RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 SETMARQ53H47 684 aaPredicted RBP19.28■□□□□ 0.68
COL5A1-203ENST00000460264 CARD16Q5EG05 197 aa19.28■□□□□ 0.68
COL5A1-203ENST00000460264 ERN2Q76MJ5 926 aaKnown RBP19.28■□□□□ 0.68
COL5A1-203ENST00000460264 PPP1R16AQ96I34 528 aa19.28■□□□□ 0.68
COL5A1-203ENST00000460264 EPAS1Q99814 870 aa19.28■□□□□ 0.68
COL5A1-203ENST00000460264 HEPHQ9BQS7 1158 aa19.28■□□□□ 0.68
COL5A1-203ENST00000460264 TM6SF2Q9BZW4 377 aa19.28■□□□□ 0.68
COL5A1-203ENST00000460264 HPCAL4Q9UM19 191 aa19.28■□□□□ 0.68
COL5A1-203ENST00000460264 IGF2RP11717 2491 aa19.28■□□□□ 0.68
COL5A1-203ENST00000460264 TRPM6Q9BX84 2022 aa19.27■□□□□ 0.68
COL5A1-203ENST00000460264 A0A1B0GTQ1 180 aa19.27■□□□□ 0.68
COL5A1-203ENST00000460264 CREB3O43889 395 aa19.27■□□□□ 0.68
COL5A1-203ENST00000460264 RNGTTO60942 597 aaKnown RBP19.27■□□□□ 0.68
COL5A1-203ENST00000460264 TRIM16O95361 564 aa19.27■□□□□ 0.68
COL5A1-203ENST00000460264 FTLP02792 175 aaPredicted RBP19.27■□□□□ 0.68
COL5A1-203ENST00000460264 FTH1P19P0C7X4 201 aa19.27■□□□□ 0.68
COL5A1-203ENST00000460264 PSMA2P25787 234 aa19.27■□□□□ 0.68
COL5A1-203ENST00000460264 ITGB7P26010 798 aa19.27■□□□□ 0.68
COL5A1-203ENST00000460264 PBX1P40424 430 aa19.27■□□□□ 0.68
COL5A1-203ENST00000460264 DNA2P51530 1060 aa19.27■□□□□ 0.68
COL5A1-203ENST00000460264 NXPH1P58417 271 aa19.27■□□□□ 0.68
COL5A1-203ENST00000460264 IL9RQ01113 521 aa19.27■□□□□ 0.68
COL5A1-203ENST00000460264 SLC45A4Q5BKX6 768 aa19.27■□□□□ 0.68
COL5A1-203ENST00000460264 NEK5Q6P3R8 708 aa19.27■□□□□ 0.68
COL5A1-203ENST00000460264 RAB44Q7Z6P3 723 aaPredicted RBP19.27■□□□□ 0.68
COL5A1-203ENST00000460264 PLPP6Q8IY26 295 aa19.27■□□□□ 0.68
COL5A1-203ENST00000460264 MFSD2AQ8NA29 543 aa19.27■□□□□ 0.68
COL5A1-203ENST00000460264 ELF4Q99607 663 aaPredicted RBP19.27■□□□□ 0.68
COL5A1-203ENST00000460264 NEUROG3Q9Y4Z2 214 aa19.27■□□□□ 0.68
COL5A1-203ENST00000460264 COL5A1P20908 1838 aaPredicted RBP19.27■□□□□ 0.68
COL5A1-203ENST00000460264 PTPRBP23467 1997 aa19.26■□□□□ 0.67
COL5A1-203ENST00000460264 A0A1W2PQU0 124 aa19.26■□□□□ 0.67
COL5A1-203ENST00000460264 TMEM191CA6NGB0 347 aa19.26■□□□□ 0.67
COL5A1-203ENST00000460264 ZSCAN5CA6NGD5 496 aaPredicted RBP19.26■□□□□ 0.67
COL5A1-203ENST00000460264 WASH4PA8MWX3 477 aa19.26■□□□□ 0.67
COL5A1-203ENST00000460264 TLR4O00206 839 aa19.26■□□□□ 0.67
COL5A1-203ENST00000460264 KDELR3O43731 214 aa19.26■□□□□ 0.67
COL5A1-203ENST00000460264 SKILP12757 684 aa19.26■□□□□ 0.67
COL5A1-203ENST00000460264 GRK6P43250 576 aa19.26■□□□□ 0.67
COL5A1-203ENST00000460264 PRAMEF14Q5SWL7 426 aa19.26■□□□□ 0.67
COL5A1-203ENST00000460264 LEKR1Q6ZMV7 388 aa19.26■□□□□ 0.67
COL5A1-203ENST00000460264 IQCHQ86VS3 1027 aa19.26■□□□□ 0.67
COL5A1-203ENST00000460264 HORMAD1Q86X24 394 aa19.26■□□□□ 0.67
COL5A1-203ENST00000460264 RHBDD1Q8TEB9 315 aa19.26■□□□□ 0.67
COL5A1-203ENST00000460264 CDC6Q99741 560 aa19.26■□□□□ 0.67
COL5A1-203ENST00000460264 TMEM121BQ9BXQ6 578 aaPredicted RBP19.26■□□□□ 0.67
COL5A1-203ENST00000460264 TRIM7Q9C029 511 aa19.26■□□□□ 0.67
COL5A1-203ENST00000460264 ZDHHC6Q9H6R6 413 aa19.26■□□□□ 0.67
COL5A1-203ENST00000460264 CATSPERBQ9H7T0 1116 aa19.26■□□□□ 0.67
COL5A1-203ENST00000460264 GDF3Q9NR23 364 aa19.26■□□□□ 0.67
COL5A1-203ENST00000460264 GPATCH2LQ9NWQ4 482 aa19.26■□□□□ 0.67
COL5A1-203ENST00000460264 HECAQ9UBI9 543 aaPredicted RBP19.26■□□□□ 0.67
COL5A1-203ENST00000460264 KLK13Q9UKR3 277 aa19.26■□□□□ 0.67
COL5A1-203ENST00000460264 AP4E1Q9UPM8 1137 aa19.26■□□□□ 0.67
COL5A1-203ENST00000460264 A0A1W2PQJ5 194 aa19.25■□□□□ 0.67
COL5A1-203ENST00000460264 PRAMEF26H0Y7S4 382 aa19.25■□□□□ 0.67
COL5A1-203ENST00000460264 FGF10O15520 208 aaPredicted RBP19.25■□□□□ 0.67
COL5A1-203ENST00000460264 GSRP00390 522 aa19.25■□□□□ 0.67
COL5A1-203ENST00000460264 PRLRP16471 622 aa19.25■□□□□ 0.67
COL5A1-203ENST00000460264 PTMSP20962 102 aa19.25■□□□□ 0.67
COL5A1-203ENST00000460264 HTR7P34969 479 aa19.25■□□□□ 0.67
COL5A1-203ENST00000460264 NEK3P51956 506 aa19.25■□□□□ 0.67
COL5A1-203ENST00000460264 UBASH3AP57075 661 aa19.25■□□□□ 0.67
COL5A1-203ENST00000460264 YBEYP58557 167 aaPredicted RBP19.25■□□□□ 0.67
COL5A1-203ENST00000460264 TPI1P60174 286 aa19.25■□□□□ 0.67
COL5A1-203ENST00000460264 SHBQ15464 509 aa19.25■□□□□ 0.67
COL5A1-203ENST00000460264 ST3GAL2Q16842 350 aa19.25■□□□□ 0.67
COL5A1-203ENST00000460264 ZNF284Q2VY69 593 aa19.25■□□□□ 0.67
COL5A1-203ENST00000460264 PARS2Q7L3T8 475 aaKnown RBP19.25■□□□□ 0.67
COL5A1-203ENST00000460264 UMODL1-AS1Q8N2C9 162 aa19.25■□□□□ 0.67
COL5A1-203ENST00000460264 CHCHD4Q8N4Q1 142 aa19.25■□□□□ 0.67
COL5A1-203ENST00000460264 ARFGAP1Q8N6T3 406 aa19.25■□□□□ 0.67
COL5A1-203ENST00000460264 OR2AP1Q8NGE2 309 aa19.25■□□□□ 0.67
COL5A1-203ENST00000460264 OR6K2Q8NGY2 324 aa19.25■□□□□ 0.67
COL5A1-203ENST00000460264 FNIP1Q8TF40 1166 aa19.25■□□□□ 0.67
COL5A1-203ENST00000460264 ZNF653Q96CK0 615 aa19.25■□□□□ 0.67
COL5A1-203ENST00000460264 HMCESQ96FZ2 354 aa19.25■□□□□ 0.67
COL5A1-203ENST00000460264 PEBP4Q96S96 227 aa19.25■□□□□ 0.67
COL5A1-203ENST00000460264 KLC2Q9H0B6 622 aa19.25■□□□□ 0.67
COL5A1-203ENST00000460264 CNOT8Q9UFF9 292 aaKnown RBP19.25■□□□□ 0.67
COL5A1-203ENST00000460264 APOBEC2Q9Y235 224 aaKnown RBP19.25■□□□□ 0.67
COL5A1-203ENST00000460264 CA5BQ9Y2D0 317 aa19.25■□□□□ 0.67
COL5A1-203ENST00000460264 C1QTNF9BB2RNN3 333 aa19.24■□□□□ 0.67
COL5A1-203ENST00000460264 RASA4BC9J798 803 aa19.24■□□□□ 0.67
COL5A1-203ENST00000460264 GOLGA6L19H0YKK7 550 aa19.24■□□□□ 0.67
COL5A1-203ENST00000460264 RASA4O43374 803 aa19.24■□□□□ 0.67
COL5A1-203ENST00000460264 BUB1O43683 1085 aa19.24■□□□□ 0.67
COL5A1-203ENST00000460264 TMCC1O94876 653 aa19.24■□□□□ 0.67
COL5A1-203ENST00000460264 C1QTNF9P0C862 333 aa19.24■□□□□ 0.67
COL5A1-203ENST00000460264 ADRB3P13945 408 aa19.24■□□□□ 0.67
COL5A1-203ENST00000460264 GKP32189 559 aa19.24■□□□□ 0.67
COL5A1-203ENST00000460264 OVGP1Q12889 678 aa19.24■□□□□ 0.67
COL5A1-203ENST00000460264 INAVAQ3KP66 663 aa19.24■□□□□ 0.67
COL5A1-203ENST00000460264 ZSCAN23Q3MJ62 389 aa19.24■□□□□ 0.67
COL5A1-203ENST00000460264 PARP15Q460N3 678 aa19.24■□□□□ 0.67
COL5A1-203ENST00000460264 TMEM259Q4ZIN3 620 aa19.24■□□□□ 0.67
COL5A1-203ENST00000460264 HGSNATQ68CP4 663 aa19.24■□□□□ 0.67
COL5A1-203ENST00000460264 UNQ6494/PRO21346Q6UXR6 183 aa19.24■□□□□ 0.67
COL5A1-203ENST00000460264 SLCO6A1Q86UG4 719 aa19.24■□□□□ 0.67
COL5A1-203ENST00000460264 SPATS2Q86XZ4 545 aaKnown RBP19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms