RNA–Protein interactions for RNA: ENST00000311550.9

GABRB3-202, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRB3, Length 5,781 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-202ENST00000311550 SH3BGRLO75368 114 aa17.42■□□□□ 0.38
GABRB3-202ENST00000311550 PGK1P00558 417 aa17.42■□□□□ 0.38
GABRB3-202ENST00000311550 LBPP18428 481 aa17.42■□□□□ 0.38
GABRB3-202ENST00000311550 SERPINB1P30740 379 aa17.42■□□□□ 0.38
GABRB3-202ENST00000311550 NEK3P51956 506 aa17.42■□□□□ 0.38
GABRB3-202ENST00000311550 SLC44A4Q53GD3 710 aa17.42■□□□□ 0.38
GABRB3-202ENST00000311550 DHRSXQ8N5I4 330 aa17.42■□□□□ 0.38
GABRB3-202ENST00000311550 CCDC185Q8N715 623 aa17.42■□□□□ 0.38
GABRB3-202ENST00000311550 DNAJB14Q8TBM8 379 aa17.42■□□□□ 0.38
GABRB3-202ENST00000311550 RERGLQ9H628 205 aa17.42■□□□□ 0.38
GABRB3-202ENST00000311550 ARFGEF2Q9Y6D5 1785 aa17.42■□□□□ 0.38
GABRB3-202ENST00000311550 RAD23AP54725 363 aa17.42■□□□□ 0.38
GABRB3-202ENST00000311550 CDC16Q13042 620 aa17.42■□□□□ 0.38
GABRB3-202ENST00000311550 BOP1Q14137 746 aaKnown RBP17.42■□□□□ 0.38
GABRB3-202ENST00000311550 C16orf72Q14CZ0 275 aa17.42■□□□□ 0.38
GABRB3-202ENST00000311550 AMIGO2Q86SJ2 522 aa17.42■□□□□ 0.38
GABRB3-202ENST00000311550 RP9Q8TA86 221 aaKnown RBP17.42■□□□□ 0.38
GABRB3-202ENST00000311550 SDCBP2Q9H190 292 aa17.42■□□□□ 0.38
GABRB3-202ENST00000311550 DPEP3Q9H4B8 488 aa17.42■□□□□ 0.38
GABRB3-202ENST00000311550 KRT6AP02538 564 aa17.42■□□□□ 0.38
GABRB3-202ENST00000311550 KRT6BP04259 564 aa17.42■□□□□ 0.38
GABRB3-202ENST00000311550 ZNF7P17097 686 aaPredicted RBP17.42■□□□□ 0.38
GABRB3-202ENST00000311550 KRT6CP48668 564 aa17.42■□□□□ 0.38
GABRB3-202ENST00000311550 CDH13P55290 713 aa17.42■□□□□ 0.38
GABRB3-202ENST00000311550 WDR4P57081 412 aaKnown RBP17.42■□□□□ 0.38
GABRB3-202ENST00000311550 CSTF3Q12996 717 aaKnown RBP17.42■□□□□ 0.38
GABRB3-202ENST00000311550 STRADAQ7RTN6 431 aa17.42■□□□□ 0.38
GABRB3-202ENST00000311550 GPR142Q7Z601 462 aa17.42■□□□□ 0.38
GABRB3-202ENST00000311550 PLEKHA8Q96JA3 519 aa17.42■□□□□ 0.38
GABRB3-202ENST00000311550 SEMA3CQ99985 751 aa17.42■□□□□ 0.38
GABRB3-202ENST00000311550 TMEM63AO94886 807 aa17.42■□□□□ 0.38
GABRB3-202ENST00000311550 PIWIL4Q7Z3Z4 852 aaKnown RBP17.42■□□□□ 0.38
GABRB3-202ENST00000311550 HPS6Q86YV9 775 aa17.42■□□□□ 0.38
GABRB3-202ENST00000311550 MRPL57Q9BQC6 102 aaKnown RBP17.42■□□□□ 0.38
GABRB3-202ENST00000311550 RPL26L1Q9UNX3 145 aaKnown RBP17.42■□□□□ 0.38
GABRB3-202ENST00000311550 SMIM28A0A1B0GU29 152 aa17.41■□□□□ 0.38
GABRB3-202ENST00000311550 ADRA1BP35368 520 aa17.41■□□□□ 0.38
GABRB3-202ENST00000311550 FSTL1Q12841 308 aa17.41■□□□□ 0.38
GABRB3-202ENST00000311550 OTOP3Q7RTS5 596 aa17.41■□□□□ 0.38
GABRB3-202ENST00000311550 PLEKHO2Q8TD55 490 aa17.41■□□□□ 0.38
GABRB3-202ENST00000311550 MTFMTQ96DP5 389 aaKnown RBP17.41■□□□□ 0.38
GABRB3-202ENST00000311550 KLHL5Q96PQ7 755 aa17.41■□□□□ 0.38
GABRB3-202ENST00000311550 NR1H4Q96RI1 486 aaPredicted RBP17.41■□□□□ 0.38
GABRB3-202ENST00000311550 NPAS2Q99743 824 aa17.41■□□□□ 0.38
GABRB3-202ENST00000311550 CHRAC1Q9NRG0 131 aa17.41■□□□□ 0.38
GABRB3-202ENST00000311550 KANSL3Q9P2N6 904 aa17.41■□□□□ 0.38
GABRB3-202ENST00000311550 BCLAF3A2AJT9 711 aaKnown RBP17.41■□□□□ 0.38
GABRB3-202ENST00000311550 PTGES3LE9PB15 166 aa17.41■□□□□ 0.38
GABRB3-202ENST00000311550 HS6ST1O60243 411 aa17.41■□□□□ 0.38
GABRB3-202ENST00000311550 KRT8P05787 483 aa17.41■□□□□ 0.38
GABRB3-202ENST00000311550 ETS2P15036 469 aa17.41■□□□□ 0.38
GABRB3-202ENST00000311550 TPSB2P20231 275 aa17.41■□□□□ 0.38
GABRB3-202ENST00000311550 CYP2C18P33260 490 aa17.41■□□□□ 0.38
GABRB3-202ENST00000311550 CHI3L1P36222 383 aaPredicted RBP17.41■□□□□ 0.38
GABRB3-202ENST00000311550 BRCC3P46736 316 aa17.41■□□□□ 0.38
GABRB3-202ENST00000311550 TPSAB1Q15661 275 aa17.41■□□□□ 0.38
GABRB3-202ENST00000311550 HERC6Q8IVU3 1022 aa17.41■□□□□ 0.38
GABRB3-202ENST00000311550 YAF2Q8IY57 180 aa17.41■□□□□ 0.38
GABRB3-202ENST00000311550 EXOC2Q96KP1 924 aa17.41■□□□□ 0.38
GABRB3-202ENST00000311550 IPPQ9Y573 584 aa17.41■□□□□ 0.38
GABRB3-202ENST00000311550 NR2E3Q9Y5X4 410 aa17.41■□□□□ 0.38
GABRB3-202ENST00000311550 ARIH2O95376 493 aa17.41■□□□□ 0.38
GABRB3-202ENST00000311550 ABCB1P08183 1280 aaPredicted RBP17.41■□□□□ 0.38
GABRB3-202ENST00000311550 CLCN5P51795 746 aa17.41■□□□□ 0.38
GABRB3-202ENST00000311550 ATXN1P54253 815 aaKnown RBP17.41■□□□□ 0.38
GABRB3-202ENST00000311550 C9orf16Q9BUW7 83 aa17.41■□□□□ 0.38
GABRB3-202ENST00000311550 BBS2Q9BXC9 721 aa17.41■□□□□ 0.38
GABRB3-202ENST00000311550 PAIP1Q9H074 479 aaKnown RBP17.41■□□□□ 0.38
GABRB3-202ENST00000311550 STN1Q9H668 368 aaKnown RBP17.41■□□□□ 0.38
GABRB3-202ENST00000311550 COPG2Q9UBF2 871 aa17.41■□□□□ 0.38
GABRB3-202ENST00000311550 ST3GAL5Q9UNP4 418 aa17.41■□□□□ 0.38
GABRB3-202ENST00000311550 MGRN1O60291 552 aa17.41■□□□□ 0.38
GABRB3-202ENST00000311550 PSMB9P28065 219 aa17.41■□□□□ 0.38
GABRB3-202ENST00000311550 SQLEQ14534 574 aa17.41■□□□□ 0.38
GABRB3-202ENST00000311550 ITFG1Q8TB96 612 aa17.41■□□□□ 0.38
GABRB3-202ENST00000311550 MAGEE2Q8TD90 523 aaPredicted RBP17.41■□□□□ 0.38
GABRB3-202ENST00000311550 SEPT8Q92599 483 aa17.41■□□□□ 0.38
GABRB3-202ENST00000311550 DHX15O43143 795 aaKnown RBP17.4■□□□□ 0.38
GABRB3-202ENST00000311550 NELFEP18615 380 aaKnown RBP17.4■□□□□ 0.38
GABRB3-202ENST00000311550 RAP1GDS1P52306 607 aa17.4■□□□□ 0.38
GABRB3-202ENST00000311550 IL2P60568 153 aa17.4■□□□□ 0.38
GABRB3-202ENST00000311550 MBTD1Q05BQ5 628 aa17.4■□□□□ 0.38
GABRB3-202ENST00000311550 PEX6Q13608 980 aa17.4■□□□□ 0.38
GABRB3-202ENST00000311550 TJAP1Q5JTD0 557 aa17.4■□□□□ 0.38
GABRB3-202ENST00000311550 TDRPQ86YL5 185 aa17.4■□□□□ 0.38
GABRB3-202ENST00000311550 STAG3L4Q8TBR4 150 aa17.4■□□□□ 0.38
GABRB3-202ENST00000311550 BPIFA1Q9NP55 256 aa17.4■□□□□ 0.38
GABRB3-202ENST00000311550 RGS5O15539 181 aa17.4■□□□□ 0.38
GABRB3-202ENST00000311550 RETSATQ6NUM9 610 aa17.4■□□□□ 0.38
GABRB3-202ENST00000311550 GPR152Q8TDT2 470 aa17.4■□□□□ 0.38
GABRB3-202ENST00000311550 ROBO1Q9Y6N7 1651 aa17.4■□□□□ 0.38
GABRB3-202ENST00000311550 PRR23AA6NEV1 266 aa17.4■□□□□ 0.38
GABRB3-202ENST00000311550 MSI1O43347 362 aaKnown RBP17.4■□□□□ 0.38
GABRB3-202ENST00000311550 URODP06132 367 aa17.4■□□□□ 0.38
GABRB3-202ENST00000311550 HDAC10Q969S8 669 aa17.4■□□□□ 0.38
GABRB3-202ENST00000311550 FCRL2Q96LA5 508 aaPredicted RBP17.4■□□□□ 0.38
GABRB3-202ENST00000311550 SPAG4Q9NPE6 437 aa17.4■□□□□ 0.38
GABRB3-202ENST00000311550 CNGB3Q9NQW8 809 aa17.4■□□□□ 0.38
GABRB3-202ENST00000311550 LINC00854A0A1B0GVQ3 168 aa17.4■□□□□ 0.38
GABRB3-202ENST00000311550 C5orf60A6NFR6 353 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms