RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 SRSF5Q13243 272 aaKnown RBP13.86□□□□□ -0.19
COL1A1-208ENST00000494334 DPYSQ14117 519 aa13.86□□□□□ -0.19
COL1A1-208ENST00000494334 LINGO4Q6UY18 593 aa13.86□□□□□ -0.19
COL1A1-208ENST00000494334 TMPRSS6Q8IU80 811 aa13.86□□□□□ -0.19
COL1A1-208ENST00000494334 SH2D3CQ8N5H7 860 aa13.86□□□□□ -0.19
COL1A1-208ENST00000494334 FRS2Q8WU20 508 aa13.86□□□□□ -0.19
COL1A1-208ENST00000494334 PTPRN2Q92932 1015 aa13.86□□□□□ -0.19
COL1A1-208ENST00000494334 MRGPRX1Q96LB2 322 aa13.86□□□□□ -0.19
COL1A1-208ENST00000494334 CSPG4P5Q96PW8 444 aa13.86□□□□□ -0.19
COL1A1-208ENST00000494334 DESI2Q9BSY9 194 aa13.86□□□□□ -0.19
COL1A1-208ENST00000494334 KLC2Q9H0B6 622 aa13.86□□□□□ -0.19
COL1A1-208ENST00000494334 DONSONQ9NYP3 566 aa13.86□□□□□ -0.19
COL1A1-208ENST00000494334 HS3ST2Q9Y278 367 aa13.86□□□□□ -0.19
COL1A1-208ENST00000494334 HYOU1Q9Y4L1 999 aa13.86□□□□□ -0.19
COL1A1-208ENST00000494334 ALG6Q9Y672 507 aa13.86□□□□□ -0.19
COL1A1-208ENST00000494334 DOCK4Q8N1I0 1966 aa13.85□□□□□ -0.19
COL1A1-208ENST00000494334 TARSL2A2RTX5 802 aaKnown RBP13.85□□□□□ -0.19
COL1A1-208ENST00000494334 BTNL10A8MVZ5 291 aa13.85□□□□□ -0.19
COL1A1-208ENST00000494334 RASA4BC9J798 803 aa13.85□□□□□ -0.19
COL1A1-208ENST00000494334 H3BRJ5 948 aa13.85□□□□□ -0.19
COL1A1-208ENST00000494334 ZBTB24O43167 697 aaPredicted RBP13.85□□□□□ -0.19
COL1A1-208ENST00000494334 RASA4O43374 803 aa13.85□□□□□ -0.19
COL1A1-208ENST00000494334 BUB1O43683 1085 aa13.85□□□□□ -0.19
COL1A1-208ENST00000494334 BUB1BO60566 1050 aaPredicted RBP13.85□□□□□ -0.19
COL1A1-208ENST00000494334 SIN3BO75182 1162 aa13.85□□□□□ -0.19
COL1A1-208ENST00000494334 CD160O95971 181 aa13.85□□□□□ -0.19
COL1A1-208ENST00000494334 SRCP12931 536 aa13.85□□□□□ -0.19
COL1A1-208ENST00000494334 COMTP21964 271 aa13.85□□□□□ -0.19
COL1A1-208ENST00000494334 AMPD1P23109 780 aa13.85□□□□□ -0.19
COL1A1-208ENST00000494334 KRT81Q14533 505 aa13.85□□□□□ -0.19
COL1A1-208ENST00000494334 DLG2Q15700 870 aa13.85□□□□□ -0.19
COL1A1-208ENST00000494334 ACCSLQ4AC99 568 aa13.85□□□□□ -0.19
COL1A1-208ENST00000494334 C9orf64Q5T6V5 341 aa13.85□□□□□ -0.19
COL1A1-208ENST00000494334 RETSATQ6NUM9 610 aa13.85□□□□□ -0.19
COL1A1-208ENST00000494334 ATP11CQ8NB49 1132 aa13.85□□□□□ -0.19
COL1A1-208ENST00000494334 KCTD6Q8NC69 237 aa13.85□□□□□ -0.19
COL1A1-208ENST00000494334 CCDC112Q8NEF3 446 aa13.85□□□□□ -0.19
COL1A1-208ENST00000494334 OR2T3Q8NH03 318 aa13.85□□□□□ -0.19
COL1A1-208ENST00000494334 TSC1Q92574 1164 aa13.85□□□□□ -0.19
COL1A1-208ENST00000494334 CELF6Q96J87 481 aaKnown RBP13.85□□□□□ -0.19
COL1A1-208ENST00000494334 SLC39A8Q9C0K1 460 aa13.85□□□□□ -0.19
COL1A1-208ENST00000494334 GOLPH3Q9H4A6 298 aa13.85□□□□□ -0.19
COL1A1-208ENST00000494334 LRRC19Q9H756 370 aa13.85□□□□□ -0.19
COL1A1-208ENST00000494334 ETNK2Q9NVF9 386 aa13.85□□□□□ -0.19
COL1A1-208ENST00000494334 ACTL7AQ9Y615 435 aa13.85□□□□□ -0.19
COL1A1-208ENST00000494334 MUC22E2RYF6 1773 aaPredicted RBP13.85□□□□□ -0.19
COL1A1-208ENST00000494334 A0A0U1RQJ8 604 aa13.84□□□□□ -0.19
COL1A1-208ENST00000494334 EDDM13A0A1B0GTR0 161 aa13.84□□□□□ -0.19
COL1A1-208ENST00000494334 CXorf51AA0A1B0GTR3 108 aa13.84□□□□□ -0.19
COL1A1-208ENST00000494334 PROB1E7EW31 1015 aa13.84□□□□□ -0.19
COL1A1-208ENST00000494334 K7ERQ8 282 aa13.84□□□□□ -0.19
COL1A1-208ENST00000494334 DCLK1O15075 740 aa13.84□□□□□ -0.19
COL1A1-208ENST00000494334 ARHGAP6O43182 974 aa13.84□□□□□ -0.19
COL1A1-208ENST00000494334 SMAD6O43541 496 aaKnown RBP13.84□□□□□ -0.19
COL1A1-208ENST00000494334 KDELR3O43731 214 aa13.84□□□□□ -0.19
COL1A1-208ENST00000494334 C7P10643 843 aa13.84□□□□□ -0.19
COL1A1-208ENST00000494334 VAV1P15498 845 aa13.84□□□□□ -0.19
COL1A1-208ENST00000494334 NDST2P52849 883 aa13.84□□□□□ -0.19
COL1A1-208ENST00000494334 SLC20A2Q08357 652 aa13.84□□□□□ -0.19
COL1A1-208ENST00000494334 MMRN1Q13201 1228 aa13.84□□□□□ -0.19
COL1A1-208ENST00000494334 DPYSL3Q14195 570 aa13.84□□□□□ -0.19
COL1A1-208ENST00000494334 PDK2Q15119 407 aa13.84□□□□□ -0.19
COL1A1-208ENST00000494334 PARP15Q460N3 678 aa13.84□□□□□ -0.19
COL1A1-208ENST00000494334 USP39Q53GS9 565 aaKnown RBP13.84□□□□□ -0.19
COL1A1-208ENST00000494334 LRRC38Q5VT99 294 aa13.84□□□□□ -0.19
COL1A1-208ENST00000494334 AFMIDQ63HM1 303 aa13.84□□□□□ -0.19
COL1A1-208ENST00000494334 KIAA1328Q86T90 577 aa13.84□□□□□ -0.19
COL1A1-208ENST00000494334 ZNF354CQ86Y25 554 aa13.84□□□□□ -0.19
COL1A1-208ENST00000494334 ARHGAP12Q8IWW6 846 aa13.84□□□□□ -0.19
COL1A1-208ENST00000494334 NPWQ8N729 165 aa13.84□□□□□ -0.19
COL1A1-208ENST00000494334 TPCN2Q8NHX9 752 aa13.84□□□□□ -0.19
COL1A1-208ENST00000494334 GAB3Q8WWW8 586 aa13.84□□□□□ -0.19
COL1A1-208ENST00000494334 RLN3Q8WXF3 142 aa13.84□□□□□ -0.19
COL1A1-208ENST00000494334 RAPGEF5Q92565 580 aa13.84□□□□□ -0.19
COL1A1-208ENST00000494334 PRCCQ92733 491 aaPredicted RBP13.84□□□□□ -0.19
COL1A1-208ENST00000494334 SIPA1Q96FS4 1042 aa13.84□□□□□ -0.19
COL1A1-208ENST00000494334 HMCESQ96FZ2 354 aa13.84□□□□□ -0.19
COL1A1-208ENST00000494334 FAM129BQ96TA1 746 aa13.84□□□□□ -0.19
COL1A1-208ENST00000494334 PRDM16Q9HAZ2 1276 aa13.84□□□□□ -0.19
COL1A1-208ENST00000494334 KLHL11Q9NVR0 708 aa13.84□□□□□ -0.19
COL1A1-208ENST00000494334 RCOR3Q9P2K3 495 aaPredicted RBP13.84□□□□□ -0.19
COL1A1-208ENST00000494334 HPCAL4Q9UM19 191 aa13.84□□□□□ -0.19
COL1A1-208ENST00000494334 INVSQ9Y283 1065 aa13.84□□□□□ -0.19
COL1A1-208ENST00000494334 MFHAS1Q9Y4C4 1052 aa13.84□□□□□ -0.19
COL1A1-208ENST00000494334 DMDP11532 3685 aa13.84□□□□□ -0.19
COL1A1-208ENST00000494334 MYO15AQ9UKN7 3530 aa13.84□□□□□ -0.19
COL1A1-208ENST00000494334 SPOPO43791 374 aa13.83□□□□□ -0.2
COL1A1-208ENST00000494334 RPP40O75818 363 aaKnown RBP13.83□□□□□ -0.2
COL1A1-208ENST00000494334 TNNT1P13805 278 aa13.83□□□□□ -0.2
COL1A1-208ENST00000494334 KDELR1P24390 212 aa13.83□□□□□ -0.2
COL1A1-208ENST00000494334 P2RY2P41231 377 aa13.83□□□□□ -0.2
COL1A1-208ENST00000494334 SERPINH1P50454 418 aaKnown RBP13.83□□□□□ -0.2
COL1A1-208ENST00000494334 CLCN6P51797 869 aa13.83□□□□□ -0.2
COL1A1-208ENST00000494334 NAP1L1P55209 391 aaKnown RBP13.83□□□□□ -0.2
COL1A1-208ENST00000494334 RPS14P62263 151 aaKnown RBP13.83□□□□□ -0.2
COL1A1-208ENST00000494334 CCZ1BP86790 482 aa13.83□□□□□ -0.2
COL1A1-208ENST00000494334 CCZ1P86791 482 aaPredicted RBP13.83□□□□□ -0.2
COL1A1-208ENST00000494334 KIF5AQ12840 1032 aa13.83□□□□□ -0.2
COL1A1-208ENST00000494334 SERINC3Q13530 473 aa13.83□□□□□ -0.2
COL1A1-208ENST00000494334 SIM2Q14190 667 aaPredicted RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms