RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 SYNDIG1Q9H7V2 258 aa16.64■□□□□ 0.25
SH3RF1-201ENST00000284637 KRCC1Q9NPI7 259 aaPredicted RBP16.64■□□□□ 0.25
SH3RF1-201ENST00000284637 POLE3Q9NRF9 147 aa16.64■□□□□ 0.25
SH3RF1-201ENST00000284637 TTLL13PA6NNM8 815 aa16.63■□□□□ 0.25
SH3RF1-201ENST00000284637 WEE1P30291 646 aa16.63■□□□□ 0.25
SH3RF1-201ENST00000284637 BNC1Q01954 994 aa16.63■□□□□ 0.25
SH3RF1-201ENST00000284637 TOP3AQ13472 1001 aaPredicted RBP16.63■□□□□ 0.25
SH3RF1-201ENST00000284637 SPESP1Q6UW49 350 aa16.63■□□□□ 0.25
SH3RF1-201ENST00000284637 C6orf89Q6UWU4 347 aa16.63■□□□□ 0.25
SH3RF1-201ENST00000284637 PHF13Q86YI8 300 aaPredicted RBP16.63■□□□□ 0.25
SH3RF1-201ENST00000284637 SLC9A9Q8IVB4 645 aa16.63■□□□□ 0.25
SH3RF1-201ENST00000284637 ADHFE1Q8IWW8 467 aa16.63■□□□□ 0.25
SH3RF1-201ENST00000284637 RP9Q8TA86 221 aaKnown RBP16.63■□□□□ 0.25
SH3RF1-201ENST00000284637 QKIQ96PU8 341 aaKnown RBP eCLIP16.63■□□□□ 0.25
SH3RF1-201ENST00000284637 EMILIN2Q9BXX0 1053 aa16.63■□□□□ 0.25
SH3RF1-201ENST00000284637 SPATA31C1P0DKV0 1188 aa16.63■□□□□ 0.25
SH3RF1-201ENST00000284637 HNRNPLP14866 589 aaKnown RBP eCLIP16.63■□□□□ 0.25
SH3RF1-201ENST00000284637 COX10Q12887 443 aa16.63■□□□□ 0.25
SH3RF1-201ENST00000284637 HGSNATQ68CP4 663 aa16.63■□□□□ 0.25
SH3RF1-201ENST00000284637 SPOCK2Q92563 424 aa16.63■□□□□ 0.25
SH3RF1-201ENST00000284637 GPATCH1Q9BRR8 931 aaKnown RBP16.63■□□□□ 0.25
SH3RF1-201ENST00000284637 TLR8Q9NR97 1041 aaKnown RBP16.63■□□□□ 0.25
SH3RF1-201ENST00000284637 SMPD4Q9NXE4 827 aa16.63■□□□□ 0.25
SH3RF1-201ENST00000284637 ATP6V1HQ9UI12 483 aa16.63■□□□□ 0.25
SH3RF1-201ENST00000284637 H7C4K7 107 aa16.63■□□□□ 0.25
SH3RF1-201ENST00000284637 DARSP14868 501 aaKnown RBP16.63■□□□□ 0.25
SH3RF1-201ENST00000284637 BDNFP23560 247 aa16.63■□□□□ 0.25
SH3RF1-201ENST00000284637 DNAJB2P25686 324 aa16.63■□□□□ 0.25
SH3RF1-201ENST00000284637 IL12AP29459 219 aa16.63■□□□□ 0.25
SH3RF1-201ENST00000284637 PPP2R1BP30154 601 aa16.63■□□□□ 0.25
SH3RF1-201ENST00000284637 HIRAP54198 1017 aaPredicted RBP16.63■□□□□ 0.25
SH3RF1-201ENST00000284637 TTC23Q5W5X9 447 aa16.63■□□□□ 0.25
SH3RF1-201ENST00000284637 SCIMPQ6UWF3 145 aa16.63■□□□□ 0.25
SH3RF1-201ENST00000284637 PCDHB18PQ96TA0 734 aa16.63■□□□□ 0.25
SH3RF1-201ENST00000284637 NMUR2Q9GZQ4 415 aa16.63■□□□□ 0.25
SH3RF1-201ENST00000284637 REEP1Q9H902 201 aa16.63■□□□□ 0.25
SH3RF1-201ENST00000284637 KLQ9UEF7 1012 aa16.63■□□□□ 0.25
SH3RF1-201ENST00000284637 SALL4Q9UJQ4 1053 aa16.63■□□□□ 0.25
SH3RF1-201ENST00000284637 EFCAB10A6NFE3 127 aa16.63■□□□□ 0.25
SH3RF1-201ENST00000284637 A8MX80 341 aa16.63■□□□□ 0.25
SH3RF1-201ENST00000284637 RGS14O43566 566 aa16.63■□□□□ 0.25
SH3RF1-201ENST00000284637 NFICP08651 508 aa16.63■□□□□ 0.25
SH3RF1-201ENST00000284637 SLURP2P0DP57 97 aa16.63■□□□□ 0.25
SH3RF1-201ENST00000284637 TFEBP19484 476 aa16.63■□□□□ 0.25
SH3RF1-201ENST00000284637 SQLEQ14534 574 aa16.63■□□□□ 0.25
SH3RF1-201ENST00000284637 ZNF280DQ6N043 979 aa16.63■□□□□ 0.25
SH3RF1-201ENST00000284637 PLEKHH3Q7Z736 793 aa16.63■□□□□ 0.25
SH3RF1-201ENST00000284637 CMC1Q7Z7K0 106 aa16.63■□□□□ 0.25
SH3RF1-201ENST00000284637 AKT1S1Q96B36 256 aa16.63■□□□□ 0.25
SH3RF1-201ENST00000284637 FAM163AQ96GL9 167 aaPredicted RBP16.63■□□□□ 0.25
SH3RF1-201ENST00000284637 TSEN34Q9BSV6 310 aaKnown RBP16.63■□□□□ 0.25
SH3RF1-201ENST00000284637 CDH9Q9ULB4 789 aa16.63■□□□□ 0.25
SH3RF1-201ENST00000284637 MTF2Q9Y483 593 aaPredicted RBP16.63■□□□□ 0.25
SH3RF1-201ENST00000284637 TCRBV7S2A1N4TA0A589 114 aa16.62■□□□□ 0.25
SH3RF1-201ENST00000284637 TNFSF9P41273 254 aa16.62■□□□□ 0.25
SH3RF1-201ENST00000284637 CXCL9Q07325 125 aa16.62■□□□□ 0.25
SH3RF1-201ENST00000284637 FSTL1Q12841 308 aa16.62■□□□□ 0.25
SH3RF1-201ENST00000284637 RASGEF1CQ8N431 466 aa16.62■□□□□ 0.25
SH3RF1-201ENST00000284637 RBM15BQ8NDT2 890 aaKnown RBP16.62■□□□□ 0.25
SH3RF1-201ENST00000284637 SERPINB11Q96P15 392 aa16.62■□□□□ 0.25
SH3RF1-201ENST00000284637 KLHL1Q9NR64 748 aa16.62■□□□□ 0.25
SH3RF1-201ENST00000284637 OPTCQ9UBM4 332 aa16.62■□□□□ 0.25
SH3RF1-201ENST00000284637 TMED5Q9Y3A6 229 aa16.62■□□□□ 0.25
SH3RF1-201ENST00000284637 RAP2CQ9Y3L5 183 aa16.62■□□□□ 0.25
SH3RF1-201ENST00000284637 LRRC42Q9Y546 428 aa16.62■□□□□ 0.25
SH3RF1-201ENST00000284637 DDX3YO15523 660 aaKnown RBP16.62■□□□□ 0.25
SH3RF1-201ENST00000284637 NTRK1P04629 796 aa16.62■□□□□ 0.25
SH3RF1-201ENST00000284637 TSHRP16473 764 aa16.62■□□□□ 0.25
SH3RF1-201ENST00000284637 NOS2P35228 1153 aa16.62■□□□□ 0.25
SH3RF1-201ENST00000284637 HUNKP57058 714 aa16.62■□□□□ 0.25
SH3RF1-201ENST00000284637 ARSHQ5FYA8 562 aa16.62■□□□□ 0.25
SH3RF1-201ENST00000284637 ARHGAP36Q6ZRI8 547 aa16.62■□□□□ 0.25
SH3RF1-201ENST00000284637 PTCD3Q96EY7 689 aaKnown RBP16.62■□□□□ 0.25
SH3RF1-201ENST00000284637 CLPTM1LQ96KA5 538 aa16.62■□□□□ 0.25
SH3RF1-201ENST00000284637 TDRKHQ9Y2W6 561 aaKnown RBP16.62■□□□□ 0.25
SH3RF1-201ENST00000284637 TNS2Q63HR2 1409 aa16.62■□□□□ 0.25
SH3RF1-201ENST00000284637 CYP3A7-CYP3A51PA0A087WV96 503 aa16.62■□□□□ 0.25
SH3RF1-201ENST00000284637 RBAK-RBAKDNI3L0D1 243 aa16.62■□□□□ 0.25
SH3RF1-201ENST00000284637 MYL12BO14950 172 aa16.62■□□□□ 0.25
SH3RF1-201ENST00000284637 CYP3A7P24462 503 aa16.62■□□□□ 0.25
SH3RF1-201ENST00000284637 TKTP29401 623 aaKnown RBP16.62■□□□□ 0.25
SH3RF1-201ENST00000284637 ADAM17P78536 824 aa16.62■□□□□ 0.25
SH3RF1-201ENST00000284637 TSNQ15631 228 aaKnown RBP16.62■□□□□ 0.25
SH3RF1-201ENST00000284637 SLC1A5Q15758 541 aa16.62■□□□□ 0.25
SH3RF1-201ENST00000284637 C11orf88Q6PI97 169 aa16.62■□□□□ 0.25
SH3RF1-201ENST00000284637 CYP4Z2PQ8N1L4 340 aa16.62■□□□□ 0.25
SH3RF1-201ENST00000284637 CENPIQ92674 756 aaPredicted RBP16.62■□□□□ 0.25
SH3RF1-201ENST00000284637 CIPCQ9C0C6 399 aa16.62■□□□□ 0.25
SH3RF1-201ENST00000284637 C12orf65Q9H3J6 166 aaKnown RBP16.62■□□□□ 0.25
SH3RF1-201ENST00000284637 BTRCQ9Y297 605 aa16.62■□□□□ 0.25
SH3RF1-201ENST00000284637 EGFRP00533 1210 aa16.62■□□□□ 0.25
SH3RF1-201ENST00000284637 CYP2A7P20853 494 aa16.62■□□□□ 0.25
SH3RF1-201ENST00000284637 IL2P60568 153 aa16.62■□□□□ 0.25
SH3RF1-201ENST00000284637 ARMC6Q6NXE6 501 aa16.62■□□□□ 0.25
SH3RF1-201ENST00000284637 STAG3L4Q8TBR4 150 aa16.62■□□□□ 0.25
SH3RF1-201ENST00000284637 ACMSDQ8TDX5 336 aa16.62■□□□□ 0.25
SH3RF1-201ENST00000284637 ASZ1Q8WWH4 475 aa16.62■□□□□ 0.25
SH3RF1-201ENST00000284637 DNAJC1Q96KC8 554 aaKnown RBP16.62■□□□□ 0.25
SH3RF1-201ENST00000284637 CADM1Q9BY67 442 aaKnown RBP16.62■□□□□ 0.25
SH3RF1-201ENST00000284637 OSGEPL1Q9H4B0 414 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms