RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 NCLNQ969V3 563 aa11.48□□□□□ -0.57
SMPD4-218ENST00000482171 CLPTM1LQ96KA5 538 aa11.48□□□□□ -0.57
SMPD4-218ENST00000482171 TRIM54Q9BYV2 358 aa11.48□□□□□ -0.57
SMPD4-218ENST00000482171 ARHGAP39Q9C0H5 1083 aa11.48□□□□□ -0.57
SMPD4-218ENST00000482171 PAIP1Q9H074 479 aaKnown RBP11.48□□□□□ -0.57
SMPD4-218ENST00000482171 ACSS3Q9H6R3 686 aa11.48□□□□□ -0.57
SMPD4-218ENST00000482171 TMPRSS4Q9NRS4 437 aa11.48□□□□□ -0.57
SMPD4-218ENST00000482171 ZDHHC18Q9NUE0 388 aa11.48□□□□□ -0.57
SMPD4-218ENST00000482171 PKD2L2Q9NZM6 624 aa11.48□□□□□ -0.57
SMPD4-218ENST00000482171 COL2A1P02458 1487 aaPredicted RBP11.47□□□□□ -0.57
SMPD4-218ENST00000482171 A0A1B0GUL6 1792 aa11.47□□□□□ -0.57
SMPD4-218ENST00000482171 TPP1O14773 563 aa11.47□□□□□ -0.57
SMPD4-218ENST00000482171 ZMPSTE24O75844 475 aa11.47□□□□□ -0.57
SMPD4-218ENST00000482171 INHAP05111 366 aa11.47□□□□□ -0.57
SMPD4-218ENST00000482171 CD151P48509 253 aa11.47□□□□□ -0.57
SMPD4-218ENST00000482171 CCDC142Q17RM4 750 aa11.47□□□□□ -0.57
SMPD4-218ENST00000482171 AGAP9Q5VTM2 703 aa11.47□□□□□ -0.57
SMPD4-218ENST00000482171 ZDHHC24Q6UX98 284 aa11.47□□□□□ -0.57
SMPD4-218ENST00000482171 FAM43BQ6ZT52 329 aaPredicted RBP11.47□□□□□ -0.57
SMPD4-218ENST00000482171 SZRD1Q7Z422 152 aa11.47□□□□□ -0.57
SMPD4-218ENST00000482171 GPR141Q7Z602 305 aa11.47□□□□□ -0.57
SMPD4-218ENST00000482171 ZNF467Q7Z7K2 595 aaPredicted RBP11.47□□□□□ -0.57
SMPD4-218ENST00000482171 CACUL1Q86Y37 369 aa11.47□□□□□ -0.57
SMPD4-218ENST00000482171 TBL1YQ9BQ87 522 aa11.47□□□□□ -0.57
SMPD4-218ENST00000482171 UBE2OQ9C0C9 1292 aaKnown RBP11.47□□□□□ -0.57
SMPD4-218ENST00000482171 SLC17A7Q9P2U7 560 aa11.47□□□□□ -0.57
SMPD4-218ENST00000482171 TRIM16O95361 564 aa11.47□□□□□ -0.57
SMPD4-218ENST00000482171 GLP2RO95838 553 aa11.47□□□□□ -0.57
SMPD4-218ENST00000482171 CCND3P30281 292 aaPredicted RBP11.47□□□□□ -0.57
SMPD4-218ENST00000482171 SKIV2LQ15477 1246 aaKnown RBP11.47□□□□□ -0.57
SMPD4-218ENST00000482171 CERCAMQ5T4B2 595 aa11.47□□□□□ -0.57
SMPD4-218ENST00000482171 WDR60Q8WVS4 1066 aa11.47□□□□□ -0.57
SMPD4-218ENST00000482171 PIWIL1Q96J94 861 aaKnown RBP11.47□□□□□ -0.57
SMPD4-218ENST00000482171 EBNA1BP2Q99848 306 aaKnown RBP11.47□□□□□ -0.57
SMPD4-218ENST00000482171 TMEM165Q9HC07 324 aa11.47□□□□□ -0.57
SMPD4-218ENST00000482171 ARHGEF4Q9NR80 690 aa11.47□□□□□ -0.57
SMPD4-218ENST00000482171 SYBUQ9NX95 663 aa11.47□□□□□ -0.57
SMPD4-218ENST00000482171 TRMT6Q9UJA5 497 aaKnown RBP11.47□□□□□ -0.57
SMPD4-218ENST00000482171 H0YGN5 161 aa11.47□□□□□ -0.57
SMPD4-218ENST00000482171 CNMDO75829 334 aa11.47□□□□□ -0.57
SMPD4-218ENST00000482171 FESP07332 822 aa11.47□□□□□ -0.57
SMPD4-218ENST00000482171 MRPS22P82650 360 aaKnown RBP11.47□□□□□ -0.57
SMPD4-218ENST00000482171 BST1Q10588 318 aa11.47□□□□□ -0.57
SMPD4-218ENST00000482171 CMC1Q7Z7K0 106 aa11.47□□□□□ -0.57
SMPD4-218ENST00000482171 YAF2Q8IY57 180 aa11.47□□□□□ -0.57
SMPD4-218ENST00000482171 CYP4X1Q8N118 509 aa11.47□□□□□ -0.57
SMPD4-218ENST00000482171 SPATA6LQ8N4H0 392 aa11.47□□□□□ -0.57
SMPD4-218ENST00000482171 HNRNPABQ99729 332 aaKnown RBP11.47□□□□□ -0.57
SMPD4-218ENST00000482171 MECRQ9BV79 373 aa11.47□□□□□ -0.57
SMPD4-218ENST00000482171 XYLT2Q9H1B5 865 aa11.47□□□□□ -0.57
SMPD4-218ENST00000482171 PTPRHQ9HD43 1115 aa11.47□□□□□ -0.57
SMPD4-218ENST00000482171 TBC1D13Q9NVG8 400 aa11.47□□□□□ -0.57
SMPD4-218ENST00000482171 PLK2Q9NYY3 685 aa11.47□□□□□ -0.57
SMPD4-218ENST00000482171 GMIPQ9P107 970 aa11.47□□□□□ -0.57
SMPD4-218ENST00000482171 MORF4L1Q9UBU8 362 aa11.47□□□□□ -0.57
SMPD4-218ENST00000482171 GTF2IRD1Q9UHL9 959 aa11.47□□□□□ -0.57
SMPD4-218ENST00000482171 CDYLQ9Y232 598 aa11.47□□□□□ -0.57
SMPD4-218ENST00000482171 NFS1Q9Y697 457 aa11.47□□□□□ -0.57
SMPD4-218ENST00000482171 MYH7BA7E2Y1 1941 aa11.47□□□□□ -0.57
SMPD4-218ENST00000482171 THRAP10827 490 aa11.46□□□□□ -0.57
SMPD4-218ENST00000482171 FOXN2P32314 431 aa11.46□□□□□ -0.57
SMPD4-218ENST00000482171 ACLYP53396 1101 aa11.46□□□□□ -0.57
SMPD4-218ENST00000482171 PURAQ00577 322 aaKnown RBP11.46□□□□□ -0.57
SMPD4-218ENST00000482171 CTBP1Q13363 440 aa11.46□□□□□ -0.57
SMPD4-218ENST00000482171 DCTN2Q13561 401 aaKnown RBP11.46□□□□□ -0.57
SMPD4-218ENST00000482171 PDK3Q15120 406 aa11.46□□□□□ -0.57
SMPD4-218ENST00000482171 CYP1B1Q16678 543 aa11.46□□□□□ -0.57
SMPD4-218ENST00000482171 TRIM16LQ309B1 348 aa11.46□□□□□ -0.57
SMPD4-218ENST00000482171 INTS6LQ5JSJ4 861 aaKnown RBP11.46□□□□□ -0.57
SMPD4-218ENST00000482171 RFWD3Q6PCD5 774 aa11.46□□□□□ -0.57
SMPD4-218ENST00000482171 OTOP3Q7RTS5 596 aa11.46□□□□□ -0.57
SMPD4-218ENST00000482171 GSTCDQ8NEC7 633 aa11.46□□□□□ -0.57
SMPD4-218ENST00000482171 MCRS1Q96EZ8 462 aa11.46□□□□□ -0.57
SMPD4-218ENST00000482171 CERS2Q96G23 380 aa11.46□□□□□ -0.57
SMPD4-218ENST00000482171 CNDP1Q96KN2 507 aa11.46□□□□□ -0.57
SMPD4-218ENST00000482171 NMUR2Q9GZQ4 415 aa11.46□□□□□ -0.57
SMPD4-218ENST00000482171 COMMD3-BMI1R4GMX3 469 aa11.46□□□□□ -0.57
SMPD4-218ENST00000482171 XIRP1Q702N8 1843 aaKnown RBP11.46□□□□□ -0.57
SMPD4-218ENST00000482171 NHSQ6T4R5 1651 aa11.46□□□□□ -0.57
SMPD4-218ENST00000482171 ABLIM1O14639 778 aa11.46□□□□□ -0.57
SMPD4-218ENST00000482171 LRIG2O94898 1065 aa11.46□□□□□ -0.57
SMPD4-218ENST00000482171 LYNP07948 512 aa11.46□□□□□ -0.57
SMPD4-218ENST00000482171 ALADP13716 330 aa11.46□□□□□ -0.57
SMPD4-218ENST00000482171 ATP1A4Q13733 1029 aa11.46□□□□□ -0.57
SMPD4-218ENST00000482171 GSTA3Q16772 222 aa11.46□□□□□ -0.57
SMPD4-218ENST00000482171 B3GNT6Q6ZMB0 384 aa11.46□□□□□ -0.57
SMPD4-218ENST00000482171 GALNT15Q8N3T1 639 aa11.46□□□□□ -0.57
SMPD4-218ENST00000482171 SEMA3CQ99985 751 aa11.46□□□□□ -0.57
SMPD4-218ENST00000482171 FTHL17Q9BXU8 183 aa11.46□□□□□ -0.57
SMPD4-218ENST00000482171 COPS7BQ9H9Q2 264 aaPredicted RBP11.46□□□□□ -0.57
SMPD4-218ENST00000482171 TNFAIP8O95379 198 aa11.46□□□□□ -0.58
SMPD4-218ENST00000482171 EDN1P05305 212 aa11.46□□□□□ -0.58
SMPD4-218ENST00000482171 HIST1H2AGP0C0S8 130 aaPredicted RBP11.46□□□□□ -0.58
SMPD4-218ENST00000482171 IQCF3P0C7M6 154 aa11.46□□□□□ -0.58
SMPD4-218ENST00000482171 HIST1H2ADP20671 130 aa11.46□□□□□ -0.58
SMPD4-218ENST00000482171 MAPRE2Q15555 327 aa11.46□□□□□ -0.58
SMPD4-218ENST00000482171 SLC5A9Q2M3M2 681 aa11.46□□□□□ -0.58
SMPD4-218ENST00000482171 LPCAT4Q643R3 524 aa11.46□□□□□ -0.58
SMPD4-218ENST00000482171 NEPROQ6NW34 567 aa11.46□□□□□ -0.58
SMPD4-218ENST00000482171 RBM44Q6ZP01 1051 aaKnown RBP11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms