RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 TLR5O60602 858 aa10.52□□□□□ -0.73
CPNE1-218ENST00000439806 PRAMEF11O60813 436 aa10.52□□□□□ -0.73
CPNE1-218ENST00000439806 KRT36O76013 467 aa10.52□□□□□ -0.73
CPNE1-218ENST00000439806 TM7SF2O76062 418 aa10.52□□□□□ -0.73
CPNE1-218ENST00000439806 PAPSS2O95340 614 aaPredicted RBP10.52□□□□□ -0.73
CPNE1-218ENST00000439806 GALTP07902 379 aa10.52□□□□□ -0.73
CPNE1-218ENST00000439806 MMP2P08253 660 aa10.52□□□□□ -0.73
CPNE1-218ENST00000439806 GM2AP17900 193 aa10.52□□□□□ -0.73
CPNE1-218ENST00000439806 ARRB2P32121 409 aa10.52□□□□□ -0.73
CPNE1-218ENST00000439806 ACVRL1P37023 503 aa10.52□□□□□ -0.73
CPNE1-218ENST00000439806 RPL14P50914 215 aaKnown RBP10.52□□□□□ -0.73
CPNE1-218ENST00000439806 CCNG1P51959 295 aa10.52□□□□□ -0.73
CPNE1-218ENST00000439806 TAS2R39P59534 338 aa10.52□□□□□ -0.73
CPNE1-218ENST00000439806 TNK2Q07912 1038 aa10.52□□□□□ -0.73
CPNE1-218ENST00000439806 ILF2Q12905 390 aaKnown RBP10.52□□□□□ -0.73
CPNE1-218ENST00000439806 DUSP4Q13115 394 aa10.52□□□□□ -0.73
CPNE1-218ENST00000439806 CUL3Q13618 768 aa10.52□□□□□ -0.73
CPNE1-218ENST00000439806 ZNF460Q14592 562 aa10.52□□□□□ -0.73
CPNE1-218ENST00000439806 RCN1Q15293 331 aa10.52□□□□□ -0.73
CPNE1-218ENST00000439806 TRMT5Q32P41 509 aaKnown RBP10.52□□□□□ -0.73
CPNE1-218ENST00000439806 ACSBG2Q5FVE4 666 aa10.52□□□□□ -0.73
CPNE1-218ENST00000439806 RTP2Q5QGT7 225 aa10.52□□□□□ -0.73
CPNE1-218ENST00000439806 VWA5B1Q5TIE3 1220 aa10.52□□□□□ -0.73
CPNE1-218ENST00000439806 SEL1L3Q68CR1 1132 aa10.52□□□□□ -0.73
CPNE1-218ENST00000439806 NADSYN1Q6IA69 706 aa10.52□□□□□ -0.73
CPNE1-218ENST00000439806 CNSTQ6PJW8 725 aa10.52□□□□□ -0.73
CPNE1-218ENST00000439806 ATG14Q6ZNE5 492 aa10.52□□□□□ -0.73
CPNE1-218ENST00000439806 CEP97Q8IW35 865 aa10.52□□□□□ -0.73
CPNE1-218ENST00000439806 FAM126BQ8IXS8 530 aa10.52□□□□□ -0.73
CPNE1-218ENST00000439806 LMNTD2Q8IXW0 634 aa10.52□□□□□ -0.73
CPNE1-218ENST00000439806 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.52□□□□□ -0.734e-6■■■□□ 17.2
CPNE1-218ENST00000439806 CENPLQ8N0S6 344 aaPredicted RBP10.52□□□□□ -0.73
CPNE1-218ENST00000439806 LRRC43Q8N309 656 aa10.52□□□□□ -0.73
CPNE1-218ENST00000439806 PDZD8Q8NEN9 1154 aa10.52□□□□□ -0.73
CPNE1-218ENST00000439806 AGR3Q8TD06 166 aa10.52□□□□□ -0.73
CPNE1-218ENST00000439806 CMTM5Q96DZ9 223 aa10.52□□□□□ -0.73
CPNE1-218ENST00000439806 FEM1CQ96JP0 617 aa10.52□□□□□ -0.73
CPNE1-218ENST00000439806 SEMA3CQ99985 751 aa10.52□□□□□ -0.73
CPNE1-218ENST00000439806 MRPL57Q9BQC6 102 aaKnown RBP10.52□□□□□ -0.73
CPNE1-218ENST00000439806 POLR1EQ9GZS1 481 aaKnown RBP10.52□□□□□ -0.73
CPNE1-218ENST00000439806 CRISPLD1Q9H336 500 aa10.52□□□□□ -0.73
CPNE1-218ENST00000439806 CCSER2Q9H7U1 834 aa10.52□□□□□ -0.73
CPNE1-218ENST00000439806 TCF7L2Q9NQB0 619 aa10.52□□□□□ -0.73
CPNE1-218ENST00000439806 STOML1Q9UBI4 398 aa10.52□□□□□ -0.73
CPNE1-218ENST00000439806 HCSTQ9UBK5 93 aa10.52□□□□□ -0.73
CPNE1-218ENST00000439806 UXTQ9UBK9 157 aaPredicted RBP10.52□□□□□ -0.73
CPNE1-218ENST00000439806 VTI1BQ9UEU0 232 aa10.52□□□□□ -0.73
CPNE1-218ENST00000439806 DNMT3LQ9UJW3 386 aa10.52□□□□□ -0.73
CPNE1-218ENST00000439806 ANGPTL2Q9UKU9 493 aa10.52□□□□□ -0.73
CPNE1-218ENST00000439806 PLA2G4CQ9UP65 541 aa10.52□□□□□ -0.73
CPNE1-218ENST00000439806 CHD5Q8TDI0 1954 aa10.52□□□□□ -0.73
CPNE1-218ENST00000439806 E9PBE3 544 aa10.51□□□□□ -0.73
CPNE1-218ENST00000439806 NEMP1O14524 444 aa10.51□□□□□ -0.73
CPNE1-218ENST00000439806 HDAC3O15379 428 aa10.51□□□□□ -0.73
CPNE1-218ENST00000439806 TBC1D4O60343 1298 aa10.51□□□□□ -0.73
CPNE1-218ENST00000439806 DLX3O60479 287 aa10.51□□□□□ -0.73
CPNE1-218ENST00000439806 NPHS1O60500 1241 aa10.51□□□□□ -0.73
CPNE1-218ENST00000439806 KLHL41O60662 606 aa10.51□□□□□ -0.73
CPNE1-218ENST00000439806 VNN2O95498 520 aa10.51□□□□□ -0.73
CPNE1-218ENST00000439806 FGF1P05230 155 aa10.51□□□□□ -0.73
CPNE1-218ENST00000439806 CHRNGP07510 517 aa10.51□□□□□ -0.73
CPNE1-218ENST00000439806 LTA4HP09960 611 aaKnown RBP10.51□□□□□ -0.73
CPNE1-218ENST00000439806 SBK3P0C264 359 aa10.51□□□□□ -0.73
CPNE1-218ENST00000439806 ZDHHC11BP0C7U3 371 aa10.51□□□□□ -0.73
CPNE1-218ENST00000439806 HLA-DPA1P20036 260 aa10.51□□□□□ -0.73
CPNE1-218ENST00000439806 ATP5F1P24539 256 aaPredicted RBP10.51□□□□□ -0.73
CPNE1-218ENST00000439806 ATP5C1P36542 298 aaKnown RBP10.51□□□□□ -0.73
CPNE1-218ENST00000439806 PBX3P40426 434 aa10.51□□□□□ -0.73
CPNE1-218ENST00000439806 LEPRP48357 1165 aaKnown RBP10.51□□□□□ -0.73
CPNE1-218ENST00000439806 SLC11A2P49281 568 aa10.51□□□□□ -0.73
CPNE1-218ENST00000439806 PRMT2P55345 433 aa10.51□□□□□ -0.73
CPNE1-218ENST00000439806 SESN3P58005 492 aa10.51□□□□□ -0.73
CPNE1-218ENST00000439806 KLF10Q13118 480 aa10.51□□□□□ -0.73
CPNE1-218ENST00000439806 CSHL1Q14406 222 aa10.51□□□□□ -0.73
CPNE1-218ENST00000439806 KHDC1Q4VXA5 237 aaKnown RBP10.51□□□□□ -0.73
CPNE1-218ENST00000439806 SLC9B1Q4ZJI4 515 aa10.51□□□□□ -0.73
CPNE1-218ENST00000439806 SIRPB2Q5JXA9 342 aa10.51□□□□□ -0.73
CPNE1-218ENST00000439806 RBM20Q5T481 1227 aaKnown RBP10.51□□□□□ -0.73
CPNE1-218ENST00000439806 HECTD2Q5U5R9 776 aa10.51□□□□□ -0.73
CPNE1-218ENST00000439806 AGAP9Q5VTM2 703 aa10.51□□□□□ -0.73
CPNE1-218ENST00000439806 C1orf146Q5VVC0 180 aa10.51□□□□□ -0.73
CPNE1-218ENST00000439806 METTL21CQ5VZV1 264 aa10.51□□□□□ -0.73
CPNE1-218ENST00000439806 TLDC1Q6P9B6 456 aa10.51□□□□□ -0.73
CPNE1-218ENST00000439806 RSPO2Q6UXX9 243 aaPredicted RBP10.51□□□□□ -0.73
CPNE1-218ENST00000439806 PTAR1Q7Z6K3 402 aaPredicted RBP10.51□□□□□ -0.73
CPNE1-218ENST00000439806 GALNT7Q86SF2 657 aa10.51□□□□□ -0.73
CPNE1-218ENST00000439806 MFSD6LQ8IWD5 586 aa10.51□□□□□ -0.73
CPNE1-218ENST00000439806 ULK2Q8IYT8 1036 aa10.51□□□□□ -0.73
CPNE1-218ENST00000439806 PGBD5Q8N414 524 aa10.51□□□□□ -0.73
CPNE1-218ENST00000439806 AFAP1L2Q8N4X5 818 aa10.51□□□□□ -0.73
CPNE1-218ENST00000439806 POU5F2Q8N7G0 328 aa10.51□□□□□ -0.73
CPNE1-218ENST00000439806 CCNYL1Q8N7R7 359 aa10.51□□□□□ -0.73
CPNE1-218ENST00000439806 FBXO22Q8NEZ5 403 aa10.51□□□□□ -0.73
CPNE1-218ENST00000439806 OR6P1Q8NGX9 317 aa10.51□□□□□ -0.73
CPNE1-218ENST00000439806 FBXO27Q8NI29 283 aa10.51□□□□□ -0.73
CPNE1-218ENST00000439806 ARRDC2Q8TBH0 407 aa10.51□□□□□ -0.73
CPNE1-218ENST00000439806 PDCD6IPQ8WUM4 868 aaKnown RBP10.51□□□□□ -0.73
CPNE1-218ENST00000439806 HEXDCQ8WVB3 486 aa10.51□□□□□ -0.73
CPNE1-218ENST00000439806 WDR60Q8WVS4 1066 aa10.51□□□□□ -0.73
CPNE1-218ENST00000439806 OVCA2Q8WZ82 227 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms