RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 KLHDC7BQ96G42 594 aa21.49■■□□□ 1.03
VSX1-206ENST00000444511 MYOCQ99972 504 aa21.49■■□□□ 1.03
VSX1-206ENST00000444511 C11orf70Q9BRQ4 267 aa21.49■■□□□ 1.03
VSX1-206ENST00000444511 CEP44Q9C0F1 390 aa21.49■■□□□ 1.03
VSX1-206ENST00000444511 PPARGC1AQ9UBK2 798 aaKnown RBP21.49■■□□□ 1.03
VSX1-206ENST00000444511 ZNF212Q9UDV6 495 aa21.49■■□□□ 1.03
VSX1-206ENST00000444511 DAAM1Q9Y4D1 1078 aa21.49■■□□□ 1.03
VSX1-206ENST00000444511 PKD1L2Q7Z442 2459 aa21.49■■□□□ 1.03
VSX1-206ENST00000444511 PLXNB3Q9ULL4 1909 aa21.49■■□□□ 1.03
VSX1-206ENST00000444511 FAM208BQ5VWN6 2430 aa21.48■■□□□ 1.03
VSX1-206ENST00000444511 TRABD2BA6NFA1 517 aa21.48■■□□□ 1.03
VSX1-206ENST00000444511 RFPL3O75679 317 aa21.48■■□□□ 1.03
VSX1-206ENST00000444511 PCDH8O95206 1070 aa21.48■■□□□ 1.03
VSX1-206ENST00000444511 C1SP09871 688 aa21.48■■□□□ 1.03
VSX1-206ENST00000444511 CDK4P11802 303 aa21.48■■□□□ 1.03
VSX1-206ENST00000444511 CHRNB2P17787 502 aa21.48■■□□□ 1.03
VSX1-206ENST00000444511 STAT1P42224 750 aa21.48■■□□□ 1.03
VSX1-206ENST00000444511 DNA2P51530 1060 aa21.48■■□□□ 1.03
VSX1-206ENST00000444511 JAM2P57087 298 aa21.48■■□□□ 1.03
VSX1-206ENST00000444511 C15orf59Q2T9L4 293 aaPredicted RBP21.48■■□□□ 1.03
VSX1-206ENST00000444511 ARTNQ5T4W7 220 aa21.48■■□□□ 1.03
VSX1-206ENST00000444511 SFMBT2Q5VUG0 894 aa21.48■■□□□ 1.03
VSX1-206ENST00000444511 TRIM72Q6ZMU5 477 aa21.48■■□□□ 1.03
VSX1-206ENST00000444511 CLEC17AQ6ZS10 378 aa21.48■■□□□ 1.03
VSX1-206ENST00000444511 TMPRSS12Q86WS5 348 aa21.48■■□□□ 1.03
VSX1-206ENST00000444511 PCMTD1Q96MG8 357 aaPredicted RBP21.48■■□□□ 1.03
VSX1-206ENST00000444511 HDAC8Q9BY41 377 aa21.48■■□□□ 1.03
VSX1-206ENST00000444511 FANCLQ9NW38 375 aa21.48■■□□□ 1.03
VSX1-206ENST00000444511 OR12D3Q9UGF7 316 aa21.48■■□□□ 1.03
VSX1-206ENST00000444511 PTPRBP23467 1997 aa21.48■■□□□ 1.03
VSX1-206ENST00000444511 TP53BP1Q12888 1972 aaPredicted RBP21.48■■□□□ 1.03
VSX1-206ENST00000444511 COL5A1P20908 1838 aaPredicted RBP21.48■■□□□ 1.03
VSX1-206ENST00000444511 EPHB6O15197 1021 aa21.47■■□□□ 1.03
VSX1-206ENST00000444511 LEFTY1O75610 366 aa21.47■■□□□ 1.03
VSX1-206ENST00000444511 ZMPSTE24O75844 475 aa21.47■■□□□ 1.03
VSX1-206ENST00000444511 THEGLP0DJG4 465 aa21.47■■□□□ 1.03
VSX1-206ENST00000444511 AKT2P31751 481 aa21.47■■□□□ 1.03
VSX1-206ENST00000444511 ADRA1BP35368 520 aa21.47■■□□□ 1.03
VSX1-206ENST00000444511 ETFBP38117 255 aa21.47■■□□□ 1.03
VSX1-206ENST00000444511 ANP32AP39687 249 aaKnown RBP21.47■■□□□ 1.03
VSX1-206ENST00000444511 ZNF284Q2VY69 593 aa21.47■■□□□ 1.03
VSX1-206ENST00000444511 CCDC14Q49A88 953 aa21.47■■□□□ 1.03
VSX1-206ENST00000444511 RAB6CQ53S08 254 aa21.47■■□□□ 1.03
VSX1-206ENST00000444511 RWDD4Q6NW29 188 aaKnown RBP21.47■■□□□ 1.03
VSX1-206ENST00000444511 PCDH20Q8N6Y1 951 aaKnown RBP21.47■■□□□ 1.03
VSX1-206ENST00000444511 PDCD7Q8N8D1 485 aaKnown RBP21.47■■□□□ 1.03
VSX1-206ENST00000444511 TMEM145Q8NBT3 493 aa21.47■■□□□ 1.03
VSX1-206ENST00000444511 ANKRD20A12PQ8NF67 263 aa21.47■■□□□ 1.03
VSX1-206ENST00000444511 RAB6CQ9H0N0 254 aa21.47■■□□□ 1.03
VSX1-206ENST00000444511 DKK4Q9UBT3 224 aa21.47■■□□□ 1.03
VSX1-206ENST00000444511 RAXQ9Y2V3 346 aa21.47■■□□□ 1.03
VSX1-206ENST00000444511 FREM2Q5SZK8 3169 aa21.46■■□□□ 1.03
VSX1-206ENST00000444511 DMXL2Q8TDJ6 3036 aa21.46■■□□□ 1.03
VSX1-206ENST00000444511 RNF103O00237 685 aa21.46■■□□□ 1.03
VSX1-206ENST00000444511 SDC3O75056 442 aa21.46■■□□□ 1.03
VSX1-206ENST00000444511 ZNF821O75541 412 aaPredicted RBP21.46■■□□□ 1.03
VSX1-206ENST00000444511 HNRNPA2B1P22626 353 aaKnown RBP21.46■■□□□ 1.03
VSX1-206ENST00000444511 HNF1BP35680 557 aa21.46■■□□□ 1.03
VSX1-206ENST00000444511 NSFP46459 744 aaKnown RBP21.46■■□□□ 1.03
VSX1-206ENST00000444511 ACADVLP49748 655 aa21.46■■□□□ 1.03
VSX1-206ENST00000444511 NEK3P51956 506 aa21.46■■□□□ 1.03
VSX1-206ENST00000444511 ARF5P84085 180 aa21.46■■□□□ 1.03
VSX1-206ENST00000444511 CYP4F3Q08477 520 aa21.46■■□□□ 1.03
VSX1-206ENST00000444511 CAMK2BQ13554 666 aa21.46■■□□□ 1.03
VSX1-206ENST00000444511 CARD16Q5EG05 197 aa21.46■■□□□ 1.03
VSX1-206ENST00000444511 KANSL1Q7Z3B3 1105 aa21.46■■□□□ 1.03
VSX1-206ENST00000444511 JOSD2Q8TAC2 188 aa21.46■■□□□ 1.03
VSX1-206ENST00000444511 GPT2Q8TD30 523 aa21.46■■□□□ 1.03
VSX1-206ENST00000444511 HEPHQ9BQS7 1158 aa21.46■■□□□ 1.03
VSX1-206ENST00000444511 FZD3Q9NPG1 666 aa21.46■■□□□ 1.03
VSX1-206ENST00000444511 SIK3Q9Y2K2 1263 aa21.46■■□□□ 1.03
VSX1-206ENST00000444511 FCF1Q9Y324 198 aaKnown RBP21.46■■□□□ 1.03
VSX1-206ENST00000444511 GPSM3Q9Y4H4 160 aa21.46■■□□□ 1.03
VSX1-206ENST00000444511 WASF2Q9Y6W5 498 aa21.46■■□□□ 1.03
VSX1-206ENST00000444511 C2CD4BA6NLJ0 364 aa21.45■■□□□ 1.02
VSX1-206ENST00000444511 GJB6O95452 261 aa21.45■■□□□ 1.02
VSX1-206ENST00000444511 JUPP14923 745 aa21.45■■□□□ 1.02
VSX1-206ENST00000444511 PTPN9P43378 593 aa21.45■■□□□ 1.02
VSX1-206ENST00000444511 MAPKAPK2P49137 400 aa21.45■■□□□ 1.02
VSX1-206ENST00000444511 CCNHP51946 323 aaPredicted RBP21.45■■□□□ 1.02
VSX1-206ENST00000444511 COPB1P53618 953 aaKnown RBP21.45■■□□□ 1.02
VSX1-206ENST00000444511 NRG1Q02297 640 aaPredicted RBP21.45■■□□□ 1.02
VSX1-206ENST00000444511 SYCP1Q15431 976 aa21.45■■□□□ 1.02
VSX1-206ENST00000444511 FBXL19Q6PCT2 694 aa21.45■■□□□ 1.02
VSX1-206ENST00000444511 C19orf48Q6RUI8 117 aa21.45■■□□□ 1.02
VSX1-206ENST00000444511 SASS6Q6UVJ0 657 aa21.45■■□□□ 1.02
VSX1-206ENST00000444511 STRADAQ7RTN6 431 aa21.45■■□□□ 1.02
VSX1-206ENST00000444511 NEK11Q8NG66 645 aa21.45■■□□□ 1.02
VSX1-206ENST00000444511 TSC1Q92574 1164 aa21.45■■□□□ 1.02
VSX1-206ENST00000444511 CALN1Q9BXU9 219 aa21.45■■□□□ 1.02
VSX1-206ENST00000444511 OSBPL2Q9H1P3 480 aa21.45■■□□□ 1.02
VSX1-206ENST00000444511 RETREG1Q9H6L5 497 aa21.45■■□□□ 1.02
VSX1-206ENST00000444511 ADAM22Q9P0K1 906 aa21.45■■□□□ 1.02
VSX1-206ENST00000444511 ZFR2Q9UPR6 939 aaKnown RBP21.45■■□□□ 1.02
VSX1-206ENST00000444511 KRT3P12035 628 aa21.44■■□□□ 1.02
VSX1-206ENST00000444511 RHOQP17081 205 aa21.44■■□□□ 1.02
VSX1-206ENST00000444511 CKMT2P17540 419 aa21.44■■□□□ 1.02
VSX1-206ENST00000444511 ITGB7P26010 798 aa21.44■■□□□ 1.02
VSX1-206ENST00000444511 ACVRL1P37023 503 aa21.44■■□□□ 1.02
VSX1-206ENST00000444511 MANEALQ5VSG8 457 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms