RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 GK5Q6ZS86 529 aa14.85□□□□□ -0.03
VPS36-207ENST00000611132 NIPA2Q8N8Q9 360 aa14.85□□□□□ -0.03
VPS36-207ENST00000611132 UTP4Q969X6 686 aaKnown RBP14.85□□□□□ -0.03
VPS36-207ENST00000611132 NOL6Q9H6R4 1146 aaKnown RBP14.85□□□□□ -0.03
VPS36-207ENST00000611132 PLK2Q9NYY3 685 aa14.85□□□□□ -0.03
VPS36-207ENST00000611132 KLK14Q9P0G3 267 aa14.85□□□□□ -0.03
VPS36-207ENST00000611132 C4AP0C0L4 1744 aa14.84□□□□□ -0.03
VPS36-207ENST00000611132 C4BP0C0L5 1744 aa14.84□□□□□ -0.03
VPS36-207ENST00000611132 MATN2O00339 956 aa14.84□□□□□ -0.03
VPS36-207ENST00000611132 T-ENOLP0DO92 83 aa14.84□□□□□ -0.03
VPS36-207ENST00000611132 HNRNPLP14866 589 aaKnown RBP eCLIP14.84□□□□□ -0.03
VPS36-207ENST00000611132 CHRM3P20309 590 aa14.84□□□□□ -0.03
VPS36-207ENST00000611132 AKT1P31749 480 aa14.84□□□□□ -0.03
VPS36-207ENST00000611132 ZIK1Q3SY52 487 aaPredicted RBP14.84□□□□□ -0.03
VPS36-207ENST00000611132 DALRD3Q5D0E6 543 aaKnown RBP14.84□□□□□ -0.03
VPS36-207ENST00000611132 FBXO47Q5MNV8 452 aa14.84□□□□□ -0.03
VPS36-207ENST00000611132 NEPROQ6NW34 567 aa14.84□□□□□ -0.03
VPS36-207ENST00000611132 ADGRF2Q8IZF7 708 aa14.84□□□□□ -0.03
VPS36-207ENST00000611132 ZDHHC14Q8IZN3 488 aa14.84□□□□□ -0.03
VPS36-207ENST00000611132 TFAP2BQ92481 460 aa14.84□□□□□ -0.03
VPS36-207ENST00000611132 DDX1Q92499 740 aaKnown RBP14.84□□□□□ -0.03
VPS36-207ENST00000611132 MRPL57Q9BQC6 102 aaKnown RBP14.84□□□□□ -0.03
VPS36-207ENST00000611132 GATA5Q9BWX5 397 aaPredicted RBP14.84□□□□□ -0.03
VPS36-207ENST00000611132 GLIS2Q9BZE0 524 aaPredicted RBP14.84□□□□□ -0.03
VPS36-207ENST00000611132 EIF3LQ9Y262 564 aaKnown RBP14.84□□□□□ -0.03
VPS36-207ENST00000611132 C10orf71Q711Q0 1435 aa14.84□□□□□ -0.03
VPS36-207ENST00000611132 DYTNA2CJ06 578 aa14.84□□□□□ -0.03
VPS36-207ENST00000611132 CCDC154A6NI56 674 aa14.84□□□□□ -0.03
VPS36-207ENST00000611132 H6PDO95479 791 aa14.84□□□□□ -0.03
VPS36-207ENST00000611132 TGFB3P10600 412 aa14.84□□□□□ -0.03
VPS36-207ENST00000611132 CDK18Q07002 472 aa14.84□□□□□ -0.03
VPS36-207ENST00000611132 ARL13AQ5H913 290 aaPredicted RBP14.84□□□□□ -0.03
VPS36-207ENST00000611132 TMC5Q6UXY8 1006 aa14.84□□□□□ -0.03
VPS36-207ENST00000611132 AFG1LQ8WV93 481 aa14.84□□□□□ -0.03
VPS36-207ENST00000611132 P2RY11Q96G91 374 aa14.84□□□□□ -0.03
VPS36-207ENST00000611132 ASB2Q96Q27 587 aa14.84□□□□□ -0.03
VPS36-207ENST00000611132 SH3GL1Q99961 368 aa14.84□□□□□ -0.03
VPS36-207ENST00000611132 NTPCRQ9BSD7 190 aaKnown RBP14.84□□□□□ -0.03
VPS36-207ENST00000611132 TRIM54Q9BYV2 358 aa14.84□□□□□ -0.03
VPS36-207ENST00000611132 GIMAP4Q9NUV9 329 aa14.84□□□□□ -0.03
VPS36-207ENST00000611132 FADS3Q9Y5Q0 445 aa14.84□□□□□ -0.03
VPS36-207ENST00000611132 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.84□□□□□ -0.03
VPS36-207ENST00000611132 NCF1BA6NI72 391 aaPredicted RBP14.84□□□□□ -0.03
VPS36-207ENST00000611132 NCF1CA8MVU1 366 aaPredicted RBP14.84□□□□□ -0.03
VPS36-207ENST00000611132 NRP2O60462 931 aa14.84□□□□□ -0.03
VPS36-207ENST00000611132 VTNP04004 478 aa14.84□□□□□ -0.03
VPS36-207ENST00000611132 PABPC4LP0CB38 370 aaKnown RBP14.84□□□□□ -0.03
VPS36-207ENST00000611132 NCF1P14598 390 aaPredicted RBP14.84□□□□□ -0.03
VPS36-207ENST00000611132 LBPP18428 481 aa14.84□□□□□ -0.03
VPS36-207ENST00000611132 ITGAXP20702 1163 aa14.84□□□□□ -0.03
VPS36-207ENST00000611132 RAB10P61026 200 aa14.84□□□□□ -0.03
VPS36-207ENST00000611132 LSM12Q3MHD2 195 aaKnown RBP14.84□□□□□ -0.03
VPS36-207ENST00000611132 SGO1Q5FBB7 561 aa14.84□□□□□ -0.03
VPS36-207ENST00000611132 OTUD5Q96G74 571 aa14.84□□□□□ -0.03
VPS36-207ENST00000611132 KAT6AQ92794 2004 aa14.84□□□□□ -0.03
VPS36-207ENST00000611132 SLC15A5A6NIM6 579 aa14.83□□□□□ -0.03
VPS36-207ENST00000611132 PLA2G6O60733 806 aa14.83□□□□□ -0.03
VPS36-207ENST00000611132 CFHP08603 1231 aa14.83□□□□□ -0.03
VPS36-207ENST00000611132 ETFBP38117 255 aa14.83□□□□□ -0.03
VPS36-207ENST00000611132 POLD3Q15054 466 aaPredicted RBP14.83□□□□□ -0.03
VPS36-207ENST00000611132 PCID2Q5JVF3 399 aa14.83□□□□□ -0.03
VPS36-207ENST00000611132 OR7A2PQ8NGA2 310 aa14.83□□□□□ -0.03
VPS36-207ENST00000611132 ITFG1Q8TB96 612 aa14.83□□□□□ -0.03
VPS36-207ENST00000611132 FIG4Q92562 907 aa14.83□□□□□ -0.03
VPS36-207ENST00000611132 RAD54BQ9Y620 910 aa14.83□□□□□ -0.03
VPS36-207ENST00000611132 NFASCO94856 1347 aa14.83□□□□□ -0.04
VPS36-207ENST00000611132 CXorf49A8MYA2 514 aaPredicted RBP14.83□□□□□ -0.04
VPS36-207ENST00000611132 MYO1DO94832 1006 aa14.83□□□□□ -0.04
VPS36-207ENST00000611132 GRIK1P39086 918 aa14.83□□□□□ -0.04
VPS36-207ENST00000611132 CCR3P51677 355 aa14.83□□□□□ -0.04
VPS36-207ENST00000611132 NRLP54845 237 aa14.83□□□□□ -0.04
VPS36-207ENST00000611132 TNK2Q07912 1038 aa14.83□□□□□ -0.04
VPS36-207ENST00000611132 VAC14Q08AM6 782 aa14.83□□□□□ -0.04
VPS36-207ENST00000611132 EPS8Q12929 822 aa14.83□□□□□ -0.04
VPS36-207ENST00000611132 RALGDSQ12967 914 aa14.83□□□□□ -0.04
VPS36-207ENST00000611132 HEATR4Q86WZ0 1026 aa14.83□□□□□ -0.04
VPS36-207ENST00000611132 SLC2A14Q8TDB8 520 aa14.83□□□□□ -0.04
VPS36-207ENST00000611132 BBS2Q9BXC9 721 aa14.83□□□□□ -0.04
VPS36-207ENST00000611132 UGT2B28Q9BY64 529 aa14.83□□□□□ -0.04
VPS36-207ENST00000611132 CXorf21Q9HAI6 301 aa14.83□□□□□ -0.04
VPS36-207ENST00000611132 TBC1D13Q9NVG8 400 aa14.83□□□□□ -0.04
VPS36-207ENST00000611132 TRMT6Q9UJA5 497 aaKnown RBP14.83□□□□□ -0.04
VPS36-207ENST00000611132 PKP3Q9Y446 797 aa14.83□□□□□ -0.04
VPS36-207ENST00000611132 ATP6AP2A0A1C7CYW4 349 aa14.83□□□□□ -0.04
VPS36-207ENST00000611132 PAPSS1O43252 624 aaPredicted RBP14.83□□□□□ -0.04
VPS36-207ENST00000611132 RNASEH1O60930 286 aaKnown RBP14.83□□□□□ -0.04
VPS36-207ENST00000611132 ATP6AP2O75787 350 aa14.83□□□□□ -0.04
VPS36-207ENST00000611132 RSBN1Q5VWQ0 802 aaPredicted RBP14.83□□□□□ -0.04
VPS36-207ENST00000611132 ERI1Q8IV48 349 aaKnown RBP14.83□□□□□ -0.04
VPS36-207ENST00000611132 EID3Q8N140 333 aa14.83□□□□□ -0.04
VPS36-207ENST00000611132 TRAPPC12Q8WVT3 735 aa14.83□□□□□ -0.04
VPS36-207ENST00000611132 SETD4Q9NVD3 440 aa14.83□□□□□ -0.04
VPS36-207ENST00000611132 AFF4Q9UHB7 1163 aaKnown RBP14.83□□□□□ -0.04
VPS36-207ENST00000611132 EGFL7Q9UHF1 273 aa14.83□□□□□ -0.04
VPS36-207ENST00000611132 HS6ST1O60243 411 aa14.83□□□□□ -0.04
VPS36-207ENST00000611132 ZNF862O60290 1169 aa14.83□□□□□ -0.04
VPS36-207ENST00000611132 LTA4HP09960 611 aaKnown RBP14.83□□□□□ -0.04
VPS36-207ENST00000611132 MAP3K7CLP57077 242 aa14.83□□□□□ -0.04
VPS36-207ENST00000611132 TRIM25Q14258 630 aaKnown RBP14.83□□□□□ -0.04
VPS36-207ENST00000611132 PRAMEF18Q5VWM3 479 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 161.7 ms