RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 ZYG11BQ9C0D3 744 aa12.1□□□□□ -0.47
GABPB1-206ENST00000543881 HSD3B7Q9H2F3 369 aa12.1□□□□□ -0.47
GABPB1-206ENST00000543881 ASCL3Q9NQ33 180 aa12.1□□□□□ -0.47
GABPB1-206ENST00000543881 THSD1Q9NS62 852 aa12.1□□□□□ -0.47
GABPB1-206ENST00000543881 NDFIP2Q9NV92 336 aa12.1□□□□□ -0.47
GABPB1-206ENST00000543881 TMEM51Q9NW97 253 aa12.1□□□□□ -0.47
GABPB1-206ENST00000543881 NEU3Q9UQ49 428 aa12.1□□□□□ -0.47
GABPB1-206ENST00000543881 C2CD4BA6NLJ0 364 aa12.09□□□□□ -0.47
GABPB1-206ENST00000543881 FAM72CH0Y354 149 aa12.09□□□□□ -0.47
GABPB1-206ENST00000543881 KPNA3O00505 521 aaPredicted RBP12.09□□□□□ -0.47
GABPB1-206ENST00000543881 SLC28A2O43868 658 aa12.09□□□□□ -0.47
GABPB1-206ENST00000543881 RNGTTO60942 597 aaKnown RBP12.09□□□□□ -0.47
GABPB1-206ENST00000543881 CD160O95971 181 aa12.09□□□□□ -0.47
GABPB1-206ENST00000543881 ADRA1BP35368 520 aa12.09□□□□□ -0.47
GABPB1-206ENST00000543881 ANP32AP39687 249 aaKnown RBP12.09□□□□□ -0.47
GABPB1-206ENST00000543881 CLCN6P51797 869 aa12.09□□□□□ -0.47
GABPB1-206ENST00000543881 GNA12Q03113 381 aa12.09□□□□□ -0.47
GABPB1-206ENST00000543881 SETMARQ53H47 684 aaPredicted RBP12.09□□□□□ -0.47
GABPB1-206ENST00000543881 ARSIQ5FYB1 569 aa12.09□□□□□ -0.47
GABPB1-206ENST00000543881 FKBP15Q5T1M5 1219 aa12.09□□□□□ -0.47
GABPB1-206ENST00000543881 FAM72AQ5TYM5 149 aa12.09□□□□□ -0.47
GABPB1-206ENST00000543881 FAM72DQ6L9T8 149 aa12.09□□□□□ -0.47
GABPB1-206ENST00000543881 ZNF783Q6ZMS7 281 aa12.09□□□□□ -0.47
GABPB1-206ENST00000543881 APTXQ7Z2E3 356 aaKnown RBP12.09□□□□□ -0.47
GABPB1-206ENST00000543881 FAM72BQ86X60 149 aa12.09□□□□□ -0.47
GABPB1-206ENST00000543881 DRC7Q8IY82 874 aa12.09□□□□□ -0.47
GABPB1-206ENST00000543881 TMIEQ8NEW7 156 aa12.09□□□□□ -0.47
GABPB1-206ENST00000543881 KLK6Q92876 244 aa12.09□□□□□ -0.47
GABPB1-206ENST00000543881 VCPIP1Q96JH7 1222 aa12.09□□□□□ -0.47
GABPB1-206ENST00000543881 ABCG4Q9H172 646 aa12.09□□□□□ -0.47
GABPB1-206ENST00000543881 OSBPL2Q9H1P3 480 aa12.09□□□□□ -0.47
GABPB1-206ENST00000543881 CAAP1Q9H8G2 361 aa12.09□□□□□ -0.47
GABPB1-206ENST00000543881 PREBQ9HCU5 417 aa12.09□□□□□ -0.47
GABPB1-206ENST00000543881 PPARGC1AQ9UBK2 798 aaKnown RBP12.09□□□□□ -0.47
GABPB1-206ENST00000543881 OR12D3Q9UGF7 316 aa12.09□□□□□ -0.47
GABPB1-206ENST00000543881 LIMA1Q9UHB6 759 aaKnown RBP12.09□□□□□ -0.47
GABPB1-206ENST00000543881 HECTD1Q9ULT8 2610 aa12.09□□□□□ -0.47
GABPB1-206ENST00000543881 A0A1W2PQU0 124 aa12.08□□□□□ -0.47
GABPB1-206ENST00000543881 LGALS16A8MUM7 142 aa12.08□□□□□ -0.47
GABPB1-206ENST00000543881 SLC31A1O15431 190 aa12.08□□□□□ -0.47
GABPB1-206ENST00000543881 LEFTY1O75610 366 aa12.08□□□□□ -0.47
GABPB1-206ENST00000543881 GP1BAP07359 652 aa12.08□□□□□ -0.47
GABPB1-206ENST00000543881 THEGLP0DJG4 465 aa12.08□□□□□ -0.47
GABPB1-206ENST00000543881 GIMD1P0DJR0 217 aa12.08□□□□□ -0.47
GABPB1-206ENST00000543881 MYF5P13349 255 aa12.08□□□□□ -0.47
GABPB1-206ENST00000543881 KRT10P13645 584 aa12.08□□□□□ -0.47
GABPB1-206ENST00000543881 PRLRP16471 622 aa12.08□□□□□ -0.47
GABPB1-206ENST00000543881 SDC4P31431 198 aa12.08□□□□□ -0.47
GABPB1-206ENST00000543881 RFC1P35251 1148 aaPredicted RBP12.08□□□□□ -0.47
GABPB1-206ENST00000543881 ACVRL1P37023 503 aa12.08□□□□□ -0.47
GABPB1-206ENST00000543881 STAT1P42224 750 aa12.08□□□□□ -0.47
GABPB1-206ENST00000543881 SERPINH1P50454 418 aaKnown RBP12.08□□□□□ -0.47
GABPB1-206ENST00000543881 HDAC4P56524 1084 aa12.08□□□□□ -0.47
GABPB1-206ENST00000543881 NRG1Q02297 640 aaPredicted RBP12.08□□□□□ -0.47
GABPB1-206ENST00000543881 NCAPHQ15003 741 aa12.08□□□□□ -0.47
GABPB1-206ENST00000543881 ZNF284Q2VY69 593 aa12.08□□□□□ -0.47
GABPB1-206ENST00000543881 TRIM72Q6ZMU5 477 aa12.08□□□□□ -0.47
GABPB1-206ENST00000543881 NLRP14Q86W24 1093 aa12.08□□□□□ -0.47
GABPB1-206ENST00000543881 CCDC185Q8N715 623 aa12.08□□□□□ -0.47
GABPB1-206ENST00000543881 TMEM145Q8NBT3 493 aa12.08□□□□□ -0.47
GABPB1-206ENST00000543881 GRIN3AQ8TCU5 1115 aa12.08□□□□□ -0.47
GABPB1-206ENST00000543881 CENPIQ92674 756 aaPredicted RBP12.08□□□□□ -0.47
GABPB1-206ENST00000543881 VOPP1Q96AW1 172 aa12.08□□□□□ -0.47
GABPB1-206ENST00000543881 MYOCQ99972 504 aa12.08□□□□□ -0.47
GABPB1-206ENST00000543881 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.08□□□□□ -0.47
GABPB1-206ENST00000543881 ATP13A1Q9HD20 1204 aa12.08□□□□□ -0.47
GABPB1-206ENST00000543881 KLHL11Q9NVR0 708 aa12.08□□□□□ -0.47
GABPB1-206ENST00000543881 IL36AQ9UHA7 158 aa12.08□□□□□ -0.47
GABPB1-206ENST00000543881 ZFR2Q9UPR6 939 aaKnown RBP12.08□□□□□ -0.47
GABPB1-206ENST00000543881 SSUH2Q9Y2M2 353 aa12.08□□□□□ -0.47
GABPB1-206ENST00000543881 FARP1Q9Y4F1 1045 aaPredicted RBP12.08□□□□□ -0.47
GABPB1-206ENST00000543881 WASF2Q9Y6W5 498 aa12.08□□□□□ -0.47
GABPB1-206ENST00000543881 LRRC10BA6NIK2 292 aa12.08□□□□□ -0.48
GABPB1-206ENST00000543881 K7ENP7 123 aa12.08□□□□□ -0.48
GABPB1-206ENST00000543881 PIAS2O75928 621 aa12.08□□□□□ -0.48
GABPB1-206ENST00000543881 PRNPP04156 253 aa12.08□□□□□ -0.48
GABPB1-206ENST00000543881 TPM2P07951 284 aa12.08□□□□□ -0.48
GABPB1-206ENST00000543881 ALPPL2P10696 532 aa12.08□□□□□ -0.48
GABPB1-206ENST00000543881 PTPN9P43378 593 aa12.08□□□□□ -0.48
GABPB1-206ENST00000543881 GSCP56915 257 aaPredicted RBP12.08□□□□□ -0.48
GABPB1-206ENST00000543881 MYL5Q02045 173 aa12.08□□□□□ -0.48
GABPB1-206ENST00000543881 CLEC16AQ2KHT3 1053 aa12.08□□□□□ -0.48
GABPB1-206ENST00000543881 C3orf38Q5JPI3 329 aa12.08□□□□□ -0.48
GABPB1-206ENST00000543881 KIAA1614Q5VZ46 1190 aa12.08□□□□□ -0.48
GABPB1-206ENST00000543881 SEL1L3Q68CR1 1132 aa12.08□□□□□ -0.48
GABPB1-206ENST00000543881 RETSATQ6NUM9 610 aa12.08□□□□□ -0.48
GABPB1-206ENST00000543881 INO80CQ6PI98 192 aaPredicted RBP12.08□□□□□ -0.48
GABPB1-206ENST00000543881 SASS6Q6UVJ0 657 aa12.08□□□□□ -0.48
GABPB1-206ENST00000543881 ERN2Q76MJ5 926 aaKnown RBP12.08□□□□□ -0.48
GABPB1-206ENST00000543881 STRADAQ7RTN6 431 aa12.08□□□□□ -0.48
GABPB1-206ENST00000543881 HORMAD1Q86X24 394 aa12.08□□□□□ -0.48
GABPB1-206ENST00000543881 PHF13Q86YI8 300 aaPredicted RBP12.08□□□□□ -0.48
GABPB1-206ENST00000543881 FAM172AQ8WUF8 416 aa12.08□□□□□ -0.48
GABPB1-206ENST00000543881 ARHGEF2Q92974 986 aaKnown RBP12.08□□□□□ -0.48
GABPB1-206ENST00000543881 APOLD1Q96LR9 279 aa12.08□□□□□ -0.48
GABPB1-206ENST00000543881 CCDC114Q96M63 670 aa12.08□□□□□ -0.48
GABPB1-206ENST00000543881 HDAC8Q9BY41 377 aa12.08□□□□□ -0.48
GABPB1-206ENST00000543881 FZD3Q9NPG1 666 aa12.08□□□□□ -0.48
GABPB1-206ENST00000543881 ANO10Q9NW15 660 aa12.08□□□□□ -0.48
GABPB1-206ENST00000543881 NLGN3Q9NZ94 848 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms