RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 CACNB3P54284 484 aa0.91□□□□□ -2.26
COPB1-212ENST00000534771 DRG2P55039 364 aaKnown RBP0.91□□□□□ -2.26
COPB1-212ENST00000534771 AMPD3Q01432 767 aa0.91□□□□□ -2.26
COPB1-212ENST00000534771 PLK5Q496M5 336 aa0.91□□□□□ -2.26
COPB1-212ENST00000534771 FAXCQ5TGI0 409 aa0.91□□□□□ -2.26
COPB1-212ENST00000534771 RRAGBQ5VZM2 374 aa0.91□□□□□ -2.26
COPB1-212ENST00000534771 MRNIPQ6NTE8 343 aa0.91□□□□□ -2.26
COPB1-212ENST00000534771 TMEM88Q6PEY1 159 aa0.91□□□□□ -2.26
COPB1-212ENST00000534771 APOA5Q6Q788 366 aa0.91□□□□□ -2.26
COPB1-212ENST00000534771 USP17L6PQ6QN14 398 aa0.91□□□□□ -2.26
COPB1-212ENST00000534771 ZNF497Q6ZNH5 498 aa0.91□□□□□ -2.26
COPB1-212ENST00000534771 STXBP4Q6ZWJ1 553 aa0.91□□□□□ -2.26
COPB1-212ENST00000534771 OVCH2Q7RTZ1 564 aa0.91□□□□□ -2.26
COPB1-212ENST00000534771 CCDC25Q86WR0 208 aa0.91□□□□□ -2.26
COPB1-212ENST00000534771 KIAA0319LQ8IZA0 1049 aa0.91□□□□□ -2.26
COPB1-212ENST00000534771 PGBD5Q8N414 524 aa0.91□□□□□ -2.26
COPB1-212ENST00000534771 HORMAD2Q8N7B1 307 aa0.91□□□□□ -2.26
COPB1-212ENST00000534771 TEX45Q8NA69 505 aa0.91□□□□□ -2.26
COPB1-212ENST00000534771 NEXN-AS1Q8NBZ9 246 aa0.91□□□□□ -2.26
COPB1-212ENST00000534771 ZBTB34Q8NCN2 500 aa0.91□□□□□ -2.26
COPB1-212ENST00000534771 CEP76Q8TAP6 659 aa0.91□□□□□ -2.26
COPB1-212ENST00000534771 TMEM163Q8TC26 289 aa0.91□□□□□ -2.26
COPB1-212ENST00000534771 GRAMD1AQ96CP6 724 aa0.91□□□□□ -2.26
COPB1-212ENST00000534771 HOOK2Q96ED9 719 aa0.91□□□□□ -2.26
COPB1-212ENST00000534771 APIPQ96GX9 242 aa0.91□□□□□ -2.26
COPB1-212ENST00000534771 TXNDC15Q96J42 360 aa0.91□□□□□ -2.26
COPB1-212ENST00000534771 FAR2Q96K12 515 aa0.91□□□□□ -2.26
COPB1-212ENST00000534771 MSLNLQ96KJ4 702 aa0.91□□□□□ -2.26
COPB1-212ENST00000534771 ZNF385AQ96PM9 386 aaKnown RBP0.91□□□□□ -2.26
COPB1-212ENST00000534771 TMEM60Q9H2L4 133 aa0.91□□□□□ -2.26
COPB1-212ENST00000534771 AS3MTQ9HBK9 375 aa0.91□□□□□ -2.26
COPB1-212ENST00000534771 ZFP57Q9NU63 452 aa0.91□□□□□ -2.26
COPB1-212ENST00000534771 ZDHHC7Q9NXF8 308 aa0.91□□□□□ -2.26
COPB1-212ENST00000534771 FBXO4Q9UKT5 387 aa0.91□□□□□ -2.26
COPB1-212ENST00000534771 SLC45A1Q9Y2W3 748 aa0.91□□□□□ -2.26
COPB1-212ENST00000534771 UBE2J1Q9Y385 318 aaPredicted RBP0.91□□□□□ -2.26
COPB1-212ENST00000534771 DOCK7Q96N67 2140 aa0.91□□□□□ -2.26
COPB1-212ENST00000534771 CKAP5Q14008 2032 aa0.9□□□□□ -2.27
COPB1-212ENST00000534771 CYP3A7-CYP3A51PA0A087WV96 503 aa0.9□□□□□ -2.27
COPB1-212ENST00000534771 OR2W5A6NFC9 320 aa0.9□□□□□ -2.27
COPB1-212ENST00000534771 C3orf70A6NLC5 250 aaPredicted RBP0.9□□□□□ -2.27
COPB1-212ENST00000534771 HNRNPCL2B2RXH8 293 aa0.9□□□□□ -2.27
COPB1-212ENST00000534771 RASA4BC9J798 803 aa0.9□□□□□ -2.27
COPB1-212ENST00000534771 C16orf97H3BN30 126 aa0.9□□□□□ -2.27
COPB1-212ENST00000534771 RTL8CO15255 209 aa0.9□□□□□ -2.27
COPB1-212ENST00000534771 THAP12O43422 761 aa0.9□□□□□ -2.27
COPB1-212ENST00000534771 KIF1CO43896 1103 aaKnown RBP0.9□□□□□ -2.27
COPB1-212ENST00000534771 CRLF1O75462 422 aa0.9□□□□□ -2.27
COPB1-212ENST00000534771 PMS2P2O95744 297 aa0.9□□□□□ -2.27
COPB1-212ENST00000534771 AFPP02771 609 aaKnown RBP0.9□□□□□ -2.27
COPB1-212ENST00000534771 ALDOAP04075 364 aaKnown RBP0.9□□□□□ -2.27
COPB1-212ENST00000534771 WEE2P0C1S8 567 aa0.9□□□□□ -2.27
COPB1-212ENST00000534771 FGF5P12034 268 aa0.9□□□□□ -2.27
COPB1-212ENST00000534771 IGFBP2P18065 325 aa0.9□□□□□ -2.27
COPB1-212ENST00000534771 SP100P23497 879 aaPredicted RBP0.9□□□□□ -2.27
COPB1-212ENST00000534771 CYP3A7P24462 503 aa0.9□□□□□ -2.27
COPB1-212ENST00000534771 ALDH4A1P30038 563 aa0.9□□□□□ -2.27
COPB1-212ENST00000534771 SLC5A2P31639 672 aa0.9□□□□□ -2.27
COPB1-212ENST00000534771 TIMP3P35625 211 aa0.9□□□□□ -2.27
COPB1-212ENST00000534771 NEK2P51955 445 aa0.9□□□□□ -2.27
COPB1-212ENST00000534771 DSCR10P59022 87 aa0.9□□□□□ -2.27
COPB1-212ENST00000534771 NLRP5P59047 1200 aa0.9□□□□□ -2.27
COPB1-212ENST00000534771 LMO4P61968 165 aa0.9□□□□□ -2.27
COPB1-212ENST00000534771 RHAGQ02094 409 aa0.9□□□□□ -2.27
COPB1-212ENST00000534771 ZBTB16Q05516 673 aa0.9□□□□□ -2.27
COPB1-212ENST00000534771 PPIGQ13427 754 aaKnown RBP eCLIP0.9□□□□□ -2.273e-7■□□□□ 8.2
COPB1-212ENST00000534771 ATP1A4Q13733 1029 aa0.9□□□□□ -2.27
COPB1-212ENST00000534771 MYBPC2Q14324 1141 aa0.9□□□□□ -2.27
COPB1-212ENST00000534771 CSHL1Q14406 222 aa0.9□□□□□ -2.27
COPB1-212ENST00000534771 LPAL2Q16609 132 aa0.9□□□□□ -2.27
COPB1-212ENST00000534771 SYT16Q17RD7 645 aa0.9□□□□□ -2.27
COPB1-212ENST00000534771 ZNF484Q5JVG2 852 aa0.9□□□□□ -2.27
COPB1-212ENST00000534771 ZC2HC1BQ5TFG8 222 aa0.9□□□□□ -2.27
COPB1-212ENST00000534771 VWA5B1Q5TIE3 1220 aa0.9□□□□□ -2.27
COPB1-212ENST00000534771 RNF220Q5VTB9 566 aa0.9□□□□□ -2.27
COPB1-212ENST00000534771 TYW3Q6IPR3 259 aaKnown RBP0.9□□□□□ -2.27
COPB1-212ENST00000534771 CYB5RLQ6IPT4 315 aa0.9□□□□□ -2.27
COPB1-212ENST00000534771 C19orf48Q6RUI8 117 aa0.9□□□□□ -2.27
COPB1-212ENST00000534771 CRTC1Q6UUV9 634 aa0.9□□□□□ -2.27
COPB1-212ENST00000534771 NEK10Q6ZWH5 1172 aa0.9□□□□□ -2.27
COPB1-212ENST00000534771 MDGA2Q7Z553 956 aa0.9□□□□□ -2.27
COPB1-212ENST00000534771 TTC30AQ86WT1 665 aa0.9□□□□□ -2.27
COPB1-212ENST00000534771 TMEM217Q8N7C4 229 aa0.9□□□□□ -2.27
COPB1-212ENST00000534771 CCDC150Q8NCX0 1101 aa0.9□□□□□ -2.27
COPB1-212ENST00000534771 ZNF248Q8NDW4 579 aa0.9□□□□□ -2.27
COPB1-212ENST00000534771 CADM4Q8NFZ8 388 aa0.9□□□□□ -2.27
COPB1-212ENST00000534771 SLC22A17Q8WUG5 538 aa0.9□□□□□ -2.27
COPB1-212ENST00000534771 NPIPB3Q92617 1050 aa0.9□□□□□ -2.27
COPB1-212ENST00000534771 ZNF524Q96C55 264 aa0.9□□□□□ -2.27
COPB1-212ENST00000534771 ZNF501Q96CX3 271 aaPredicted RBP0.9□□□□□ -2.27
COPB1-212ENST00000534771 MTBPQ96DY7 904 aa0.9□□□□□ -2.27
COPB1-212ENST00000534771 LRRC46Q96FV0 321 aa0.9□□□□□ -2.27
COPB1-212ENST00000534771 ZNF599Q96NL3 588 aa0.9□□□□□ -2.27
COPB1-212ENST00000534771 F2RL3Q96RI0 385 aa0.9□□□□□ -2.27
COPB1-212ENST00000534771 STRBPQ96SI9 672 aaKnown RBP0.9□□□□□ -2.27
COPB1-212ENST00000534771 EGFL8Q99944 293 aa0.9□□□□□ -2.27
COPB1-212ENST00000534771 PAAF1Q9BRP4 392 aa0.9□□□□□ -2.27
COPB1-212ENST00000534771 KRTAP4-1Q9BYQ7 146 aa0.9□□□□□ -2.27
COPB1-212ENST00000534771 HIPK3Q9H422 1215 aa0.9□□□□□ -2.27
COPB1-212ENST00000534771 ACTR5Q9H9F9 607 aaPredicted RBP0.9□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms