RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 ITPRIPL1Q6GPH6 555 aa12.53□□□□□ -0.4
USP11-206ENST00000469080 OVOS1Q6IE37 1185 aa12.53□□□□□ -0.4
USP11-206ENST00000469080 OGFOD2Q6N063 350 aa12.53□□□□□ -0.4
USP11-206ENST00000469080 TMCO2Q7Z6W1 182 aaPredicted RBP12.53□□□□□ -0.4
USP11-206ENST00000469080 TNS4Q8IZW8 715 aa12.53□□□□□ -0.4
USP11-206ENST00000469080 EFCAB3Q8N7B9 438 aa12.53□□□□□ -0.4
USP11-206ENST00000469080 SPATA22Q8NHS9 363 aa12.53□□□□□ -0.4
USP11-206ENST00000469080 TRIB2Q92519 343 aa12.53□□□□□ -0.4
USP11-206ENST00000469080 LHX5Q9H2C1 402 aa12.53□□□□□ -0.4
USP11-206ENST00000469080 ADAMTS10Q9H324 1103 aa12.53□□□□□ -0.4
USP11-206ENST00000469080 SACM1LQ9NTJ5 587 aa12.53□□□□□ -0.4
USP11-206ENST00000469080 THEGQ9P2T0 379 aa12.53□□□□□ -0.4
USP11-206ENST00000469080 COMMD10Q9Y6G5 202 aa12.53□□□□□ -0.4
USP11-206ENST00000469080 AK5Q9Y6K8 562 aa12.53□□□□□ -0.4
USP11-206ENST00000469080 CLUHO75153 1309 aa12.53□□□□□ -0.4
USP11-206ENST00000469080 LINC00854A0A1B0GVQ3 168 aa12.53□□□□□ -0.4
USP11-206ENST00000469080 KRT37O76014 449 aa12.53□□□□□ -0.4
USP11-206ENST00000469080 RPL17P18621 184 aaKnown RBP12.53□□□□□ -0.4
USP11-206ENST00000469080 CHI3L2Q15782 390 aa12.53□□□□□ -0.4
USP11-206ENST00000469080 NLRP9Q7RTR0 991 aa12.53□□□□□ -0.4
USP11-206ENST00000469080 CIR1Q86X95 450 aaPredicted RBP12.53□□□□□ -0.4
USP11-206ENST00000469080 MYLPFQ96A32 169 aa12.53□□□□□ -0.4
USP11-206ENST00000469080 MCRS1Q96EZ8 462 aa12.53□□□□□ -0.4
USP11-206ENST00000469080 TTC25Q96NG3 672 aa12.53□□□□□ -0.4
USP11-206ENST00000469080 PRDM5Q9NQX1 630 aaPredicted RBP12.53□□□□□ -0.4
USP11-206ENST00000469080 GIN1Q9NXP7 522 aa12.53□□□□□ -0.4
USP11-206ENST00000469080 VANGL2Q9ULK5 521 aa12.53□□□□□ -0.4
USP11-206ENST00000469080 TLL2Q9Y6L7 1015 aa12.53□□□□□ -0.4
USP11-206ENST00000469080 GUCY1B2O75343 617 aa12.52□□□□□ -0.4
USP11-206ENST00000469080 B3GALNT1O75752 331 aa12.52□□□□□ -0.4
USP11-206ENST00000469080 TSPAN9O75954 239 aa12.52□□□□□ -0.4
USP11-206ENST00000469080 NR4A1P22736 598 aa12.52□□□□□ -0.4
USP11-206ENST00000469080 KCNJ8Q15842 424 aa12.52□□□□□ -0.4
USP11-206ENST00000469080 C1orf146Q5VVC0 180 aa12.52□□□□□ -0.4
USP11-206ENST00000469080 RGS9BPQ6ZS82 235 aa12.52□□□□□ -0.4
USP11-206ENST00000469080 UTS2BQ765I0 119 aa12.52□□□□□ -0.4
USP11-206ENST00000469080 OTOP3Q7RTS5 596 aa12.52□□□□□ -0.4
USP11-206ENST00000469080 CENPSQ8N2Z9 138 aa12.52□□□□□ -0.4
USP11-206ENST00000469080 ST13P5Q8NFI4 369 aaPredicted RBP12.52□□□□□ -0.4
USP11-206ENST00000469080 SLC35B2Q8TB61 432 aa12.52□□□□□ -0.4
USP11-206ENST00000469080 HTR3CQ8WXA8 447 aa12.52□□□□□ -0.4
USP11-206ENST00000469080 CCDC124Q96CT7 223 aaKnown RBP12.52□□□□□ -0.4
USP11-206ENST00000469080 MAGEB18Q96M61 343 aa12.52□□□□□ -0.4
USP11-206ENST00000469080 COQ7Q99807 217 aa12.52□□□□□ -0.4
USP11-206ENST00000469080 H3BRJ5 948 aa12.52□□□□□ -0.41
USP11-206ENST00000469080 F2P00734 622 aa12.52□□□□□ -0.41
USP11-206ENST00000469080 TFAP2AP05549 437 aa12.52□□□□□ -0.41
USP11-206ENST00000469080 ENO1P06733 434 aaKnown RBP12.52□□□□□ -0.41
USP11-206ENST00000469080 ITGAVP06756 1048 aa12.52□□□□□ -0.41
USP11-206ENST00000469080 TAC1P20366 129 aa12.52□□□□□ -0.41
USP11-206ENST00000469080 SLC5A3P53794 718 aa12.52□□□□□ -0.41
USP11-206ENST00000469080 MRPS6P82932 125 aaKnown RBP12.52□□□□□ -0.41
USP11-206ENST00000469080 EFHC1Q5JVL4 640 aa12.52□□□□□ -0.41
USP11-206ENST00000469080 EGFLAMQ63HQ2 1017 aa12.52□□□□□ -0.41
USP11-206ENST00000469080 KIAA1841Q6NSI8 718 aa12.52□□□□□ -0.41
USP11-206ENST00000469080 TRABD2AQ86V40 505 aa12.52□□□□□ -0.41
USP11-206ENST00000469080 LRRC49Q8IUZ0 686 aa12.52□□□□□ -0.41
USP11-206ENST00000469080 CCNYL1Q8N7R7 359 aa12.52□□□□□ -0.41
USP11-206ENST00000469080 OR6P1Q8NGX9 317 aa12.52□□□□□ -0.41
USP11-206ENST00000469080 CAPSLQ8WWF8 208 aa12.52□□□□□ -0.41
USP11-206ENST00000469080 HPS1Q92902 700 aa12.52□□□□□ -0.41
USP11-206ENST00000469080 P2RY11Q96G91 374 aa12.52□□□□□ -0.41
USP11-206ENST00000469080 SERAC1Q96JX3 654 aa12.52□□□□□ -0.41
USP11-206ENST00000469080 OR12D3Q9UGF7 316 aa12.52□□□□□ -0.41
USP11-206ENST00000469080 LRFN2Q9ULH4 789 aa12.52□□□□□ -0.41
USP11-206ENST00000469080 BRCA1P38398 1863 aaKnown RBP12.52□□□□□ -0.41
USP11-206ENST00000469080 PFDN6O15212 129 aa12.52□□□□□ -0.41
USP11-206ENST00000469080 TP73O15350 636 aa12.52□□□□□ -0.41
USP11-206ENST00000469080 GABBR2O75899 941 aa12.52□□□□□ -0.41
USP11-206ENST00000469080 MT-CYBP00156 380 aaPredicted RBP12.52□□□□□ -0.41
USP11-206ENST00000469080 UQCRBP14927 111 aa12.52□□□□□ -0.41
USP11-206ENST00000469080 PPARGP37231 505 aaPredicted RBP12.52□□□□□ -0.41
USP11-206ENST00000469080 NOMO1Q15155 1222 aa12.52□□□□□ -0.41
USP11-206ENST00000469080 ADRM1Q16186 407 aa12.52□□□□□ -0.41
USP11-206ENST00000469080 KLHL38Q2WGJ6 581 aa12.52□□□□□ -0.41
USP11-206ENST00000469080 SFT2D3Q587I9 215 aa12.52□□□□□ -0.41
USP11-206ENST00000469080 NOMO2Q5JPE7 1267 aa12.52□□□□□ -0.41
USP11-206ENST00000469080 CERCAMQ5T4B2 595 aa12.52□□□□□ -0.41
USP11-206ENST00000469080 CDKL3Q8IVW4 592 aaPredicted RBP12.52□□□□□ -0.41
USP11-206ENST00000469080 ESX1Q8N693 406 aa12.52□□□□□ -0.41
USP11-206ENST00000469080 PQLC3Q8N755 202 aa12.52□□□□□ -0.41
USP11-206ENST00000469080 C12orf50Q8NA57 414 aaPredicted RBP12.52□□□□□ -0.41
USP11-206ENST00000469080 SMG8Q8ND04 991 aaKnown RBP12.52□□□□□ -0.41
USP11-206ENST00000469080 SLC35F5Q8WV83 523 aa12.52□□□□□ -0.41
USP11-206ENST00000469080 SEC14L1Q92503 715 aa12.52□□□□□ -0.41
USP11-206ENST00000469080 KATNAL1Q9BW62 490 aa12.52□□□□□ -0.41
USP11-206ENST00000469080 TSSK1BQ9BXA7 367 aa12.52□□□□□ -0.41
USP11-206ENST00000469080 RNF38Q9H0F5 515 aa12.52□□□□□ -0.41
USP11-206ENST00000469080 CLK4Q9HAZ1 481 aaKnown RBP12.52□□□□□ -0.41
USP11-206ENST00000469080 ARL8BQ9NVJ2 186 aa12.52□□□□□ -0.41
USP11-206ENST00000469080 SMPD4Q9NXE4 827 aa12.52□□□□□ -0.41
USP11-206ENST00000469080 DTLQ9NZJ0 730 aa12.52□□□□□ -0.41
USP11-206ENST00000469080 TBC1D30Q9Y2I9 924 aa12.52□□□□□ -0.41
USP11-206ENST00000469080 ARHGAP42A6NI28 874 aa12.51□□□□□ -0.41
USP11-206ENST00000469080 ZSCAN5BA6NJL1 495 aa12.51□□□□□ -0.41
USP11-206ENST00000469080 TBKBP1A7MCY6 615 aa12.51□□□□□ -0.41
USP11-206ENST00000469080 PTGESO14684 152 aa12.51□□□□□ -0.41
USP11-206ENST00000469080 MTRF1O75570 445 aaKnown RBP12.51□□□□□ -0.41
USP11-206ENST00000469080 LYPLA1O75608 230 aaPredicted RBP12.51□□□□□ -0.41
USP11-206ENST00000469080 AQP4P55087 323 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms