RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 GADL1Q6ZQY3 521 aa12.98□□□□□ -0.33
HERC3-203ENST00000407637 CMC1Q7Z7K0 106 aa12.98□□□□□ -0.33
HERC3-203ENST00000407637 LRRC49Q8IUZ0 686 aa12.98□□□□□ -0.33
HERC3-203ENST00000407637 THNSL1Q8IYQ7 743 aa12.98□□□□□ -0.33
HERC3-203ENST00000407637 ZCCHC7Q8N3Z6 543 aaKnown RBP12.98□□□□□ -0.33
HERC3-203ENST00000407637 MFSD4AQ8N468 514 aa12.98□□□□□ -0.33
HERC3-203ENST00000407637 CNTD1Q8N815 330 aa12.98□□□□□ -0.33
HERC3-203ENST00000407637 SNX31Q8N9S9 440 aa12.98□□□□□ -0.33
HERC3-203ENST00000407637 KCTD6Q8NC69 237 aa12.98□□□□□ -0.33
HERC3-203ENST00000407637 SLC7A3Q8WY07 619 aa12.98□□□□□ -0.33
HERC3-203ENST00000407637 ZNF516Q92618 1163 aa12.98□□□□□ -0.33
HERC3-203ENST00000407637 TOP1MTQ969P6 601 aa12.98□□□□□ -0.33
HERC3-203ENST00000407637 CYP26B1Q9NR63 512 aa12.98□□□□□ -0.33
HERC3-203ENST00000407637 WARS2Q9UGM6 360 aaKnown RBP12.98□□□□□ -0.33
HERC3-203ENST00000407637 AURKCQ9UQB9 309 aa12.98□□□□□ -0.33
HERC3-203ENST00000407637 PCDHA11Q9Y5I1 949 aa12.98□□□□□ -0.33
HERC3-203ENST00000407637 IRS2Q9Y4H2 1338 aa12.97□□□□□ -0.33
HERC3-203ENST00000407637 TRIM24O15164 1050 aa12.97□□□□□ -0.33
HERC3-203ENST00000407637 SCO2O43819 266 aa12.97□□□□□ -0.33
HERC3-203ENST00000407637 BCAS1O75363 584 aaPredicted RBP12.97□□□□□ -0.33
HERC3-203ENST00000407637 MAP3K6O95382 1288 aa12.97□□□□□ -0.33
HERC3-203ENST00000407637 HLA-DRAP01903 254 aa12.97□□□□□ -0.33
HERC3-203ENST00000407637 CALB1P05937 261 aa12.97□□□□□ -0.33
HERC3-203ENST00000407637 KRT7P08729 469 aa12.97□□□□□ -0.33
HERC3-203ENST00000407637 MAPTP10636 758 aaKnown RBP12.97□□□□□ -0.33
HERC3-203ENST00000407637 BMP4P12644 408 aa12.97□□□□□ -0.33
HERC3-203ENST00000407637 ECT2LQ008S8 904 aa12.97□□□□□ -0.33
HERC3-203ENST00000407637 VPS72Q15906 364 aa12.97□□□□□ -0.33
HERC3-203ENST00000407637 TAZQ16635 292 aa12.97□□□□□ -0.33
HERC3-203ENST00000407637 CEP78Q5JTW2 689 aa12.97□□□□□ -0.33
HERC3-203ENST00000407637 GTF2IRD2BQ6EKJ0 949 aa12.97□□□□□ -0.33
HERC3-203ENST00000407637 XAF1Q6GPH4 301 aa12.97□□□□□ -0.33
HERC3-203ENST00000407637 ZNF534Q76KX8 674 aa12.97□□□□□ -0.33
HERC3-203ENST00000407637 GTF2IRD2Q86UP8 949 aa12.97□□□□□ -0.33
HERC3-203ENST00000407637 DCP2Q8IU60 420 aaKnown RBP12.97□□□□□ -0.33
HERC3-203ENST00000407637 COLGALT2Q8IYK4 626 aa12.97□□□□□ -0.33
HERC3-203ENST00000407637 PACRGLQ8N7B6 248 aa12.97□□□□□ -0.33
HERC3-203ENST00000407637 SIGLEC10Q96LC7 697 aa12.97□□□□□ -0.33
HERC3-203ENST00000407637 MFSD14AQ96MC6 490 aa12.97□□□□□ -0.33
HERC3-203ENST00000407637 CDK5RAP1Q96SZ6 601 aaKnown RBP12.97□□□□□ -0.33
HERC3-203ENST00000407637 RMDN3Q96TC7 470 aa12.97□□□□□ -0.33
HERC3-203ENST00000407637 AMNQ9BXJ7 453 aa12.97□□□□□ -0.33
HERC3-203ENST00000407637 PAK5Q9P286 719 aa12.97□□□□□ -0.33
HERC3-203ENST00000407637 ENPP5Q9UJA9 477 aa12.97□□□□□ -0.33
HERC3-203ENST00000407637 MYO18AQ92614 2054 aaKnown RBP12.97□□□□□ -0.33
HERC3-203ENST00000407637 TMEM150BA6NC51 233 aa12.97□□□□□ -0.33
HERC3-203ENST00000407637 SNPHO15079 494 aa12.97□□□□□ -0.33
HERC3-203ENST00000407637 SLC22A2O15244 555 aa12.97□□□□□ -0.33
HERC3-203ENST00000407637 LTFP02788 710 aa12.97□□□□□ -0.33
HERC3-203ENST00000407637 ATP6V1B2P21281 511 aa12.97□□□□□ -0.33
HERC3-203ENST00000407637 ELK4P28324 431 aa12.97□□□□□ -0.33
HERC3-203ENST00000407637 IFNA8P32881 189 aa12.97□□□□□ -0.33
HERC3-203ENST00000407637 GRIA1P42261 906 aa12.97□□□□□ -0.33
HERC3-203ENST00000407637 KRT6CP48668 564 aa12.97□□□□□ -0.33
HERC3-203ENST00000407637 PLA2G16P53816 162 aa12.97□□□□□ -0.33
HERC3-203ENST00000407637 GABPAQ06546 454 aa12.97□□□□□ -0.33
HERC3-203ENST00000407637 CUL2Q13617 745 aa12.97□□□□□ -0.33
HERC3-203ENST00000407637 NOMO1Q15155 1222 aa12.97□□□□□ -0.33
HERC3-203ENST00000407637 INTS11Q5TA45 600 aaKnown RBP12.97□□□□□ -0.33
HERC3-203ENST00000407637 KIAA0408Q6ZU52 694 aa12.97□□□□□ -0.33
HERC3-203ENST00000407637 SLCO6A1Q86UG4 719 aa12.97□□□□□ -0.33
HERC3-203ENST00000407637 ARMC8Q8IUR7 673 aa12.97□□□□□ -0.33
HERC3-203ENST00000407637 KIAA0319LQ8IZA0 1049 aa12.97□□□□□ -0.33
HERC3-203ENST00000407637 PLD6Q8N2A8 252 aaKnown RBP12.97□□□□□ -0.33
HERC3-203ENST00000407637 NAT16Q8N8M0 369 aa12.97□□□□□ -0.33
HERC3-203ENST00000407637 NIPA2Q8N8Q9 360 aa12.97□□□□□ -0.33
HERC3-203ENST00000407637 DUS3LQ96G46 650 aaKnown RBP12.97□□□□□ -0.33
HERC3-203ENST00000407637 FBXL18Q96ME1 805 aa12.97□□□□□ -0.33
HERC3-203ENST00000407637 EMILIN2Q9BXX0 1053 aa12.97□□□□□ -0.33
HERC3-203ENST00000407637 APOBEC3GQ9HC16 384 aaKnown RBP12.97□□□□□ -0.33
HERC3-203ENST00000407637 MRGBPQ9NV56 204 aa12.97□□□□□ -0.33
HERC3-203ENST00000407637 PKD2L2Q9NZM6 624 aa12.97□□□□□ -0.33
HERC3-203ENST00000407637 OAZ3Q9UMX2 235 aa12.97□□□□□ -0.33
HERC3-203ENST00000407637 EI24O14681 340 aa12.96□□□□□ -0.33
HERC3-203ENST00000407637 HDAC3O15379 428 aa12.96□□□□□ -0.33
HERC3-203ENST00000407637 TIMM44O43615 452 aa12.96□□□□□ -0.33
HERC3-203ENST00000407637 STAM2O75886 525 aa12.96□□□□□ -0.33
HERC3-203ENST00000407637 KRT3P12035 628 aa12.96□□□□□ -0.33
HERC3-203ENST00000407637 TYK2P29597 1187 aa12.96□□□□□ -0.33
HERC3-203ENST00000407637 CAPGP40121 348 aa12.96□□□□□ -0.33
HERC3-203ENST00000407637 CRKLP46109 303 aaKnown RBP12.96□□□□□ -0.33
HERC3-203ENST00000407637 LIG4P49917 911 aa12.96□□□□□ -0.33
HERC3-203ENST00000407637 DLG2Q15700 870 aa12.96□□□□□ -0.33
HERC3-203ENST00000407637 GLRA4Q5JXX5 417 aa12.96□□□□□ -0.33
HERC3-203ENST00000407637 TBCELQ5QJ74 424 aa12.96□□□□□ -0.33
HERC3-203ENST00000407637 ZNF280DQ6N043 979 aa12.96□□□□□ -0.33
HERC3-203ENST00000407637 CRTC3Q6UUV7 619 aa12.96□□□□□ -0.33
HERC3-203ENST00000407637 CYP4V2Q6ZWL3 525 aaPredicted RBP12.96□□□□□ -0.33
HERC3-203ENST00000407637 PIGZQ86VD9 579 aa12.96□□□□□ -0.33
HERC3-203ENST00000407637 FBXO11Q86XK2 927 aa12.96□□□□□ -0.33
HERC3-203ENST00000407637 GRAMD2AQ8IUY3 354 aa12.96□□□□□ -0.33
HERC3-203ENST00000407637 JOSD2Q8TAC2 188 aa12.96□□□□□ -0.33
HERC3-203ENST00000407637 SEZ6LQ9BYH1 1024 aa12.96□□□□□ -0.33
HERC3-203ENST00000407637 SDCBP2Q9H190 292 aa12.96□□□□□ -0.33
HERC3-203ENST00000407637 UNC93B1Q9H1C4 597 aa12.96□□□□□ -0.33
HERC3-203ENST00000407637 PDZD7Q9H5P4 517 aa12.96□□□□□ -0.33
HERC3-203ENST00000407637 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.96□□□□□ -0.33
HERC3-203ENST00000407637 SATB2Q9UPW6 733 aa12.96□□□□□ -0.33
HERC3-203ENST00000407637 CDYLQ9Y232 598 aa12.96□□□□□ -0.33
HERC3-203ENST00000407637 SLX4Q8IY92 1834 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms