11.6
RETREG3-203ENST00000585894 NUDCD1Q96RS6 583 aa12.76□□□□□ -0.37
RETREG3-203ENST00000585894 IL12RB2Q99665 862 aa12.76□□□□□ -0.37
RETREG3-203ENST00000585894 OSBPL1AQ9BXW6 950 aa12.76□□□□□ -0.37
RETREG3-203ENST00000585894 HDAC8Q9BY41 377 aa12.76□□□□□ -0.37
RETREG3-203ENST00000585894 CPEB1Q9BZB8 566 aaKnown RBP12.76□□□□□ -0.37
RETREG3-203ENST00000585894 MIR1-1HGQ9H1L0 117 aa12.76□□□□□ -0.37
RETREG3-203ENST00000585894 EBF2Q9HAK2 575 aa12.76□□□□□ -0.37
RETREG3-203ENST00000585894 PARD6AQ9NPB6 346 aa12.76□□□□□ -0.37
RETREG3-203ENST00000585894 FSCN3Q9NQT6 498 aa12.76□□□□□ -0.37
RETREG3-203ENST00000585894 GMEB2Q9UKD1 530 aa12.76□□□□□ -0.37
RETREG3-203ENST00000585894 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.76□□□□□ -0.37
RETREG3-203ENST00000585894 PTPRZ1P23471 2315 aaPredicted RBP12.75□□□□□ -0.37
RETREG3-203ENST00000585894 BCLAF3A2AJT9 711 aaKnown RBP12.75□□□□□ -0.37
RETREG3-203ENST00000585894 METTL12A8MUP2 240 aa12.75□□□□□ -0.37
RETREG3-203ENST00000585894 NEBLO76041 1014 aa12.75□□□□□ -0.37
RETREG3-203ENST00000585894 TJP3O95049 919 aa12.75□□□□□ -0.37
RETREG3-203ENST00000585894 RETP07949 1114 aa12.75□□□□□ -0.37
RETREG3-203ENST00000585894 TIMP2P16035 220 aa12.75□□□□□ -0.37
RETREG3-203ENST00000585894 MPLP40238 635 aa12.75□□□□□ -0.37
RETREG3-203ENST00000585894 CETN2P41208 172 aa12.75□□□□□ -0.37
RETREG3-203ENST00000585894 CSNK1DP48730 415 aa12.75□□□□□ -0.37
RETREG3-203ENST00000585894 IFI35P80217 286 aaPredicted RBP12.75□□□□□ -0.37
RETREG3-203ENST00000585894 NSUN2Q08J23 767 aaKnown RBP eCLIP12.75□□□□□ -0.37
RETREG3-203ENST00000585894 TRAF2Q12933 501 aa12.75□□□□□ -0.37
RETREG3-203ENST00000585894 PTPRRQ15256 657 aa12.75□□□□□ -0.37
RETREG3-203ENST00000585894 KIAA0895LQ68EN5 471 aa12.75□□□□□ -0.37
RETREG3-203ENST00000585894 ALYREFQ86V81 257 aaKnown RBP12.75□□□□□ -0.37
RETREG3-203ENST00000585894 BBS5Q8N3I7 341 aa12.75□□□□□ -0.37
RETREG3-203ENST00000585894 OR2T34Q8NGX1 318 aa12.75□□□□□ -0.37
RETREG3-203ENST00000585894 PDCD6IPQ8WUM4 868 aaKnown RBP12.75□□□□□ -0.37
RETREG3-203ENST00000585894 ATG4AQ8WYN0 398 aa12.75□□□□□ -0.37
RETREG3-203ENST00000585894 FATE1Q969F0 183 aa12.75□□□□□ -0.37
RETREG3-203ENST00000585894 LRIG1Q96JA1 1093 aa12.75□□□□□ -0.37
RETREG3-203ENST00000585894 SUV39H2Q9H5I1 410 aa12.75□□□□□ -0.37
RETREG3-203ENST00000585894 ATP13A3Q9H7F0 1226 aa12.75□□□□□ -0.37
RETREG3-203ENST00000585894 EIF2B4Q9UI10 523 aaKnown RBP12.75□□□□□ -0.37
RETREG3-203ENST00000585894 EFR3BQ9Y2G0 817 aa12.75□□□□□ -0.37
RETREG3-203ENST00000585894 KNL1Q8NG31 2342 aa12.75□□□□□ -0.37
RETREG3-203ENST00000585894 LRRC72A6NJI9 287 aa12.74□□□□□ -0.37
RETREG3-203ENST00000585894 TRAFD1O14545 582 aaPredicted RBP12.74□□□□□ -0.37
RETREG3-203ENST00000585894 SLC7A4O43246 635 aa12.74□□□□□ -0.37
RETREG3-203ENST00000585894 RNGTTO60942 597 aaKnown RBP12.74□□□□□ -0.37
RETREG3-203ENST00000585894 PCDH8O95206 1070 aa12.74□□□□□ -0.37
RETREG3-203ENST00000585894 ATP1A1P05023 1023 aaKnown RBP12.74□□□□□ -0.37
RETREG3-203ENST00000585894 PTPN3P26045 913 aa12.74□□□□□ -0.37
RETREG3-203ENST00000585894 RBL1P28749 1068 aa12.74□□□□□ -0.37
RETREG3-203ENST00000585894 SERPINA4P29622 427 aa12.74□□□□□ -0.37
RETREG3-203ENST00000585894 HSPA9P38646 679 aaKnown RBP12.74□□□□□ -0.37
RETREG3-203ENST00000585894 EIF3EP60228 445 aaKnown RBP12.74□□□□□ -0.37
RETREG3-203ENST00000585894 AP1S1P61966 158 aa12.74□□□□□ -0.37
RETREG3-203ENST00000585894 BCL2L1Q07817 233 aa12.74□□□□□ -0.37
RETREG3-203ENST00000585894 WASHC5Q12768 1159 aa12.74□□□□□ -0.37
RETREG3-203ENST00000585894 SFSWAPQ12872 951 aaKnown RBP12.74□□□□□ -0.37
RETREG3-203ENST00000585894 KLF1Q13351 362 aaPredicted RBP12.74□□□□□ -0.37
RETREG3-203ENST00000585894 SEL1L2Q5TEA6 688 aa12.74□□□□□ -0.37
RETREG3-203ENST00000585894 SEL1L3Q68CR1 1132 aa12.74□□□□□ -0.37
RETREG3-203ENST00000585894 LAYNQ6UX15 382 aa12.74□□□□□ -0.37
RETREG3-203ENST00000585894 TTC7BQ86TV6 843 aa12.74□□□□□ -0.37
RETREG3-203ENST00000585894 ZCCHC9Q8N567 271 aaKnown RBP12.74□□□□□ -0.37
RETREG3-203ENST00000585894 PAF1Q8N7H5 531 aa12.74□□□□□ -0.37
RETREG3-203ENST00000585894 CADM4Q8NFZ8 388 aa12.74□□□□□ -0.37
RETREG3-203ENST00000585894 ARRDC2Q8TBH0 407 aa12.74□□□□□ -0.37
RETREG3-203ENST00000585894 RUBCNQ92622 972 aa12.74□□□□□ -0.37
RETREG3-203ENST00000585894 SMIM14Q96QK8 99 aa12.74□□□□□ -0.37
RETREG3-203ENST00000585894 TUBGCP5Q96RT8 1024 aa12.74□□□□□ -0.37
RETREG3-203ENST00000585894 POLR1EQ9GZS1 481 aaKnown RBP12.74□□□□□ -0.37
RETREG3-203ENST00000585894 ATP8A1Q9Y2Q0 1164 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms