RNA–Protein interactions for RNA: ENST00000560777.5

RABGGTA-218, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5 BASIC

Gene RABGGTA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-218ENST00000560777 TRIM10Q9UDY6 481 aa12.23□□□□□ -0.45
RABGGTA-218ENST00000560777 SUN2Q9UH99 717 aa12.23□□□□□ -0.45
RABGGTA-218ENST00000560777 CACNA1HO95180 2353 aa12.22□□□□□ -0.45
RABGGTA-218ENST00000560777 NUP205Q92621 2012 aa12.22□□□□□ -0.45
RABGGTA-218ENST00000560777 CHD5Q8TDI0 1954 aa12.22□□□□□ -0.45
RABGGTA-218ENST00000560777 CCDC163A0A0D9SF12 145 aa12.22□□□□□ -0.45
RABGGTA-218ENST00000560777 RASA4BC9J798 803 aa12.22□□□□□ -0.45
RABGGTA-218ENST00000560777 K7ERQ8 282 aa12.22□□□□□ -0.45
RABGGTA-218ENST00000560777 DCLK1O15075 740 aa12.22□□□□□ -0.45
RABGGTA-218ENST00000560777 RASA4O43374 803 aa12.22□□□□□ -0.45
RABGGTA-218ENST00000560777 KDELR3O43731 214 aa12.22□□□□□ -0.45
RABGGTA-218ENST00000560777 SPOPO43791 374 aa12.22□□□□□ -0.45
RABGGTA-218ENST00000560777 ATP9BO43861 1147 aa12.22□□□□□ -0.45
RABGGTA-218ENST00000560777 SYNCRIPO60506 623 aaKnown RBP12.22□□□□□ -0.45
RABGGTA-218ENST00000560777 ALDH1A2O94788 518 aa12.22□□□□□ -0.45
RABGGTA-218ENST00000560777 CD160O95971 181 aa12.22□□□□□ -0.45
RABGGTA-218ENST00000560777 GABRG2P18507 467 aa12.22□□□□□ -0.45
RABGGTA-218ENST00000560777 KDELR1P24390 212 aa12.22□□□□□ -0.45
RABGGTA-218ENST00000560777 ETFBP38117 255 aa12.22□□□□□ -0.45
RABGGTA-218ENST00000560777 NNMTP40261 264 aa12.22□□□□□ -0.45
RABGGTA-218ENST00000560777 NDST2P52849 883 aa12.22□□□□□ -0.45
RABGGTA-218ENST00000560777 NAP1L1P55209 391 aaKnown RBP12.22□□□□□ -0.45
RABGGTA-218ENST00000560777 ARF5P84085 180 aa12.22□□□□□ -0.45
RABGGTA-218ENST00000560777 HNRNPA1L2Q32P51 320 aaKnown RBP12.22□□□□□ -0.45
RABGGTA-218ENST00000560777 PARP15Q460N3 678 aa12.22□□□□□ -0.45
RABGGTA-218ENST00000560777 C9orf64Q5T6V5 341 aa12.22□□□□□ -0.45
RABGGTA-218ENST00000560777 AFMIDQ63HM1 303 aa12.22□□□□□ -0.45
RABGGTA-218ENST00000560777 ANO7Q6IWH7 933 aa12.22□□□□□ -0.45
RABGGTA-218ENST00000560777 C11orf63Q6NUN7 778 aa12.22□□□□□ -0.45
RABGGTA-218ENST00000560777 LINGO4Q6UY18 593 aa12.22□□□□□ -0.45
RABGGTA-218ENST00000560777 DAAM2Q86T65 1068 aa12.22□□□□□ -0.45
RABGGTA-218ENST00000560777 WDR5BQ86VZ2 330 aa12.22□□□□□ -0.45
RABGGTA-218ENST00000560777 LONP2Q86WA8 852 aa12.22□□□□□ -0.45
RABGGTA-218ENST00000560777 RHOT1Q8IXI2 618 aa12.22□□□□□ -0.45
RABGGTA-218ENST00000560777 TXLNBQ8N3L3 684 aa12.22□□□□□ -0.45
RABGGTA-218ENST00000560777 SH2D3CQ8N5H7 860 aa12.22□□□□□ -0.45
RABGGTA-218ENST00000560777 NPWQ8N729 165 aa12.22□□□□□ -0.45
RABGGTA-218ENST00000560777 NETO2Q8NC67 525 aa12.22□□□□□ -0.45
RABGGTA-218ENST00000560777 HMGB4Q8WW32 186 aa12.22□□□□□ -0.45
RABGGTA-218ENST00000560777 ATOH1Q92858 354 aaPredicted RBP12.22□□□□□ -0.45
RABGGTA-218ENST00000560777 PTPRN2Q92932 1015 aa12.22□□□□□ -0.45
RABGGTA-218ENST00000560777 HMCESQ96FZ2 354 aa12.22□□□□□ -0.45
RABGGTA-218ENST00000560777 CELF6Q96J87 481 aaKnown RBP12.22□□□□□ -0.45
RABGGTA-218ENST00000560777 SLC39A8Q9C0K1 460 aa12.22□□□□□ -0.45
RABGGTA-218ENST00000560777 MKRN2Q9H000 416 aaKnown RBP12.22□□□□□ -0.45
RABGGTA-218ENST00000560777 IRF2BPLQ9H1B7 796 aa12.22□□□□□ -0.45
RABGGTA-218ENST00000560777 RCOR3Q9P2K3 495 aaPredicted RBP12.22□□□□□ -0.45
RABGGTA-218ENST00000560777 SLC25A13Q9UJS0 675 aa12.22□□□□□ -0.45
RABGGTA-218ENST00000560777 HS3ST2Q9Y278 367 aa12.22□□□□□ -0.45
RABGGTA-218ENST00000560777 MFHAS1Q9Y4C4 1052 aa12.22□□□□□ -0.45
RABGGTA-218ENST00000560777 ARIH1Q9Y4X5 557 aaPredicted RBP12.22□□□□□ -0.45
RABGGTA-218ENST00000560777 ACTL7AQ9Y615 435 aa12.22□□□□□ -0.45
RABGGTA-218ENST00000560777 MUC22E2RYF6 1773 aaPredicted RBP12.22□□□□□ -0.45
RABGGTA-218ENST00000560777 MUC6Q6W4X9 2439 aa12.21□□□□□ -0.45
RABGGTA-218ENST00000560777 CXorf51AA0A1B0GTR3 108 aa12.21□□□□□ -0.45
RABGGTA-218ENST00000560777 MACROD2A1Z1Q3 448 aa12.21□□□□□ -0.45
RABGGTA-218ENST00000560777 TARSL2A2RTX5 802 aaKnown RBP12.21□□□□□ -0.45
RABGGTA-218ENST00000560777 GRID2IPA4D2P6 1211 aa12.21□□□□□ -0.45
RABGGTA-218ENST00000560777 C3orf70A6NLC5 250 aaPredicted RBP12.21□□□□□ -0.45
RABGGTA-218ENST00000560777 AXIN1O15169 862 aa12.21□□□□□ -0.45
RABGGTA-218ENST00000560777 SMAD6O43541 496 aaKnown RBP12.21□□□□□ -0.45
RABGGTA-218ENST00000560777 HRO43593 1189 aa12.21□□□□□ -0.45
RABGGTA-218ENST00000560777 LILRB5O75023 590 aa12.21□□□□□ -0.45
RABGGTA-218ENST00000560777 C7P10643 843 aa12.21□□□□□ -0.45
RABGGTA-218ENST00000560777 SRCP12931 536 aa12.21□□□□□ -0.45
RABGGTA-218ENST00000560777 TNNT1P13805 278 aa12.21□□□□□ -0.45
RABGGTA-218ENST00000560777 VAV1P15498 845 aa12.21□□□□□ -0.45
RABGGTA-218ENST00000560777 PAPOLAP51003 745 aaKnown RBP12.21□□□□□ -0.45
RABGGTA-218ENST00000560777 COPAP53621 1224 aa12.21□□□□□ -0.45
RABGGTA-218ENST00000560777 SLC20A2Q08357 652 aa12.21□□□□□ -0.45
RABGGTA-218ENST00000560777 SERINC3Q13530 473 aa12.21□□□□□ -0.45
RABGGTA-218ENST00000560777 STARD3Q14849 445 aa12.21□□□□□ -0.45
RABGGTA-218ENST00000560777 DLG2Q15700 870 aa12.21□□□□□ -0.45
RABGGTA-218ENST00000560777 ANKRD20A8PQ5CZ79 823 aa12.21□□□□□ -0.45
RABGGTA-218ENST00000560777 RETSATQ6NUM9 610 aa12.21□□□□□ -0.45
RABGGTA-218ENST00000560777 TMPRSS6Q8IU80 811 aa12.21□□□□□ -0.45
RABGGTA-218ENST00000560777 MAP7D3Q8IWC1 876 aa12.21□□□□□ -0.45
RABGGTA-218ENST00000560777 ARHGAP12Q8IWW6 846 aa12.21□□□□□ -0.45
RABGGTA-218ENST00000560777 TP53INP2Q8IXH6 220 aa12.21□□□□□ -0.45
RABGGTA-218ENST00000560777 LRRC57Q8N9N7 239 aa12.21□□□□□ -0.45
RABGGTA-218ENST00000560777 ATP11CQ8NB49 1132 aa12.21□□□□□ -0.45
RABGGTA-218ENST00000560777 OR2T3Q8NH03 318 aa12.21□□□□□ -0.45
RABGGTA-218ENST00000560777 PCDH19Q8TAB3 1148 aa12.21□□□□□ -0.45
RABGGTA-218ENST00000560777 KIAA1524Q8TCG1 905 aa12.21□□□□□ -0.45
RABGGTA-218ENST00000560777 FAF2Q96CS3 445 aa12.21□□□□□ -0.45
RABGGTA-218ENST00000560777 MRGPRX1Q96LB2 322 aa12.21□□□□□ -0.45
RABGGTA-218ENST00000560777 ZNF830Q96NB3 372 aaPredicted RBP12.21□□□□□ -0.45
RABGGTA-218ENST00000560777 ZNF670Q9BS34 389 aa12.21□□□□□ -0.45
RABGGTA-218ENST00000560777 CALN1Q9BXU9 219 aa12.21□□□□□ -0.45
RABGGTA-218ENST00000560777 SLC6A17Q9H1V8 727 aa12.21□□□□□ -0.45
RABGGTA-218ENST00000560777 HPCAL4Q9UM19 191 aa12.21□□□□□ -0.45
RABGGTA-218ENST00000560777 PCDHGA2Q9Y5H1 932 aa12.21□□□□□ -0.45
RABGGTA-218ENST00000560777 R4GN57 208 aa12.21□□□□□ -0.45
RABGGTA-218ENST00000560777 CKAP5Q14008 2032 aa12.2□□□□□ -0.46
RABGGTA-218ENST00000560777 EDDM13A0A1B0GTR0 161 aa12.2□□□□□ -0.46
RABGGTA-218ENST00000560777 LRRD1A4D1F6 860 aa12.2□□□□□ -0.46
RABGGTA-218ENST00000560777 NRDCO43847 1150 aa12.2□□□□□ -0.46
RABGGTA-218ENST00000560777 SIN3BO75182 1162 aa12.2□□□□□ -0.46
RABGGTA-218ENST00000560777 ZNF821O75541 412 aaPredicted RBP12.2□□□□□ -0.46
RABGGTA-218ENST00000560777 NDUFV2P19404 249 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms