RNA–Protein interactions for RNA: ENST00000601091.5

LIG1-220, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 3,957 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-220ENST00000601091 CEP68Q76N32 757 aa10.57□□□□□ -0.72
LIG1-220ENST00000601091 ALYREFQ86V81 257 aaKnown RBP10.57□□□□□ -0.72
LIG1-220ENST00000601091 GALNT13Q8IUC8 556 aa10.57□□□□□ -0.72
LIG1-220ENST00000601091 KIAA0319LQ8IZA0 1049 aa10.57□□□□□ -0.72
LIG1-220ENST00000601091 ZNF366Q8N895 744 aa10.57□□□□□ -0.72
LIG1-220ENST00000601091 OR7G1Q8NGA0 311 aa10.57□□□□□ -0.72
LIG1-220ENST00000601091 OR6P1Q8NGX9 317 aa10.57□□□□□ -0.72
LIG1-220ENST00000601091 GTF3C2Q8WUA4 911 aaPredicted RBP10.57□□□□□ -0.72
LIG1-220ENST00000601091 JADE3Q92613 823 aa10.57□□□□□ -0.72
LIG1-220ENST00000601091 TRIM62Q9BVG3 475 aa10.57□□□□□ -0.72
LIG1-220ENST00000601091 TDRD1Q9BXT4 1180 aaKnown RBP10.57□□□□□ -0.72
LIG1-220ENST00000601091 RNF181Q9P0P0 153 aa10.57□□□□□ -0.72
LIG1-220ENST00000601091 PCDHA11Q9Y5I1 949 aa10.57□□□□□ -0.72
LIG1-220ENST00000601091 TLL2Q9Y6L7 1015 aa10.57□□□□□ -0.72
LIG1-220ENST00000601091 FAM47E-STBD1D6RA91 191 aa10.57□□□□□ -0.72
LIG1-220ENST00000601091 ALOX5P09917 674 aa10.57□□□□□ -0.72
LIG1-220ENST00000601091 PRKAR2AP13861 404 aaKnown RBP10.57□□□□□ -0.72
LIG1-220ENST00000601091 ARF4P18085 180 aaPredicted RBP10.57□□□□□ -0.72
LIG1-220ENST00000601091 NUDT2P50583 147 aa10.57□□□□□ -0.72
LIG1-220ENST00000601091 PPP1R26Q5T8A7 1209 aaPredicted RBP10.57□□□□□ -0.72
LIG1-220ENST00000601091 GRTP1Q5TC63 336 aa10.57□□□□□ -0.72
LIG1-220ENST00000601091 IYDQ6PHW0 289 aa10.57□□□□□ -0.72
LIG1-220ENST00000601091 PATL1Q86TB9 770 aaKnown RBP10.57□□□□□ -0.72
LIG1-220ENST00000601091 TREML1Q86YW5 311 aa10.57□□□□□ -0.72
LIG1-220ENST00000601091 ADGRF2Q8IZF7 708 aa10.57□□□□□ -0.72
LIG1-220ENST00000601091 DEFB107AQ8IZN7 70 aa10.57□□□□□ -0.72
LIG1-220ENST00000601091 THEM5Q8N1Q8 247 aa10.57□□□□□ -0.72
LIG1-220ENST00000601091 BBS5Q8N3I7 341 aa10.57□□□□□ -0.72
LIG1-220ENST00000601091 PPHLN1Q8NEY8 458 aaKnown RBP10.57□□□□□ -0.72
LIG1-220ENST00000601091 SLC2A14Q8TDB8 520 aa10.57□□□□□ -0.72
LIG1-220ENST00000601091 CNDP1Q96KN2 507 aa10.57□□□□□ -0.72
LIG1-220ENST00000601091 WDCPQ9H6R7 721 aa10.57□□□□□ -0.72
LIG1-220ENST00000601091 INPP5FQ9Y2H2 1132 aa10.57□□□□□ -0.72
LIG1-220ENST00000601091 ABCA3Q99758 1704 aa10.56□□□□□ -0.72
LIG1-220ENST00000601091 E9PBE3 544 aa10.56□□□□□ -0.72
LIG1-220ENST00000601091 PFDN6O15212 129 aa10.56□□□□□ -0.72
LIG1-220ENST00000601091 NCAM2O15394 837 aa10.56□□□□□ -0.72
LIG1-220ENST00000601091 SULT1B1O43704 296 aa10.56□□□□□ -0.72
LIG1-220ENST00000601091 F9P00740 461 aa10.56□□□□□ -0.72
LIG1-220ENST00000601091 GM2AP17900 193 aa10.56□□□□□ -0.72
LIG1-220ENST00000601091 CDK7P50613 346 aa10.56□□□□□ -0.72
LIG1-220ENST00000601091 CLDN10P78369 228 aa10.56□□□□□ -0.72
LIG1-220ENST00000601091 CRADDP78560 199 aa10.56□□□□□ -0.72
LIG1-220ENST00000601091 NAB1Q13506 487 aa10.56□□□□□ -0.72
LIG1-220ENST00000601091 MAPRE2Q15555 327 aa10.56□□□□□ -0.72
LIG1-220ENST00000601091 GRIK4Q16099 956 aa10.56□□□□□ -0.72
LIG1-220ENST00000601091 MYLK3Q32MK0 819 aa10.56□□□□□ -0.72
LIG1-220ENST00000601091 DEPDC1Q5TB30 811 aa10.56□□□□□ -0.72
LIG1-220ENST00000601091 CES3Q6UWW8 571 aa10.56□□□□□ -0.72
LIG1-220ENST00000601091 UNC5AQ6ZN44 842 aa10.56□□□□□ -0.72
LIG1-220ENST00000601091 KDELC2Q7Z4H8 507 aa10.56□□□□□ -0.72
LIG1-220ENST00000601091 LINC00523Q86TU6 105 aa10.56□□□□□ -0.72
LIG1-220ENST00000601091 AKAP14Q86UN6 197 aa10.56□□□□□ -0.72
LIG1-220ENST00000601091 CCDC116Q8IYX3 515 aa10.56□□□□□ -0.72
LIG1-220ENST00000601091 STARD8Q92502 1023 aa10.56□□□□□ -0.72
LIG1-220ENST00000601091 SGK3Q96BR1 496 aa10.56□□□□□ -0.72
LIG1-220ENST00000601091 TBATAQ96M53 351 aa10.56□□□□□ -0.72
LIG1-220ENST00000601091 APOL2Q9BQE5 337 aa10.56□□□□□ -0.72
LIG1-220ENST00000601091 APOL5Q9BWW9 433 aa10.56□□□□□ -0.72
LIG1-220ENST00000601091 MAGEB5Q9BZ81 275 aa10.56□□□□□ -0.72
LIG1-220ENST00000601091 TJP2Q9UDY2 1190 aa10.56□□□□□ -0.72
LIG1-220ENST00000601091 CDYLQ9Y232 598 aa10.56□□□□□ -0.72
LIG1-220ENST00000601091 LAMB2P55268 1798 aa10.56□□□□□ -0.72
LIG1-220ENST00000601091 BCLAF3A2AJT9 711 aaKnown RBP10.56□□□□□ -0.72
LIG1-220ENST00000601091 ZBTB48P10074 688 aaPredicted RBP10.56□□□□□ -0.72
LIG1-220ENST00000601091 PMLP29590 882 aa10.56□□□□□ -0.72
LIG1-220ENST00000601091 ADIGQ0VDE8 80 aa10.56□□□□□ -0.72
LIG1-220ENST00000601091 MOGQ16653 247 aa10.56□□□□□ -0.72
LIG1-220ENST00000601091 TREML2Q5T2D2 321 aa10.56□□□□□ -0.72
LIG1-220ENST00000601091 MCRS1Q96EZ8 462 aa10.56□□□□□ -0.72
LIG1-220ENST00000601091 SERAC1Q96JX3 654 aa10.56□□□□□ -0.72
LIG1-220ENST00000601091 OSMRQ99650 979 aa10.56□□□□□ -0.72
LIG1-220ENST00000601091 MRPL1Q9BYD6 325 aaKnown RBP10.56□□□□□ -0.72
LIG1-220ENST00000601091 FZD8Q9H461 694 aa10.56□□□□□ -0.72
LIG1-220ENST00000601091 MARCH7Q9H992 704 aa10.56□□□□□ -0.72
LIG1-220ENST00000601091 SETD4Q9NVD3 440 aa10.56□□□□□ -0.72
LIG1-220ENST00000601091 LOC105371267A0A1B0GV96 52 aa10.56□□□□□ -0.72
LIG1-220ENST00000601091 TCRBV7S3A2A0A539 114 aa10.56□□□□□ -0.72
LIG1-220ENST00000601091 MAGEB16A2A368 324 aa10.56□□□□□ -0.72
LIG1-220ENST00000601091 C2CD4BA6NLJ0 364 aa10.56□□□□□ -0.72
LIG1-220ENST00000601091 TPP1O14773 563 aa10.56□□□□□ -0.72
LIG1-220ENST00000601091 TRIM13O60858 407 aa10.56□□□□□ -0.72
LIG1-220ENST00000601091 DNAJC6O75061 913 aa10.56□□□□□ -0.72
LIG1-220ENST00000601091 H2AFYO75367 372 aaKnown RBP10.56□□□□□ -0.72
LIG1-220ENST00000601091 BPGMP07738 259 aa10.56□□□□□ -0.72
LIG1-220ENST00000601091 TPBGLP0DKB5 382 aa10.56□□□□□ -0.72
LIG1-220ENST00000601091 TCEA1P23193 301 aaKnown RBP10.56□□□□□ -0.72
LIG1-220ENST00000601091 NAA20P61599 178 aa10.56□□□□□ -0.72
LIG1-220ENST00000601091 ESRRGP62508 458 aa10.56□□□□□ -0.72
LIG1-220ENST00000601091 KIF19Q2TAC6 998 aa10.56□□□□□ -0.72
LIG1-220ENST00000601091 BTBD8Q5XKL5 378 aa10.56□□□□□ -0.72
LIG1-220ENST00000601091 NET1Q7Z628 596 aaPredicted RBP10.56□□□□□ -0.72
LIG1-220ENST00000601091 ZNF410Q86VK4 478 aa10.56□□□□□ -0.72
LIG1-220ENST00000601091 SPATA2LQ8IUW3 424 aaPredicted RBP10.56□□□□□ -0.72
LIG1-220ENST00000601091 ATPAF2Q8N5M1 289 aa10.56□□□□□ -0.72
LIG1-220ENST00000601091 UTP15Q8TED0 518 aaKnown RBP10.56□□□□□ -0.72
LIG1-220ENST00000601091 UTP4Q969X6 686 aaKnown RBP10.56□□□□□ -0.72
LIG1-220ENST00000601091 TMA16Q96EY4 203 aaKnown RBP10.56□□□□□ -0.72
LIG1-220ENST00000601091 HSFY1Q96LI6 401 aa10.56□□□□□ -0.72
LIG1-220ENST00000601091 CPNE1Q99829 537 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms