RNA–Protein interactions for RNA: ENST00000467996.1

RNF13-208, Transcript of ring finger protein 13, humanhuman

TSL 5

Gene RNF13, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13-208ENST00000467996 KLF8O95600 359 aaPredicted RBP11.97□□□□□ -0.49
RNF13-208ENST00000467996 POP4O95707 220 aaKnown RBP11.97□□□□□ -0.49
RNF13-208ENST00000467996 CTSLP07711 333 aa11.97□□□□□ -0.49
RNF13-208ENST00000467996 CHRNB1P11230 501 aa11.97□□□□□ -0.49
RNF13-208ENST00000467996 NTSR1P30989 418 aa11.97□□□□□ -0.49
RNF13-208ENST00000467996 ADRA1AP35348 466 aa11.97□□□□□ -0.49
RNF13-208ENST00000467996 PLTPP55058 493 aa11.97□□□□□ -0.49
RNF13-208ENST00000467996 VSNL1P62760 191 aa11.97□□□□□ -0.49
RNF13-208ENST00000467996 CDK16Q00536 496 aa11.97□□□□□ -0.49
RNF13-208ENST00000467996 CAV1Q03135 178 aa11.97□□□□□ -0.49
RNF13-208ENST00000467996 HLTFQ14527 1009 aaKnown RBP eCLIP11.97□□□□□ -0.49
RNF13-208ENST00000467996 UBXN2BQ14CS0 331 aa11.97□□□□□ -0.49
RNF13-208ENST00000467996 NAPEPLDQ6IQ20 393 aa11.97□□□□□ -0.49
RNF13-208ENST00000467996 WDR93Q6P2C0 686 aa11.97□□□□□ -0.49
RNF13-208ENST00000467996 TRMT11Q7Z4G4 463 aaKnown RBP11.97□□□□□ -0.49
RNF13-208ENST00000467996 GSPT2Q8IYD1 628 aaKnown RBP11.97□□□□□ -0.49
RNF13-208ENST00000467996 RPLP0P6Q8NHW5 317 aa11.97□□□□□ -0.49
RNF13-208ENST00000467996 GRIN3AQ8TCU5 1115 aa11.97□□□□□ -0.49
RNF13-208ENST00000467996 SHDQ96IW2 340 aa11.97□□□□□ -0.49
RNF13-208ENST00000467996 FEM1CQ96JP0 617 aa11.97□□□□□ -0.49
RNF13-208ENST00000467996 GABRG3Q99928 467 aa11.97□□□□□ -0.49
RNF13-208ENST00000467996 TBL1YQ9BQ87 522 aa11.97□□□□□ -0.49
RNF13-208ENST00000467996 HEPHQ9BQS7 1158 aa11.97□□□□□ -0.49
RNF13-208ENST00000467996 CPEB1Q9BZB8 566 aaKnown RBP11.97□□□□□ -0.49
RNF13-208ENST00000467996 FAM129AQ9BZQ8 928 aa11.97□□□□□ -0.49
RNF13-208ENST00000467996 ATP13A3Q9H7F0 1226 aa11.97□□□□□ -0.49
RNF13-208ENST00000467996 LTB4R2Q9NPC1 389 aa11.97□□□□□ -0.49
RNF13-208ENST00000467996 PRSS16Q9NQE7 514 aa11.97□□□□□ -0.49
RNF13-208ENST00000467996 IL36AQ9UHA7 158 aa11.97□□□□□ -0.49
RNF13-208ENST00000467996 MRPS17Q9Y2R5 130 aaKnown RBP11.97□□□□□ -0.49
RNF13-208ENST00000467996 MTF2Q9Y483 593 aaPredicted RBP11.97□□□□□ -0.49
RNF13-208ENST00000467996 PCDHGC4Q9Y5F7 938 aa11.97□□□□□ -0.49
RNF13-208ENST00000467996 WASF2Q9Y6W5 498 aa11.97□□□□□ -0.49
RNF13-208ENST00000467996 SCN8AQ9UQD0 1980 aa11.97□□□□□ -0.49
RNF13-208ENST00000467996 KANSL1LA0AUZ9 987 aa11.96□□□□□ -0.49
RNF13-208ENST00000467996 ALOX15BO15296 676 aa11.96□□□□□ -0.49
RNF13-208ENST00000467996 ADAM23O75077 832 aa11.96□□□□□ -0.49
RNF13-208ENST00000467996 SOCS5O75159 536 aa11.96□□□□□ -0.49
RNF13-208ENST00000467996 AGTP01019 485 aa11.96□□□□□ -0.49
RNF13-208ENST00000467996 MYBL2P10244 700 aa11.96□□□□□ -0.49
RNF13-208ENST00000467996 HOXB2P14652 356 aa11.96□□□□□ -0.49
RNF13-208ENST00000467996 CA4P22748 312 aa11.96□□□□□ -0.49
RNF13-208ENST00000467996 SERPINA4P29622 427 aa11.96□□□□□ -0.49
RNF13-208ENST00000467996 GRIA1P42261 906 aa11.96□□□□□ -0.49
RNF13-208ENST00000467996 ZXDAP98168 799 aa11.96□□□□□ -0.49
RNF13-208ENST00000467996 RAD51Q06609 339 aa11.96□□□□□ -0.49
RNF13-208ENST00000467996 BCL2L1Q07817 233 aa11.96□□□□□ -0.49
RNF13-208ENST00000467996 LRRC32Q14392 662 aa11.96□□□□□ -0.49
RNF13-208ENST00000467996 ELAVL3Q14576 367 aaKnown RBP11.96□□□□□ -0.49
RNF13-208ENST00000467996 GRM3Q14832 879 aa11.96□□□□□ -0.49
RNF13-208ENST00000467996 PPP1R21Q6ZMI0 780 aa11.96□□□□□ -0.49
RNF13-208ENST00000467996 Q6ZS52 159 aa11.96□□□□□ -0.49
RNF13-208ENST00000467996 KDELC2Q7Z4H8 507 aa11.96□□□□□ -0.49
RNF13-208ENST00000467996 CAMK1DQ8IU85 385 aa11.96□□□□□ -0.49
RNF13-208ENST00000467996 STK40Q8N2I9 435 aa11.96□□□□□ -0.49
RNF13-208ENST00000467996 EIF1ADQ8N9N8 165 aaKnown RBP11.96□□□□□ -0.49
RNF13-208ENST00000467996 TXNDC5Q8NBS9 432 aaKnown RBP11.96□□□□□ -0.49
RNF13-208ENST00000467996 MCUQ8NE86 351 aa11.96□□□□□ -0.49
RNF13-208ENST00000467996 OR8D1Q8WZ84 308 aa11.96□□□□□ -0.49
RNF13-208ENST00000467996 ERLEC1Q96DZ1 483 aa11.96□□□□□ -0.49
RNF13-208ENST00000467996 IFT43Q96FT9 208 aa11.96□□□□□ -0.49
RNF13-208ENST00000467996 PWWP2AQ96N64 755 aa11.96□□□□□ -0.49
RNF13-208ENST00000467996 SERPINB12Q96P63 405 aa11.96□□□□□ -0.49
RNF13-208ENST00000467996 TRIB3Q96RU7 358 aa11.96□□□□□ -0.49
RNF13-208ENST00000467996 APOL2Q9BQE5 337 aa11.96□□□□□ -0.49
RNF13-208ENST00000467996 PARD6BQ9BYG5 372 aa11.96□□□□□ -0.49
RNF13-208ENST00000467996 FOXQ1Q9C009 403 aa11.96□□□□□ -0.49
RNF13-208ENST00000467996 TBC1D17Q9HA65 648 aa11.96□□□□□ -0.49
RNF13-208ENST00000467996 SUN2Q9UH99 717 aa11.96□□□□□ -0.49
RNF13-208ENST00000467996 RAB21Q9UL25 225 aa11.96□□□□□ -0.49
RNF13-208ENST00000467996 NFU1Q9UMS0 254 aa11.96□□□□□ -0.49
RNF13-208ENST00000467996 CHKBQ9Y259 395 aa11.96□□□□□ -0.49
RNF13-208ENST00000467996 RAI2Q9Y5P3 530 aa11.96□□□□□ -0.49
RNF13-208ENST00000467996 LOC285095A0A1B0GVY8 99 aa11.95□□□□□ -0.5
RNF13-208ENST00000467996 TRAFD1O14545 582 aaPredicted RBP11.95□□□□□ -0.5
RNF13-208ENST00000467996 HTRA2O43464 458 aaPredicted RBP11.95□□□□□ -0.5
RNF13-208ENST00000467996 FZD6O60353 706 aa11.95□□□□□ -0.5
RNF13-208ENST00000467996 LEFTY1O75610 366 aa11.95□□□□□ -0.5
RNF13-208ENST00000467996 PRLP01236 227 aa11.95□□□□□ -0.5
RNF13-208ENST00000467996 UGT2B4P06133 528 aa11.95□□□□□ -0.5
RNF13-208ENST00000467996 PDHA1P08559 390 aa11.95□□□□□ -0.5
RNF13-208ENST00000467996 ATXN1LP0C7T5 689 aaKnown RBP11.95□□□□□ -0.5
RNF13-208ENST00000467996 COL9A1P20849 921 aa11.95□□□□□ -0.5
RNF13-208ENST00000467996 MCM3P25205 808 aa11.95□□□□□ -0.5
RNF13-208ENST00000467996 CHRNA4P43681 627 aa11.95□□□□□ -0.5
RNF13-208ENST00000467996 SARNPP82979 210 aaKnown RBP11.95□□□□□ -0.5
RNF13-208ENST00000467996 CDK18Q07002 472 aa11.95□□□□□ -0.5
RNF13-208ENST00000467996 MTM1Q13496 603 aa11.95□□□□□ -0.5
RNF13-208ENST00000467996 CAMK2GQ13555 558 aaPredicted RBP11.95□□□□□ -0.5
RNF13-208ENST00000467996 GALNT3Q14435 633 aa11.95□□□□□ -0.5
RNF13-208ENST00000467996 SLC1A5Q15758 541 aa11.95□□□□□ -0.5
RNF13-208ENST00000467996 HSF5Q4G112 596 aaPredicted RBP11.95□□□□□ -0.5
RNF13-208ENST00000467996 ARSIQ5FYB1 569 aa11.95□□□□□ -0.5
RNF13-208ENST00000467996 SDE2Q6IQ49 451 aa11.95□□□□□ -0.5
RNF13-208ENST00000467996 KIAA1211LQ6NV74 962 aa11.95□□□□□ -0.5
RNF13-208ENST00000467996 PKN3Q6P5Z2 889 aa11.95□□□□□ -0.5
RNF13-208ENST00000467996 LRRC8BQ6P9F7 803 aa11.95□□□□□ -0.5
RNF13-208ENST00000467996 RANBP10Q6VN20 620 aa11.95□□□□□ -0.5
RNF13-208ENST00000467996 GDPD4Q6W3E5 623 aa11.95□□□□□ -0.5
RNF13-208ENST00000467996 CCNI2Q6ZMN8 369 aaPredicted RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms