RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 TCAF2A6NFQ2 919 aa18.52■□□□□ 0.56
CHCHD3-203ENST00000448878 PYCARD-AS1I3L0S3 204 aa18.52■□□□□ 0.56
CHCHD3-203ENST00000448878 MCF2LO15068 1137 aa18.52■□□□□ 0.56
CHCHD3-203ENST00000448878 PCDH8O95206 1070 aa18.52■□□□□ 0.56
CHCHD3-203ENST00000448878 CKMT1AP12532 417 aa18.52■□□□□ 0.56
CHCHD3-203ENST00000448878 KRT5P13647 590 aa18.52■□□□□ 0.56
CHCHD3-203ENST00000448878 AKT2P31751 481 aa18.52■□□□□ 0.56
CHCHD3-203ENST00000448878 DUSP3P51452 185 aaPredicted RBP18.52■□□□□ 0.56
CHCHD3-203ENST00000448878 PMS1P54277 932 aaKnown RBP18.52■□□□□ 0.56
CHCHD3-203ENST00000448878 ZNF177Q13360 481 aaPredicted RBP18.52■□□□□ 0.56
CHCHD3-203ENST00000448878 CCDC40Q4G0X9 1142 aa18.52■□□□□ 0.56
CHCHD3-203ENST00000448878 ZNF542PQ5EBM4 170 aa18.52■□□□□ 0.56
CHCHD3-203ENST00000448878 APOLD1Q96LR9 279 aa18.52■□□□□ 0.56
CHCHD3-203ENST00000448878 CAAP1Q9H8G2 361 aa18.52■□□□□ 0.56
CHCHD3-203ENST00000448878 FAM204AQ9H8W3 233 aa18.52■□□□□ 0.56
CHCHD3-203ENST00000448878 POLR1BQ9H9Y6 1135 aa18.52■□□□□ 0.56
CHCHD3-203ENST00000448878 DYRK4Q9NR20 520 aa18.52■□□□□ 0.56
CHCHD3-203ENST00000448878 EVA1BQ9NVM1 165 aa18.52■□□□□ 0.56
CHCHD3-203ENST00000448878 DNAJC28Q9NX36 388 aa18.52■□□□□ 0.56
CHCHD3-203ENST00000448878 PPM1HQ9ULR3 514 aa18.52■□□□□ 0.56
CHCHD3-203ENST00000448878 FLNBO75369 2602 aaKnown RBP18.52■□□□□ 0.55
CHCHD3-203ENST00000448878 ASH1LQ9NR48 2969 aaKnown RBP18.51■□□□□ 0.55
CHCHD3-203ENST00000448878 FAM237AA0A1B0GTK4 181 aa18.51■□□□□ 0.55
CHCHD3-203ENST00000448878 NEMP2A6NFY4 417 aa18.51■□□□□ 0.55
CHCHD3-203ENST00000448878 KPNA3O00505 521 aaPredicted RBP18.51■□□□□ 0.55
CHCHD3-203ENST00000448878 ATP9BO43861 1147 aa18.51■□□□□ 0.55
CHCHD3-203ENST00000448878 PIAS2O75928 621 aa18.51■□□□□ 0.55
CHCHD3-203ENST00000448878 GPD2P43304 727 aa18.51■□□□□ 0.55
CHCHD3-203ENST00000448878 PLK1P53350 603 aa18.51■□□□□ 0.55
CHCHD3-203ENST00000448878 CLDN2P57739 230 aa18.51■□□□□ 0.55
CHCHD3-203ENST00000448878 YWHAZP63104 245 aaKnown RBP18.51■□□□□ 0.55
CHCHD3-203ENST00000448878 PITX1P78337 314 aaPredicted RBP18.51■□□□□ 0.55
CHCHD3-203ENST00000448878 CCDC15Q0P6D6 951 aa18.51■□□□□ 0.55
CHCHD3-203ENST00000448878 C3orf38Q5JPI3 329 aa18.51■□□□□ 0.55
CHCHD3-203ENST00000448878 ZNF658Q5TYW1 1059 aaPredicted RBP18.51■□□□□ 0.55
CHCHD3-203ENST00000448878 TTC39BQ5VTQ0 682 aaPredicted RBP18.51■□□□□ 0.55
CHCHD3-203ENST00000448878 DENND1BQ6P3S1 775 aa18.51■□□□□ 0.55
CHCHD3-203ENST00000448878 OR13H1Q8NG92 308 aa18.51■□□□□ 0.55
CHCHD3-203ENST00000448878 MAPK15Q8TD08 544 aa18.51■□□□□ 0.55
CHCHD3-203ENST00000448878 FAM131CQ96AQ9 280 aa18.51■□□□□ 0.55
CHCHD3-203ENST00000448878 HIC2Q96JB3 615 aa18.51■□□□□ 0.55
CHCHD3-203ENST00000448878 MED15Q96RN5 788 aa18.51■□□□□ 0.55
CHCHD3-203ENST00000448878 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.51■□□□□ 0.55
CHCHD3-203ENST00000448878 MUC3BQ9H195 1237 aa18.51■□□□□ 0.55
CHCHD3-203ENST00000448878 METTL14Q9HCE5 456 aaKnown RBP18.51■□□□□ 0.55
CHCHD3-203ENST00000448878 THSD1Q9NS62 852 aa18.51■□□□□ 0.55
CHCHD3-203ENST00000448878 E5RJQ4 531 aa18.5■□□□□ 0.55
CHCHD3-203ENST00000448878 ALOX15BO15296 676 aa18.5■□□□□ 0.55
CHCHD3-203ENST00000448878 SLC2A3P11169 496 aa18.5■□□□□ 0.55
CHCHD3-203ENST00000448878 HNRNPA2B1P22626 353 aaKnown RBP18.5■□□□□ 0.55
CHCHD3-203ENST00000448878 RBMS1P29558 406 aaKnown RBP18.5■□□□□ 0.55
CHCHD3-203ENST00000448878 LSSP48449 732 aa18.5■□□□□ 0.55
CHCHD3-203ENST00000448878 TAS2R38P59533 333 aa18.5■□□□□ 0.55
CHCHD3-203ENST00000448878 ERVPABLB-1P60509 514 aa18.5■□□□□ 0.55
CHCHD3-203ENST00000448878 CDK17Q00537 523 aa18.5■□□□□ 0.55
CHCHD3-203ENST00000448878 CENPCQ03188 943 aa18.5■□□□□ 0.55
CHCHD3-203ENST00000448878 CDCP2Q5VXM1 449 aa18.5■□□□□ 0.55
CHCHD3-203ENST00000448878 CXorf57Q6NSI4 855 aaKnown RBP18.5■□□□□ 0.55
CHCHD3-203ENST00000448878 FBXL22Q6P050 247 aa18.5■□□□□ 0.55
CHCHD3-203ENST00000448878 FOXR1Q6PIV2 292 aa18.5■□□□□ 0.55
CHCHD3-203ENST00000448878 ARHGEF19Q8IW93 802 aa18.5■□□□□ 0.55
CHCHD3-203ENST00000448878 FAM181AQ8N9Y4 354 aa18.5■□□□□ 0.55
CHCHD3-203ENST00000448878 ATP11CQ8NB49 1132 aa18.5■□□□□ 0.55
CHCHD3-203ENST00000448878 IFI44Q8TCB0 444 aa18.5■□□□□ 0.55
CHCHD3-203ENST00000448878 VCPIP1Q96JH7 1222 aa18.5■□□□□ 0.55
CHCHD3-203ENST00000448878 CCDC114Q96M63 670 aa18.5■□□□□ 0.55
CHCHD3-203ENST00000448878 FEM1AQ9BSK4 669 aa18.5■□□□□ 0.55
CHCHD3-203ENST00000448878 SEMA4CQ9C0C4 833 aa18.5■□□□□ 0.55
CHCHD3-203ENST00000448878 DDIT4Q9NX09 232 aa18.5■□□□□ 0.55
CHCHD3-203ENST00000448878 VANGL2Q9ULK5 521 aa18.5■□□□□ 0.55
CHCHD3-203ENST00000448878 PTPRQQ9UMZ3 2332 aa18.5■□□□□ 0.55
CHCHD3-203ENST00000448878 DOCK9Q9BZ29 2069 aa18.5■□□□□ 0.55
CHCHD3-203ENST00000448878 CPED1A4D0V7 1026 aa18.49■□□□□ 0.55
CHCHD3-203ENST00000448878 MED7O43513 233 aa18.49■□□□□ 0.55
CHCHD3-203ENST00000448878 NEBLO76041 1014 aa18.49■□□□□ 0.55
CHCHD3-203ENST00000448878 LETM1O95202 739 aaPredicted RBP18.49■□□□□ 0.55
CHCHD3-203ENST00000448878 CCR1P32246 355 aa18.49■□□□□ 0.55
CHCHD3-203ENST00000448878 VAC14Q08AM6 782 aa18.49■□□□□ 0.55
CHCHD3-203ENST00000448878 MAPK8IP2Q13387 824 aaPredicted RBP18.49■□□□□ 0.55
CHCHD3-203ENST00000448878 BEND5Q7L4P6 421 aa18.49■□□□□ 0.55
CHCHD3-203ENST00000448878 PTAR1Q7Z6K3 402 aaPredicted RBP18.49■□□□□ 0.55
CHCHD3-203ENST00000448878 HORMAD1Q86X24 394 aa18.49■□□□□ 0.55
CHCHD3-203ENST00000448878 SH2D3CQ8N5H7 860 aa18.49■□□□□ 0.55
CHCHD3-203ENST00000448878 TMEM145Q8NBT3 493 aa18.49■□□□□ 0.55
CHCHD3-203ENST00000448878 WBP1Q96G27 269 aa18.49■□□□□ 0.55
CHCHD3-203ENST00000448878 NOX5Q96PH1 765 aa18.49■□□□□ 0.55
CHCHD3-203ENST00000448878 PRMT1Q99873 361 aaKnown RBP18.49■□□□□ 0.55
CHCHD3-203ENST00000448878 DUSP23Q9BVJ7 150 aa18.49■□□□□ 0.55
CHCHD3-203ENST00000448878 DPH1Q9BZG8 443 aa18.49■□□□□ 0.55
CHCHD3-203ENST00000448878 THAP9Q9H5L6 903 aa18.49■□□□□ 0.55
CHCHD3-203ENST00000448878 NLGN3Q9NZ94 848 aa18.49■□□□□ 0.55
CHCHD3-203ENST00000448878 SATB2Q9UPW6 733 aa18.49■□□□□ 0.55
CHCHD3-203ENST00000448878 TDRD6O60522 2096 aaKnown RBP18.49■□□□□ 0.55
CHCHD3-203ENST00000448878 A0A1W2PQ27 194 aa18.48■□□□□ 0.55
CHCHD3-203ENST00000448878 A0A1W2PQ64 194 aa18.48■□□□□ 0.55
CHCHD3-203ENST00000448878 B8ZZF3 427 aa18.48■□□□□ 0.55
CHCHD3-203ENST00000448878 CHRNA3P32297 505 aa18.48■□□□□ 0.55
CHCHD3-203ENST00000448878 GGCXP38435 758 aa18.48■□□□□ 0.55
CHCHD3-203ENST00000448878 KRT83P78385 493 aa18.48■□□□□ 0.55
CHCHD3-203ENST00000448878 LRRC63Q05C16 580 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms