RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 DLG2Q15700 870 aa16.92■□□□□ 0.3
TSPAN3-201ENST00000267970 GALNTL5Q7Z4T8 443 aa16.92■□□□□ 0.3
TSPAN3-201ENST00000267970 PHF10Q8WUB8 498 aaKnown RBP16.92■□□□□ 0.3
TSPAN3-201ENST00000267970 CEP295NLQ96MC4 621 aa16.92■□□□□ 0.3
TSPAN3-201ENST00000267970 KCNQ5Q9NR82 932 aa16.92■□□□□ 0.3
TSPAN3-201ENST00000267970 PRR5-ARHGAP8B1AHC4 643 aa16.92■□□□□ 0.3
TSPAN3-201ENST00000267970 GOT1P17174 413 aa16.92■□□□□ 0.3
TSPAN3-201ENST00000267970 ARHGAP8P85298 464 aa16.92■□□□□ 0.3
TSPAN3-201ENST00000267970 GRSF1Q12849 480 aaKnown RBP eCLIP16.92■□□□□ 0.3
TSPAN3-201ENST00000267970 DGKZQ13574 1117 aa16.92■□□□□ 0.3
TSPAN3-201ENST00000267970 NTRK3Q16288 839 aa16.92■□□□□ 0.3
TSPAN3-201ENST00000267970 XKR6Q5GH73 641 aa16.92■□□□□ 0.3
TSPAN3-201ENST00000267970 WSCD1Q658N2 575 aa16.92■□□□□ 0.3
TSPAN3-201ENST00000267970 DCBLD1Q8N8Z6 715 aa16.92■□□□□ 0.3
TSPAN3-201ENST00000267970 C12orf29Q8N999 325 aa16.92■□□□□ 0.3
TSPAN3-201ENST00000267970 GSDMCQ9BYG8 508 aa16.92■□□□□ 0.3
TSPAN3-201ENST00000267970 SH3D21A4FU49 640 aa16.92■□□□□ 0.3
TSPAN3-201ENST00000267970 ALDH4A1P30038 563 aa16.92■□□□□ 0.3
TSPAN3-201ENST00000267970 PPP2R2BQ00005 443 aa16.92■□□□□ 0.3
TSPAN3-201ENST00000267970 SEC23AQ15436 765 aa16.92■□□□□ 0.3
TSPAN3-201ENST00000267970 PREPLQ4J6C6 727 aaPredicted RBP16.92■□□□□ 0.3
TSPAN3-201ENST00000267970 OR4A15Q8NGL6 344 aa16.92■□□□□ 0.3
TSPAN3-201ENST00000267970 TRNT1Q96Q11 434 aaKnown RBP16.92■□□□□ 0.3
TSPAN3-201ENST00000267970 GORASP1Q9BQQ3 440 aa16.92■□□□□ 0.3
TSPAN3-201ENST00000267970 IKZF4Q9H2S9 585 aa16.92■□□□□ 0.3
TSPAN3-201ENST00000267970 ZNF304Q9HCX3 659 aa16.92■□□□□ 0.3
TSPAN3-201ENST00000267970 RBM7Q9Y580 266 aaKnown RBP16.92■□□□□ 0.3
TSPAN3-201ENST00000267970 RTN3O95197 1032 aaPredicted RBP16.91■□□□□ 0.3
TSPAN3-201ENST00000267970 RLN1P04808 185 aa16.91■□□□□ 0.3
TSPAN3-201ENST00000267970 NCK1P16333 377 aa16.91■□□□□ 0.3
TSPAN3-201ENST00000267970 HIRAP54198 1017 aaPredicted RBP16.91■□□□□ 0.3
TSPAN3-201ENST00000267970 ST3GAL1Q11201 340 aa16.91■□□□□ 0.3
TSPAN3-201ENST00000267970 ZNF268Q14587 947 aaPredicted RBP16.91■□□□□ 0.3
TSPAN3-201ENST00000267970 KYAT3Q6YP21 454 aaKnown RBP16.91■□□□□ 0.3
TSPAN3-201ENST00000267970 FAM220AQ7Z4H9 259 aa16.91■□□□□ 0.3
TSPAN3-201ENST00000267970 PSTKQ8IV42 348 aaKnown RBP16.91■□□□□ 0.3
TSPAN3-201ENST00000267970 C4orf19Q8IY42 314 aa16.91■□□□□ 0.3
TSPAN3-201ENST00000267970 LRRC17Q8N6Y2 441 aa16.91■□□□□ 0.3
TSPAN3-201ENST00000267970 PHF12Q96QT6 1004 aa16.91■□□□□ 0.3
TSPAN3-201ENST00000267970 RTFDC1Q9BY42 306 aaPredicted RBP16.91■□□□□ 0.3
TSPAN3-201ENST00000267970 IQCF5A8MTL0 148 aa16.91■□□□□ 0.3
TSPAN3-201ENST00000267970 PSMD9O00233 223 aa16.91■□□□□ 0.3
TSPAN3-201ENST00000267970 ACSL4O60488 711 aa16.91■□□□□ 0.3
TSPAN3-201ENST00000267970 RPN2P04844 631 aa16.91■□□□□ 0.3
TSPAN3-201ENST00000267970 CLUP10909 449 aa16.91■□□□□ 0.3
TSPAN3-201ENST00000267970 DRD4P21917 467 aa16.91■□□□□ 0.3
TSPAN3-201ENST00000267970 CROCCP3Q8IVE0 287 aa16.91■□□□□ 0.3
TSPAN3-201ENST00000267970 OR52L1Q8NGH7 329 aa16.91■□□□□ 0.3
TSPAN3-201ENST00000267970 LPPQ93052 612 aa16.91■□□□□ 0.3
TSPAN3-201ENST00000267970 SLC35C1Q96A29 364 aa16.91■□□□□ 0.3
TSPAN3-201ENST00000267970 STARD7Q9NQZ5 370 aa16.91■□□□□ 0.3
TSPAN3-201ENST00000267970 IGSF6O95976 241 aa16.91■□□□□ 0.3
TSPAN3-201ENST00000267970 GLRA2P23416 452 aa16.91■□□□□ 0.3
TSPAN3-201ENST00000267970 IFNGR2P38484 337 aa16.91■□□□□ 0.3
TSPAN3-201ENST00000267970 TNK2Q07912 1038 aa16.91■□□□□ 0.3
TSPAN3-201ENST00000267970 PTCHD4Q6ZW05 846 aa16.91■□□□□ 0.3
TSPAN3-201ENST00000267970 PEG10Q86TG7 708 aaKnown RBP16.91■□□□□ 0.3
TSPAN3-201ENST00000267970 FAM192AQ9GZU8 254 aa16.91■□□□□ 0.3
TSPAN3-201ENST00000267970 TRPM1Q7Z4N2 1603 aa16.91■□□□□ 0.3
TSPAN3-201ENST00000267970 CEP170Q5SW79 1584 aa16.91■□□□□ 0.3
TSPAN3-201ENST00000267970 FAM149AA5PLN7 773 aa16.91■□□□□ 0.3
TSPAN3-201ENST00000267970 LOC110117498-PIK3R3F6TDL0 507 aa16.91■□□□□ 0.3
TSPAN3-201ENST00000267970 NCAM2O15394 837 aa16.91■□□□□ 0.3
TSPAN3-201ENST00000267970 LIASO43766 372 aa16.91■□□□□ 0.3
TSPAN3-201ENST00000267970 NADKO95544 446 aaPredicted RBP16.91■□□□□ 0.3
TSPAN3-201ENST00000267970 SLURP2P0DP57 97 aa16.91■□□□□ 0.3
TSPAN3-201ENST00000267970 PAGE2BQ5JRK9 111 aa16.91■□□□□ 0.3
TSPAN3-201ENST00000267970 PRAMEF19Q5SWL8 479 aa16.91■□□□□ 0.3
TSPAN3-201ENST00000267970 OTOP1Q7RTM1 612 aa16.91■□□□□ 0.3
TSPAN3-201ENST00000267970 FAM81AQ8TBF8 368 aa16.91■□□□□ 0.3
TSPAN3-201ENST00000267970 COPS5Q92905 334 aa16.91■□□□□ 0.3
TSPAN3-201ENST00000267970 MTA2O94776 668 aa16.91■□□□□ 0.3
TSPAN3-201ENST00000267970 NTSP30990 170 aa16.91■□□□□ 0.3
TSPAN3-201ENST00000267970 NR2C2P49116 596 aa16.91■□□□□ 0.3
TSPAN3-201ENST00000267970 SQLEQ14534 574 aa16.91■□□□□ 0.3
TSPAN3-201ENST00000267970 ZNF549Q6P9A3 640 aa16.91■□□□□ 0.3
TSPAN3-201ENST00000267970 CYP3A43Q9HB55 503 aa16.91■□□□□ 0.3
TSPAN3-201ENST00000267970 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.91■□□□□ 0.3
TSPAN3-201ENST00000267970 G3V2T6 193 aa16.9■□□□□ 0.3
TSPAN3-201ENST00000267970 ICAM3P32942 547 aa16.9■□□□□ 0.3
TSPAN3-201ENST00000267970 ARHGEF5Q12774 1597 aa16.9■□□□□ 0.3
TSPAN3-201ENST00000267970 VWA5B1Q5TIE3 1220 aa16.9■□□□□ 0.3
TSPAN3-201ENST00000267970 RBM43Q6ZSC3 357 aaKnown RBP16.9■□□□□ 0.3
TSPAN3-201ENST00000267970 CCDC80Q76M96 950 aa16.9■□□□□ 0.3
TSPAN3-201ENST00000267970 NT5DC4Q86YG4 428 aa16.9■□□□□ 0.3
TSPAN3-201ENST00000267970 SLC34A3Q8N130 599 aa16.9■□□□□ 0.3
TSPAN3-201ENST00000267970 NDRG1Q92597 394 aaKnown RBP16.9■□□□□ 0.3
TSPAN3-201ENST00000267970 DNAJC1Q96KC8 554 aaKnown RBP16.9■□□□□ 0.3
TSPAN3-201ENST00000267970 GFM1Q96RP9 751 aaKnown RBP16.9■□□□□ 0.3
TSPAN3-201ENST00000267970 PDCD2LQ9BRP1 358 aa16.9■□□□□ 0.3
TSPAN3-201ENST00000267970 SALL1Q9NSC2 1324 aa16.9■□□□□ 0.3
TSPAN3-201ENST00000267970 GAS2O43903 313 aaKnown RBP16.9■□□□□ 0.3
TSPAN3-201ENST00000267970 PTPN3P26045 913 aa16.9■□□□□ 0.3
TSPAN3-201ENST00000267970 IL18Q14116 193 aa16.9■□□□□ 0.3
TSPAN3-201ENST00000267970 NEK7Q8TDX7 302 aa16.9■□□□□ 0.3
TSPAN3-201ENST00000267970 MYLPFQ96A32 169 aa16.9■□□□□ 0.3
TSPAN3-201ENST00000267970 CERS2Q96G23 380 aa16.9■□□□□ 0.3
TSPAN3-201ENST00000267970 NLNQ9BYT8 704 aa16.9■□□□□ 0.3
TSPAN3-201ENST00000267970 EXO5Q9H790 373 aa16.9■□□□□ 0.3
TSPAN3-201ENST00000267970 SCAMP1O15126 338 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms