RNA–Protein interactions for RNA: ENST00000533801.6

ATP2C1-224, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,690 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-224ENST00000533801 NMRAL1Q9HBL8 299 aa16.18■□□□□ 0.18
ATP2C1-224ENST00000533801 GTSE1Q9NYZ3 720 aa16.18■□□□□ 0.18
ATP2C1-224ENST00000533801 CRYL1Q9Y2S2 319 aa16.18■□□□□ 0.18
ATP2C1-224ENST00000533801 GSC2O15499 205 aa16.18■□□□□ 0.18
ATP2C1-224ENST00000533801 HAPLN1P10915 354 aaPredicted RBP16.18■□□□□ 0.18
ATP2C1-224ENST00000533801 MPSTP25325 297 aa16.18■□□□□ 0.18
ATP2C1-224ENST00000533801 SLC10A7Q0GE19 358 aa16.18■□□□□ 0.18
ATP2C1-224ENST00000533801 CUL3Q13618 768 aa16.18■□□□□ 0.18
ATP2C1-224ENST00000533801 RAB41Q5JT25 222 aa16.18■□□□□ 0.18
ATP2C1-224ENST00000533801 PCSK9Q8NBP7 692 aaKnown RBP16.18■□□□□ 0.18
ATP2C1-224ENST00000533801 PPHLN1Q8NEY8 458 aaKnown RBP16.18■□□□□ 0.18
ATP2C1-224ENST00000533801 HDAC11Q96DB2 347 aa16.18■□□□□ 0.18
ATP2C1-224ENST00000533801 SLC9A7Q96T83 725 aa16.18■□□□□ 0.18
ATP2C1-224ENST00000533801 NAT9Q9BTE0 207 aa16.18■□□□□ 0.18
ATP2C1-224ENST00000533801 GPR62Q9BZJ7 368 aa16.18■□□□□ 0.18
ATP2C1-224ENST00000533801 ZCWPW2A0A1B0GU75 182 aa16.17■□□□□ 0.18
ATP2C1-224ENST00000533801 NCAM2O15394 837 aa16.17■□□□□ 0.18
ATP2C1-224ENST00000533801 FGF3P11487 239 aaPredicted RBP16.17■□□□□ 0.18
ATP2C1-224ENST00000533801 EPHA3P29320 983 aa16.17■□□□□ 0.18
ATP2C1-224ENST00000533801 HTRA3P83110 453 aa16.17■□□□□ 0.18
ATP2C1-224ENST00000533801 GEN1Q17RS7 908 aa16.17■□□□□ 0.18
ATP2C1-224ENST00000533801 TMCO2Q7Z6W1 182 aaPredicted RBP16.17■□□□□ 0.18
ATP2C1-224ENST00000533801 PHF21BQ96EK2 531 aa16.17■□□□□ 0.18
ATP2C1-224ENST00000533801 OSBPL1AQ9BXW6 950 aa16.17■□□□□ 0.18
ATP2C1-224ENST00000533801 GLOD4Q9HC38 313 aa16.17■□□□□ 0.18
ATP2C1-224ENST00000533801 SMPD4Q9NXE4 827 aa16.17■□□□□ 0.18
ATP2C1-224ENST00000533801 SIRPGQ9P1W8 387 aa16.17■□□□□ 0.18
ATP2C1-224ENST00000533801 KCTD3Q9Y597 815 aa16.17■□□□□ 0.18
ATP2C1-224ENST00000533801 SERPINE1P05121 402 aa16.17■□□□□ 0.18
ATP2C1-224ENST00000533801 CALB2P22676 271 aa16.17■□□□□ 0.18
ATP2C1-224ENST00000533801 GRTP1Q5TC63 336 aa16.17■□□□□ 0.18
ATP2C1-224ENST00000533801 NAPRTQ6XQN6 538 aa16.17■□□□□ 0.18
ATP2C1-224ENST00000533801 LIMS2Q7Z4I7 341 aa16.17■□□□□ 0.18
ATP2C1-224ENST00000533801 SKA1Q96BD8 255 aa16.17■□□□□ 0.18
ATP2C1-224ENST00000533801 ZNF512Q96ME7 567 aaPredicted RBP16.17■□□□□ 0.18
ATP2C1-224ENST00000533801 TSPAN3O60637 253 aa16.17■□□□□ 0.18
ATP2C1-224ENST00000533801 SORBS2O94875 1100 aaKnown RBP16.17■□□□□ 0.18
ATP2C1-224ENST00000533801 ARRB2P32121 409 aa16.17■□□□□ 0.18
ATP2C1-224ENST00000533801 MAPRE1Q15691 268 aaKnown RBP16.17■□□□□ 0.18
ATP2C1-224ENST00000533801 PREPLQ4J6C6 727 aaPredicted RBP16.17■□□□□ 0.18
ATP2C1-224ENST00000533801 RALGPS1Q5JS13 557 aa16.17■□□□□ 0.18
ATP2C1-224ENST00000533801 MBLAC2Q68D91 279 aa16.17■□□□□ 0.18
ATP2C1-224ENST00000533801 KYAT3Q6YP21 454 aaKnown RBP16.17■□□□□ 0.18
ATP2C1-224ENST00000533801 MICAL1Q8TDZ2 1067 aa16.17■□□□□ 0.18
ATP2C1-224ENST00000533801 IL22Q9GZX6 179 aa16.17■□□□□ 0.18
ATP2C1-224ENST00000533801 CCSER2Q9H7U1 834 aa16.17■□□□□ 0.18
ATP2C1-224ENST00000533801 TRHDEQ9UKU6 1024 aa16.17■□□□□ 0.18
ATP2C1-224ENST00000533801 DSEQ9UL01 958 aa16.17■□□□□ 0.18
ATP2C1-224ENST00000533801 AIM2O14862 343 aa16.16■□□□□ 0.18
ATP2C1-224ENST00000533801 CIB2O75838 187 aa16.16■□□□□ 0.18
ATP2C1-224ENST00000533801 GSTA2P09210 222 aa16.16■□□□□ 0.18
ATP2C1-224ENST00000533801 WNT3AP56704 352 aa16.16■□□□□ 0.18
ATP2C1-224ENST00000533801 INHBEP58166 350 aa16.16■□□□□ 0.18
ATP2C1-224ENST00000533801 MGAT3Q09327 533 aa16.16■□□□□ 0.18
ATP2C1-224ENST00000533801 SEMA3BQ13214 749 aa16.16■□□□□ 0.18
ATP2C1-224ENST00000533801 MBTPS1Q14703 1052 aa16.16■□□□□ 0.18
ATP2C1-224ENST00000533801 HSF5Q4G112 596 aaPredicted RBP16.16■□□□□ 0.18
ATP2C1-224ENST00000533801 CD300LGQ6UXG3 332 aa16.16■□□□□ 0.18
ATP2C1-224ENST00000533801 ATG14Q6ZNE5 492 aa16.16■□□□□ 0.18
ATP2C1-224ENST00000533801 KLHDC9Q8NEP7 349 aa16.16■□□□□ 0.18
ATP2C1-224ENST00000533801 NAT14Q8WUY8 206 aa16.16■□□□□ 0.18
ATP2C1-224ENST00000533801 SREK1Q8WXA9 508 aaKnown RBP16.16■□□□□ 0.18
ATP2C1-224ENST00000533801 KCNK4Q9NYG8 393 aa16.16■□□□□ 0.18
ATP2C1-224ENST00000533801 MARCH2Q9P0N8 246 aa16.16■□□□□ 0.18
ATP2C1-224ENST00000533801 A0A0U1RQS6 177 aa16.16■□□□□ 0.18
ATP2C1-224ENST00000533801 AHSGP02765 367 aa16.16■□□□□ 0.18
ATP2C1-224ENST00000533801 HNRNPLP14866 589 aaKnown RBP eCLIP16.16■□□□□ 0.184e-6■■■■□ 19.8
ATP2C1-224ENST00000533801 OR1E1P30953 314 aa16.16■□□□□ 0.18
ATP2C1-224ENST00000533801 LIMK2P53671 638 aa16.16■□□□□ 0.18
ATP2C1-224ENST00000533801 CTC1Q2NKJ3 1217 aa16.16■□□□□ 0.18
ATP2C1-224ENST00000533801 PIK3R6Q5UE93 754 aa16.16■□□□□ 0.18
ATP2C1-224ENST00000533801 KIAA1841Q6NSI8 718 aa16.16■□□□□ 0.18
ATP2C1-224ENST00000533801 FAM171BQ6P995 826 aa16.16■□□□□ 0.18
ATP2C1-224ENST00000533801 SLC24A5Q71RS6 500 aa16.16■□□□□ 0.18
ATP2C1-224ENST00000533801 NUP93Q8N1F7 819 aa16.16■□□□□ 0.18
ATP2C1-224ENST00000533801 NXNL1Q96CM4 212 aa16.16■□□□□ 0.18
ATP2C1-224ENST00000533801 SUSD3Q96L08 255 aa16.16■□□□□ 0.18
ATP2C1-224ENST00000533801 PLA2G4CQ9UP65 541 aa16.16■□□□□ 0.18
ATP2C1-224ENST00000533801 C15orf41Q9Y2V0 281 aa16.16■□□□□ 0.18
ATP2C1-224ENST00000533801 TBKBP1A7MCY6 615 aa16.16■□□□□ 0.18
ATP2C1-224ENST00000533801 TMEM233B4DJY2 109 aa16.16■□□□□ 0.18
ATP2C1-224ENST00000533801 PROCP04070 461 aa16.16■□□□□ 0.18
ATP2C1-224ENST00000533801 DNAJB2P25686 324 aa16.16■□□□□ 0.18
ATP2C1-224ENST00000533801 ARL1P40616 181 aaPredicted RBP16.16■□□□□ 0.18
ATP2C1-224ENST00000533801 ABCE1P61221 599 aaKnown RBP16.16■□□□□ 0.18
ATP2C1-224ENST00000533801 PRAMEP78395 509 aa16.16■□□□□ 0.18
ATP2C1-224ENST00000533801 GALNT3Q14435 633 aa16.16■□□□□ 0.18
ATP2C1-224ENST00000533801 ZNF789Q5FWF6 425 aa16.16■□□□□ 0.18
ATP2C1-224ENST00000533801 TCHHL1Q5QJ38 904 aaPredicted RBP16.16■□□□□ 0.18
ATP2C1-224ENST00000533801 CCNJLQ8IV13 435 aa16.16■□□□□ 0.18
ATP2C1-224ENST00000533801 DCP1BQ8IZD4 617 aaKnown RBP16.16■□□□□ 0.18
ATP2C1-224ENST00000533801 ACE2Q9BYF1 805 aaPredicted RBP16.16■□□□□ 0.18
ATP2C1-224ENST00000533801 XPR1Q9UBH6 696 aa16.16■□□□□ 0.18
ATP2C1-224ENST00000533801 MTF2Q9Y483 593 aaPredicted RBP16.16■□□□□ 0.18
ATP2C1-224ENST00000533801 ZSWIM8A7E2V4 1837 aa16.15■□□□□ 0.18
ATP2C1-224ENST00000533801 SCN4AP35499 1836 aa16.15■□□□□ 0.18
ATP2C1-224ENST00000533801 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.15■□□□□ 0.18
ATP2C1-224ENST00000533801 ZNF487B1APH4 448 aa16.15■□□□□ 0.18
ATP2C1-224ENST00000533801 MTSS1O43312 755 aa16.15■□□□□ 0.18
ATP2C1-224ENST00000533801 PEX11AO75192 247 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms