RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 FMO5P49326 533 aa7.07□□□□□ -1.28
PRPF40B-214ENST00000551320 CCT8P50990 548 aa7.07□□□□□ -1.28
PRPF40B-214ENST00000551320 CCDC173Q0VFZ6 552 aa7.07□□□□□ -1.28
PRPF40B-214ENST00000551320 EIF4HQ15056 248 aaKnown RBP7.07□□□□□ -1.28
PRPF40B-214ENST00000551320 TCEA2Q15560 299 aa7.07□□□□□ -1.28
PRPF40B-214ENST00000551320 NFIL3Q16649 462 aa7.07□□□□□ -1.28
PRPF40B-214ENST00000551320 HES3Q5TGS1 186 aa7.07□□□□□ -1.28
PRPF40B-214ENST00000551320 TBC1D3GQ6DHY5 549 aa7.07□□□□□ -1.28
PRPF40B-214ENST00000551320 TBC1D3CQ6IPX1 549 aa7.07□□□□□ -1.28
PRPF40B-214ENST00000551320 C14orf80Q86SX3 495 aa7.07□□□□□ -1.28
PRPF40B-214ENST00000551320 CHSY1Q86X52 802 aa7.07□□□□□ -1.28
PRPF40B-214ENST00000551320 TBC1D3Q8IZP1 549 aaPredicted RBP7.07□□□□□ -1.28
PRPF40B-214ENST00000551320 AHI1Q8N157 1196 aa7.07□□□□□ -1.28
PRPF40B-214ENST00000551320 ARHGAP18Q8N392 663 aa7.07□□□□□ -1.28
PRPF40B-214ENST00000551320 ZNF276Q8N554 614 aa7.07□□□□□ -1.28
PRPF40B-214ENST00000551320 NETO2Q8NC67 525 aa7.07□□□□□ -1.28
PRPF40B-214ENST00000551320 LMO3Q8TAP4 145 aa7.07□□□□□ -1.28
PRPF40B-214ENST00000551320 TMEM174Q8WUU8 243 aa7.07□□□□□ -1.28
PRPF40B-214ENST00000551320 PTPRN2Q92932 1015 aa7.07□□□□□ -1.28
PRPF40B-214ENST00000551320 IGSF8Q969P0 613 aa7.07□□□□□ -1.28
PRPF40B-214ENST00000551320 SERAC1Q96JX3 654 aa7.07□□□□□ -1.28
PRPF40B-214ENST00000551320 CNDP2Q96KP4 475 aaKnown RBP7.07□□□□□ -1.28
PRPF40B-214ENST00000551320 NOX5Q96PH1 765 aa7.07□□□□□ -1.28
PRPF40B-214ENST00000551320 OMDQ99983 421 aa7.07□□□□□ -1.28
PRPF40B-214ENST00000551320 CRACR2AQ9BSW2 395 aa7.07□□□□□ -1.28
PRPF40B-214ENST00000551320 SLC2A11Q9BYW1 496 aa7.07□□□□□ -1.28
PRPF40B-214ENST00000551320 UBXN6Q9BZV1 441 aa7.07□□□□□ -1.28
PRPF40B-214ENST00000551320 ZDHHC5Q9C0B5 715 aa7.07□□□□□ -1.28
PRPF40B-214ENST00000551320 OSBPL2Q9H1P3 480 aa7.07□□□□□ -1.28
PRPF40B-214ENST00000551320 RSPH9Q9H1X1 276 aaPredicted RBP7.07□□□□□ -1.28
PRPF40B-214ENST00000551320 PLCB1Q9NQ66 1216 aa7.07□□□□□ -1.28
PRPF40B-214ENST00000551320 ABCC13Q9NSE7 274 aa7.07□□□□□ -1.28
PRPF40B-214ENST00000551320 UCKL1Q9NWZ5 548 aa7.07□□□□□ -1.28
PRPF40B-214ENST00000551320 GMPR2Q9P2T1 348 aaKnown RBP7.07□□□□□ -1.28
PRPF40B-214ENST00000551320 AJAP1Q9UKB5 411 aaPredicted RBP7.07□□□□□ -1.28
PRPF40B-214ENST00000551320 HBS1LQ9Y450 684 aaKnown RBP7.07□□□□□ -1.28
PRPF40B-214ENST00000551320 ACTL7AQ9Y615 435 aa7.07□□□□□ -1.28
PRPF40B-214ENST00000551320 AK5Q9Y6K8 562 aa7.07□□□□□ -1.28
PRPF40B-214ENST00000551320 MYLKQ15746 1914 aa7.07□□□□□ -1.28
PRPF40B-214ENST00000551320 HECTD1Q9ULT8 2610 aa7.07□□□□□ -1.28
PRPF40B-214ENST00000551320 TDRD6O60522 2096 aaKnown RBP7.07□□□□□ -1.28
PRPF40B-214ENST00000551320 SHROOM3Q8TF72 1996 aa7.06□□□□□ -1.28
PRPF40B-214ENST00000551320 FAM237AA0A1B0GTK4 181 aa7.06□□□□□ -1.28
PRPF40B-214ENST00000551320 A0A1W2PPC4 97 aa7.06□□□□□ -1.28
PRPF40B-214ENST00000551320 E5RJQ4 531 aa7.06□□□□□ -1.28
PRPF40B-214ENST00000551320 TRIM38O00635 465 aa7.06□□□□□ -1.28
PRPF40B-214ENST00000551320 PAPSS1O43252 624 aaPredicted RBP7.06□□□□□ -1.28
PRPF40B-214ENST00000551320 TIMM44O43615 452 aa7.06□□□□□ -1.28
PRPF40B-214ENST00000551320 MAN1A2O60476 641 aa7.06□□□□□ -1.28
PRPF40B-214ENST00000551320 LETM1O95202 739 aaPredicted RBP7.06□□□□□ -1.28
PRPF40B-214ENST00000551320 LDOC1O95751 146 aaPredicted RBP7.06□□□□□ -1.28
PRPF40B-214ENST00000551320 MT-CO1P00395 513 aa7.06□□□□□ -1.28
PRPF40B-214ENST00000551320 ATP5BP06576 529 aaKnown RBP7.06□□□□□ -1.28
PRPF40B-214ENST00000551320 ITGAVP06756 1048 aa7.06□□□□□ -1.28
PRPF40B-214ENST00000551320 JUPP14923 745 aa7.06□□□□□ -1.28
PRPF40B-214ENST00000551320 TRIM21P19474 475 aaKnown RBP7.06□□□□□ -1.28
PRPF40B-214ENST00000551320 TACR2P21452 398 aa7.06□□□□□ -1.28
PRPF40B-214ENST00000551320 GLDCP23378 1020 aa7.06□□□□□ -1.28
PRPF40B-214ENST00000551320 DRD3P35462 400 aa7.06□□□□□ -1.28
PRPF40B-214ENST00000551320 GRK6P43250 576 aa7.06□□□□□ -1.28
PRPF40B-214ENST00000551320 GRIA4P48058 902 aa7.06□□□□□ -1.28
PRPF40B-214ENST00000551320 SLC11A2P49281 568 aa7.06□□□□□ -1.28
PRPF40B-214ENST00000551320 ADPRHP54922 357 aa7.06□□□□□ -1.28
PRPF40B-214ENST00000551320 SLC8A3P57103 927 aa7.06□□□□□ -1.28
PRPF40B-214ENST00000551320 CLDN2P57739 230 aa7.06□□□□□ -1.28
PRPF40B-214ENST00000551320 ST8SIA6P61647 398 aa7.06□□□□□ -1.28
PRPF40B-214ENST00000551320 KRT85P78386 507 aa7.06□□□□□ -1.28
PRPF40B-214ENST00000551320 CDH18Q13634 790 aa7.06□□□□□ -1.28
PRPF40B-214ENST00000551320 SMAD1Q15797 465 aaKnown RBP7.06□□□□□ -1.28
PRPF40B-214ENST00000551320 HNRNPA1L2Q32P51 320 aaKnown RBP7.06□□□□□ -1.28
PRPF40B-214ENST00000551320 EDRF1Q3B7T1 1238 aa7.06□□□□□ -1.28
PRPF40B-214ENST00000551320 ACCSLQ4AC99 568 aa7.06□□□□□ -1.28
PRPF40B-214ENST00000551320 CCDC40Q4G0X9 1142 aa7.06□□□□□ -1.28
PRPF40B-214ENST00000551320 C2CD6Q53TS8 623 aa7.06□□□□□ -1.28
PRPF40B-214ENST00000551320 MS4A13Q5J8X5 152 aa7.06□□□□□ -1.28
PRPF40B-214ENST00000551320 MSANTD2Q6P1R3 559 aa7.06□□□□□ -1.28
PRPF40B-214ENST00000551320 IL27RAQ6UWB1 636 aa7.06□□□□□ -1.28
PRPF40B-214ENST00000551320 LCLAT1Q6UWP7 414 aa7.06□□□□□ -1.28
PRPF40B-214ENST00000551320 TMC6Q7Z403 805 aa7.06□□□□□ -1.28
PRPF40B-214ENST00000551320 CREBRFQ8IUR6 639 aa7.06□□□□□ -1.28
PRPF40B-214ENST00000551320 FMR1NBQ8N0W7 255 aaPredicted RBP7.06□□□□□ -1.28
PRPF40B-214ENST00000551320 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.06□□□□□ -1.28
PRPF40B-214ENST00000551320 FIBINQ8TAL6 211 aa7.06□□□□□ -1.28
PRPF40B-214ENST00000551320 SAP25Q8TEE9 199 aa7.06□□□□□ -1.28
PRPF40B-214ENST00000551320 WFIKKN2Q8TEU8 576 aa7.06□□□□□ -1.28
PRPF40B-214ENST00000551320 CCDC47Q96A33 483 aaKnown RBP7.06□□□□□ -1.28
PRPF40B-214ENST00000551320 TTC17Q96AE7 1141 aa7.06□□□□□ -1.28
PRPF40B-214ENST00000551320 CDK5RAP1Q96SZ6 601 aaKnown RBP7.06□□□□□ -1.28
PRPF40B-214ENST00000551320 ELF4Q99607 663 aaPredicted RBP7.06□□□□□ -1.28
PRPF40B-214ENST00000551320 CDC6Q99741 560 aa7.06□□□□□ -1.28
PRPF40B-214ENST00000551320 ACE2Q9BYF1 805 aaPredicted RBP7.06□□□□□ -1.28
PRPF40B-214ENST00000551320 GTPBP4Q9BZE4 634 aaKnown RBP7.06□□□□□ -1.28
PRPF40B-214ENST00000551320 ANLNQ9NQW6 1124 aa7.06□□□□□ -1.28
PRPF40B-214ENST00000551320 OLA1Q9NTK5 396 aaKnown RBP7.06□□□□□ -1.28
PRPF40B-214ENST00000551320 KIAA1522Q9P206 1035 aaPredicted RBP7.06□□□□□ -1.28
PRPF40B-214ENST00000551320 ARHGAP20Q9P2F6 1191 aa7.06□□□□□ -1.28
PRPF40B-214ENST00000551320 SEPT3Q9UH03 358 aa7.06□□□□□ -1.28
PRPF40B-214ENST00000551320 ARMCX3Q9UH62 379 aaPredicted RBP7.06□□□□□ -1.28
PRPF40B-214ENST00000551320 STOML2Q9UJZ1 356 aa7.06□□□□□ -1.28
PRPF40B-214ENST00000551320 MAN1B1Q9UKM7 699 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms