RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 I6L893 689 aaPredicted RBP18.31■□□□□ 0.52
CHCHD3-203ENST00000448878 PLD2O14939 933 aa18.31■□□□□ 0.52
CHCHD3-203ENST00000448878 EFSO43281 561 aa18.31■□□□□ 0.52
CHCHD3-203ENST00000448878 CTSEP14091 401 aa18.31■□□□□ 0.52
CHCHD3-203ENST00000448878 TSHRP16473 764 aa18.31■□□□□ 0.52
CHCHD3-203ENST00000448878 ABL2P42684 1182 aa18.31■□□□□ 0.52
CHCHD3-203ENST00000448878 ARF5P84085 180 aa18.31■□□□□ 0.52
CHCHD3-203ENST00000448878 NFKB2Q00653 900 aa18.31■□□□□ 0.52
CHCHD3-203ENST00000448878 GNA12Q03113 381 aa18.31■□□□□ 0.52
CHCHD3-203ENST00000448878 PPARDQ03181 441 aa18.31■□□□□ 0.52
CHCHD3-203ENST00000448878 TGIF1Q15583 401 aa18.31■□□□□ 0.52
CHCHD3-203ENST00000448878 OTUD1Q5VV17 481 aaPredicted RBP18.31■□□□□ 0.52
CHCHD3-203ENST00000448878 SCG3Q8WXD2 468 aaKnown RBP18.31■□□□□ 0.52
CHCHD3-203ENST00000448878 EXTL1Q92935 676 aa18.31■□□□□ 0.52
CHCHD3-203ENST00000448878 RAB7BQ96AH8 199 aa18.31■□□□□ 0.52
CHCHD3-203ENST00000448878 TIGD1Q96MW7 591 aa18.31■□□□□ 0.52
CHCHD3-203ENST00000448878 GFM1Q96RP9 751 aaKnown RBP18.31■□□□□ 0.52
CHCHD3-203ENST00000448878 LRRC61Q9BV99 259 aa18.31■□□□□ 0.52
CHCHD3-203ENST00000448878 FOXP3Q9BZS1 431 aa18.31■□□□□ 0.52
CHCHD3-203ENST00000448878 ZYG11BQ9C0D3 744 aa18.31■□□□□ 0.52
CHCHD3-203ENST00000448878 STRADBQ9C0K7 418 aa18.31■□□□□ 0.52
CHCHD3-203ENST00000448878 ATXN7L1Q9ULK2 861 aaPredicted RBP18.31■□□□□ 0.52
CHCHD3-203ENST00000448878 MYO18BQ8IUG5 2567 aa18.3■□□□□ 0.52
CHCHD3-203ENST00000448878 ZMPSTE24O75844 475 aa18.3■□□□□ 0.52
CHCHD3-203ENST00000448878 FGFR1OPO95684 399 aaKnown RBP18.3■□□□□ 0.52
CHCHD3-203ENST00000448878 UGT2B4P06133 528 aa18.3■□□□□ 0.52
CHCHD3-203ENST00000448878 JMJD7P0C870 316 aa18.3■□□□□ 0.52
CHCHD3-203ENST00000448878 HGFP14210 728 aa18.3■□□□□ 0.52
CHCHD3-203ENST00000448878 EIF4A3P38919 411 aaKnown RBP18.3■□□□□ 0.52
CHCHD3-203ENST00000448878 PAK1Q13153 545 aa18.3■□□□□ 0.52
CHCHD3-203ENST00000448878 POLD3Q15054 466 aaPredicted RBP18.3■□□□□ 0.52
CHCHD3-203ENST00000448878 ZNF805Q5CZA5 627 aa18.3■□□□□ 0.52
CHCHD3-203ENST00000448878 LRRC73Q5JTD7 316 aa18.3■□□□□ 0.52
CHCHD3-203ENST00000448878 FAM102AQ5T9C2 384 aaPredicted RBP18.3■□□□□ 0.52
CHCHD3-203ENST00000448878 ZNF783Q6ZMS7 281 aa18.3■□□□□ 0.52
CHCHD3-203ENST00000448878 RD3Q7Z3Z2 195 aa18.3■□□□□ 0.52
CHCHD3-203ENST00000448878 TTC7BQ86TV6 843 aa18.3■□□□□ 0.52
CHCHD3-203ENST00000448878 ZDHHC17Q8IUH5 632 aa18.3■□□□□ 0.52
CHCHD3-203ENST00000448878 DENND6BQ8NEG7 585 aa18.3■□□□□ 0.52
CHCHD3-203ENST00000448878 ZNF397Q8NF99 534 aaPredicted RBP18.3■□□□□ 0.52
CHCHD3-203ENST00000448878 SGF29Q96ES7 293 aa18.3■□□□□ 0.52
CHCHD3-203ENST00000448878 KLHL32Q96NJ5 620 aa18.3■□□□□ 0.52
CHCHD3-203ENST00000448878 CLPBQ9H078 707 aa18.3■□□□□ 0.52
CHCHD3-203ENST00000448878 APEX2Q9UBZ4 518 aa18.3■□□□□ 0.52
CHCHD3-203ENST00000448878 COL27A1Q8IZC6 1860 aaPredicted RBP18.3■□□□□ 0.52
CHCHD3-203ENST00000448878 MMP20O60882 483 aa18.29■□□□□ 0.52
CHCHD3-203ENST00000448878 TM7SF2O76062 418 aa18.29■□□□□ 0.52
CHCHD3-203ENST00000448878 CELA2BP08218 269 aaPredicted RBP18.29■□□□□ 0.52
CHCHD3-203ENST00000448878 UGT1A5P35504 534 aa18.29■□□□□ 0.52
CHCHD3-203ENST00000448878 IGFALSP35858 605 aa18.29■□□□□ 0.52
CHCHD3-203ENST00000448878 PDX1P52945 283 aa18.29■□□□□ 0.52
CHCHD3-203ENST00000448878 INHBCP55103 352 aa18.29■□□□□ 0.52
CHCHD3-203ENST00000448878 MARSP56192 900 aaKnown RBP18.29■□□□□ 0.52
CHCHD3-203ENST00000448878 CCL7P80098 99 aa18.29■□□□□ 0.52
CHCHD3-203ENST00000448878 SRSF6Q13247 344 aaKnown RBP18.29■□□□□ 0.52
CHCHD3-203ENST00000448878 LINC00303Q3SY05 128 aa18.29■□□□□ 0.52
CHCHD3-203ENST00000448878 SLC25A52Q3SY17 297 aa18.29■□□□□ 0.52
CHCHD3-203ENST00000448878 ACBD5Q5T8D3 534 aaPredicted RBP18.29■□□□□ 0.52
CHCHD3-203ENST00000448878 LEKR1Q6ZMV7 388 aa18.29■□□□□ 0.52
CHCHD3-203ENST00000448878 GBP6Q6ZN66 633 aa18.29■□□□□ 0.52
CHCHD3-203ENST00000448878 B3GNT8Q7Z7M8 397 aa18.29■□□□□ 0.52
CHCHD3-203ENST00000448878 HID1Q8IV36 788 aa18.29■□□□□ 0.52
CHCHD3-203ENST00000448878 SDR16C5Q8N3Y7 309 aa18.29■□□□□ 0.52
CHCHD3-203ENST00000448878 CXorf40AQ8TE69 158 aa18.29■□□□□ 0.52
CHCHD3-203ENST00000448878 ASB12Q8WXK4 309 aa18.29■□□□□ 0.52
CHCHD3-203ENST00000448878 CCDC74AQ96AQ1 378 aa18.29■□□□□ 0.52
CHCHD3-203ENST00000448878 CENPTQ96BT3 561 aa18.29■□□□□ 0.52
CHCHD3-203ENST00000448878 ARHGEF26Q96DR7 871 aa18.29■□□□□ 0.52
CHCHD3-203ENST00000448878 LIN37Q96GY3 246 aaPredicted RBP18.29■□□□□ 0.52
CHCHD3-203ENST00000448878 C1QTNF7Q9BXJ2 289 aa18.29■□□□□ 0.52
CHCHD3-203ENST00000448878 CPEB1Q9BZB8 566 aaKnown RBP18.29■□□□□ 0.52
CHCHD3-203ENST00000448878 PISDQ9UG56 409 aa18.29■□□□□ 0.52
CHCHD3-203ENST00000448878 PNMA8BQ9ULN7 279 aaPredicted RBP18.29■□□□□ 0.52
CHCHD3-203ENST00000448878 HPCAL4Q9UM19 191 aa18.29■□□□□ 0.52
CHCHD3-203ENST00000448878 KIF26BQ2KJY2 2108 aa18.28■□□□□ 0.52
CHCHD3-203ENST00000448878 IGLV3-10A0A075B6K4 115 aa18.28■□□□□ 0.52
CHCHD3-203ENST00000448878 RPLP0P05388 317 aaKnown RBP18.28■□□□□ 0.52
CHCHD3-203ENST00000448878 BMP6P22004 513 aa18.28■□□□□ 0.52
CHCHD3-203ENST00000448878 ACVRL1P37023 503 aa18.28■□□□□ 0.52
CHCHD3-203ENST00000448878 BLKP51451 505 aa18.28■□□□□ 0.52
CHCHD3-203ENST00000448878 SNRPD1P62314 119 aaKnown RBP18.28■□□□□ 0.52
CHCHD3-203ENST00000448878 YPEL5P62699 121 aa18.28■□□□□ 0.52
CHCHD3-203ENST00000448878 EIF3IQ13347 325 aaKnown RBP18.28■□□□□ 0.52
CHCHD3-203ENST00000448878 ELOCQ15369 112 aa18.28■□□□□ 0.52
CHCHD3-203ENST00000448878 EXOC3L4Q17RC7 722 aa18.28■□□□□ 0.52
CHCHD3-203ENST00000448878 RWDD4Q6NW29 188 aaKnown RBP18.28■□□□□ 0.52
CHCHD3-203ENST00000448878 ATG14Q6ZNE5 492 aa18.28■□□□□ 0.52
CHCHD3-203ENST00000448878 SLC47A2Q86VL8 602 aa18.28■□□□□ 0.52
CHCHD3-203ENST00000448878 FAM131BQ86XD5 332 aa18.28■□□□□ 0.52
CHCHD3-203ENST00000448878 ZNF354CQ86Y25 554 aa18.28■□□□□ 0.52
CHCHD3-203ENST00000448878 SHC3Q92529 594 aa18.28■□□□□ 0.52
CHCHD3-203ENST00000448878 PGAP3Q96FM1 320 aaPredicted RBP18.28■□□□□ 0.52
CHCHD3-203ENST00000448878 MBNL1Q9NR56 388 aaKnown RBP18.28■□□□□ 0.52
CHCHD3-203ENST00000448878 SEPT10Q9P0V9 454 aa18.28■□□□□ 0.52
CHCHD3-203ENST00000448878 GOLGA8SH3BPF8 625 aa18.27■□□□□ 0.52
CHCHD3-203ENST00000448878 TMX2-CTNND1H3BSU7 103 aa18.27■□□□□ 0.52
CHCHD3-203ENST00000448878 NTN3O00634 580 aaPredicted RBP18.27■□□□□ 0.52
CHCHD3-203ENST00000448878 POP4O95707 220 aaKnown RBP18.27■□□□□ 0.52
CHCHD3-203ENST00000448878 ALPIP09923 528 aa18.27■□□□□ 0.52
CHCHD3-203ENST00000448878 PNMA6AP0CW24 399 aaPredicted RBP18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms