RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 ADAM22Q9P0K1 906 aa12.08□□□□□ -0.48
GABPB1-206ENST00000543881 DNAI1Q9UI46 699 aa12.08□□□□□ -0.48
GABPB1-206ENST00000543881 SATB2Q9UPW6 733 aa12.08□□□□□ -0.48
GABPB1-206ENST00000543881 FCF1Q9Y324 198 aaKnown RBP12.08□□□□□ -0.48
GABPB1-206ENST00000543881 CHD5Q8TDI0 1954 aa12.07□□□□□ -0.48
GABPB1-206ENST00000543881 LY6G6EA0A0G2JKS1 128 aa12.07□□□□□ -0.48
GABPB1-206ENST00000543881 TCRBV5S1A1TA0A578 114 aa12.07□□□□□ -0.48
GABPB1-206ENST00000543881 LRIG2O94898 1065 aa12.07□□□□□ -0.48
GABPB1-206ENST00000543881 KRT3P12035 628 aa12.07□□□□□ -0.48
GABPB1-206ENST00000543881 RHOQP17081 205 aa12.07□□□□□ -0.48
GABPB1-206ENST00000543881 GKP32189 559 aa12.07□□□□□ -0.48
GABPB1-206ENST00000543881 NSFP46459 744 aaKnown RBP12.07□□□□□ -0.48
GABPB1-206ENST00000543881 CCNHP51946 323 aaPredicted RBP12.07□□□□□ -0.48
GABPB1-206ENST00000543881 UBXN1Q04323 297 aa12.07□□□□□ -0.48
GABPB1-206ENST00000543881 SLC20A2Q08357 652 aa12.07□□□□□ -0.48
GABPB1-206ENST00000543881 STX1AQ16623 288 aa12.07□□□□□ -0.48
GABPB1-206ENST00000543881 ISXQ2M1V0 245 aa12.07□□□□□ -0.48
GABPB1-206ENST00000543881 CARD16Q5EG05 197 aa12.07□□□□□ -0.48
GABPB1-206ENST00000543881 RWDD4Q6NW29 188 aaKnown RBP12.07□□□□□ -0.48
GABPB1-206ENST00000543881 NEK5Q6P3R8 708 aa12.07□□□□□ -0.48
GABPB1-206ENST00000543881 WDR59Q6PJI9 974 aa12.07□□□□□ -0.48
GABPB1-206ENST00000543881 IGF2-ASQ6U949 168 aa12.07□□□□□ -0.48
GABPB1-206ENST00000543881 PRICKLE2Q7Z3G6 844 aa12.07□□□□□ -0.48
GABPB1-206ENST00000543881 PCDH20Q8N6Y1 951 aaKnown RBP12.07□□□□□ -0.48
GABPB1-206ENST00000543881 NEK11Q8NG66 645 aa12.07□□□□□ -0.48
GABPB1-206ENST00000543881 MAPK15Q8TD08 544 aa12.07□□□□□ -0.48
GABPB1-206ENST00000543881 PCMTD1Q96MG8 357 aaPredicted RBP12.07□□□□□ -0.48
GABPB1-206ENST00000543881 GBP4Q96PP9 640 aa12.07□□□□□ -0.48
GABPB1-206ENST00000543881 ERGIC2Q96RQ1 377 aa12.07□□□□□ -0.48
GABPB1-206ENST00000543881 CALN1Q9BXU9 219 aa12.07□□□□□ -0.48
GABPB1-206ENST00000543881 CEP44Q9C0F1 390 aa12.07□□□□□ -0.48
GABPB1-206ENST00000543881 TMEM248Q9NWD8 314 aa12.07□□□□□ -0.48
GABPB1-206ENST00000543881 DAAM1Q9Y4D1 1078 aa12.07□□□□□ -0.48
GABPB1-206ENST00000543881 U3KQA8 63 aa12.07□□□□□ -0.48
GABPB1-206ENST00000543881 SPTA1P02549 2419 aa12.06□□□□□ -0.48
GABPB1-206ENST00000543881 NEMP2A6NFY4 417 aa12.06□□□□□ -0.48
GABPB1-206ENST00000543881 LZTS3O60299 673 aaPredicted RBP12.06□□□□□ -0.48
GABPB1-206ENST00000543881 PLEKP08567 350 aaPredicted RBP12.06□□□□□ -0.48
GABPB1-206ENST00000543881 ATP1A3P13637 1013 aa12.06□□□□□ -0.48
GABPB1-206ENST00000543881 RBMS1P29558 406 aaKnown RBP12.06□□□□□ -0.48
GABPB1-206ENST00000543881 RECQLP46063 649 aaPredicted RBP12.06□□□□□ -0.48
GABPB1-206ENST00000543881 CSRP3P50461 194 aa12.06□□□□□ -0.48
GABPB1-206ENST00000543881 DUSP3P51452 185 aaPredicted RBP12.06□□□□□ -0.48
GABPB1-206ENST00000543881 DNA2P51530 1060 aa12.06□□□□□ -0.48
GABPB1-206ENST00000543881 CLDN2P57739 230 aa12.06□□□□□ -0.48
GABPB1-206ENST00000543881 FGL2Q14314 439 aa12.06□□□□□ -0.48
GABPB1-206ENST00000543881 ARL13BQ3SXY8 428 aa12.06□□□□□ -0.48
GABPB1-206ENST00000543881 TMEM259Q4ZIN3 620 aa12.06□□□□□ -0.48
GABPB1-206ENST00000543881 LEKR1Q6ZMV7 388 aa12.06□□□□□ -0.48
GABPB1-206ENST00000543881 GCNT7Q6ZNI0 430 aa12.06□□□□□ -0.48
GABPB1-206ENST00000543881 MON1BQ7L1V2 547 aa12.06□□□□□ -0.48
GABPB1-206ENST00000543881 PYROXD2Q8N2H3 581 aa12.06□□□□□ -0.48
GABPB1-206ENST00000543881 C3orf20Q8ND61 904 aa12.06□□□□□ -0.48
GABPB1-206ENST00000543881 OR13H1Q8NG92 308 aa12.06□□□□□ -0.48
GABPB1-206ENST00000543881 OR6K2Q8NGY2 324 aa12.06□□□□□ -0.48
GABPB1-206ENST00000543881 IFI44Q8TCB0 444 aa12.06□□□□□ -0.48
GABPB1-206ENST00000543881 CCDC97Q96F63 343 aaPredicted RBP12.06□□□□□ -0.48
GABPB1-206ENST00000543881 SLC46A1Q96NT5 459 aa12.06□□□□□ -0.48
GABPB1-206ENST00000543881 AGPAT1Q99943 283 aa12.06□□□□□ -0.48
GABPB1-206ENST00000543881 HEPHQ9BQS7 1158 aa12.06□□□□□ -0.48
GABPB1-206ENST00000543881 TM6SF2Q9BZW4 377 aa12.06□□□□□ -0.48
GABPB1-206ENST00000543881 NOL6Q9H6R4 1146 aaKnown RBP12.06□□□□□ -0.48
GABPB1-206ENST00000543881 USP29Q9HBJ7 922 aa12.06□□□□□ -0.48
GABPB1-206ENST00000543881 DYRK4Q9NR20 520 aa12.06□□□□□ -0.48
GABPB1-206ENST00000543881 EVA1BQ9NVM1 165 aa12.06□□□□□ -0.48
GABPB1-206ENST00000543881 A0A1W2PNU3 283 aaPredicted RBP12.05□□□□□ -0.48
GABPB1-206ENST00000543881 SIGLEC16A6NMB1 481 aa12.05□□□□□ -0.48
GABPB1-206ENST00000543881 K7ESM1 405 aa12.05□□□□□ -0.48
GABPB1-206ENST00000543881 SCAMP1O15126 338 aa12.05□□□□□ -0.48
GABPB1-206ENST00000543881 CCP110O43303 1012 aa12.05□□□□□ -0.48
GABPB1-206ENST00000543881 PCDH8O95206 1070 aa12.05□□□□□ -0.48
GABPB1-206ENST00000543881 ADRB3P13945 408 aa12.05□□□□□ -0.48
GABPB1-206ENST00000543881 GPD1P21695 349 aa12.05□□□□□ -0.48
GABPB1-206ENST00000543881 TGM2P21980 687 aa12.05□□□□□ -0.48
GABPB1-206ENST00000543881 HNRNPA2B1P22626 353 aaKnown RBP12.05□□□□□ -0.48
GABPB1-206ENST00000543881 ITGB7P26010 798 aa12.05□□□□□ -0.48
GABPB1-206ENST00000543881 L1CAMP32004 1257 aa12.05□□□□□ -0.48
GABPB1-206ENST00000543881 MAPKAPK2P49137 400 aa12.05□□□□□ -0.48
GABPB1-206ENST00000543881 NEK3P51956 506 aa12.05□□□□□ -0.48
GABPB1-206ENST00000543881 RPL7AP62424 266 aaKnown RBP12.05□□□□□ -0.48
GABPB1-206ENST00000543881 SKOR1P84550 965 aa12.05□□□□□ -0.48
GABPB1-206ENST00000543881 CCDC15Q0P6D6 951 aa12.05□□□□□ -0.48
GABPB1-206ENST00000543881 ZNF542PQ5EBM4 170 aa12.05□□□□□ -0.48
GABPB1-206ENST00000543881 PPP1R15BQ5SWA1 713 aa12.05□□□□□ -0.48
GABPB1-206ENST00000543881 CCDC81Q6ZN84 652 aa12.05□□□□□ -0.48
GABPB1-206ENST00000543881 PARS2Q7L3T8 475 aaKnown RBP12.05□□□□□ -0.48
GABPB1-206ENST00000543881 COL27A1Q8IZC6 1860 aaPredicted RBP12.05□□□□□ -0.48
GABPB1-206ENST00000543881 SLC22A18ASQ8N1D0 253 aa12.05□□□□□ -0.48
GABPB1-206ENST00000543881 NTAN1Q96AB6 310 aa12.05□□□□□ -0.48
GABPB1-206ENST00000543881 ISG20Q96AZ6 181 aaKnown RBP12.05□□□□□ -0.48
GABPB1-206ENST00000543881 TBC1D31Q96DN5 1066 aa12.05□□□□□ -0.48
GABPB1-206ENST00000543881 ATXN7L3BQ96GX2 97 aa12.05□□□□□ -0.48
GABPB1-206ENST00000543881 PPP1R16AQ96I34 528 aa12.05□□□□□ -0.48
GABPB1-206ENST00000543881 DUSP23Q9BVJ7 150 aa12.05□□□□□ -0.48
GABPB1-206ENST00000543881 SELENOOQ9BVL4 669 aa12.05□□□□□ -0.48
GABPB1-206ENST00000543881 FADS3Q9Y5Q0 445 aa12.05□□□□□ -0.48
GABPB1-206ENST00000543881 PIEZO2Q9H5I5 2752 aa12.05□□□□□ -0.48
GABPB1-206ENST00000543881 RAD51BO15315 384 aa12.04□□□□□ -0.48
GABPB1-206ENST00000543881 TEX33O43247 280 aa12.04□□□□□ -0.48
GABPB1-206ENST00000543881 NEBLO76041 1014 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms