RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 ALOX15BO15296 676 aa21.59■■□□□ 1.05
VSX1-206ENST00000444511 RTN2O75298 545 aa21.59■■□□□ 1.05
VSX1-206ENST00000444511 LSM8O95777 96 aaKnown RBP21.59■■□□□ 1.05
VSX1-206ENST00000444511 EEF1GP26641 437 aaKnown RBP21.59■■□□□ 1.05
VSX1-206ENST00000444511 POM121L1PQ3SYA9 428 aa21.59■■□□□ 1.05
VSX1-206ENST00000444511 ALFQ53S48 1182 aa21.59■■□□□ 1.05
VSX1-206ENST00000444511 CCDC157Q569K6 752 aa21.59■■□□□ 1.05
VSX1-206ENST00000444511 TCP11X2Q5H9J9 407 aa21.59■■□□□ 1.05
VSX1-206ENST00000444511 PRPF39Q86UA1 669 aaKnown RBP21.59■■□□□ 1.05
VSX1-206ENST00000444511 XYLT1Q86Y38 959 aa21.59■■□□□ 1.05
VSX1-206ENST00000444511 PIP4K2CQ8TBX8 421 aa21.59■■□□□ 1.05
VSX1-206ENST00000444511 FAM131CQ96AQ9 280 aa21.59■■□□□ 1.05
VSX1-206ENST00000444511 NAA15Q9BXJ9 866 aaKnown RBP21.59■■□□□ 1.05
VSX1-206ENST00000444511 ANLNQ9NQW6 1124 aa21.59■■□□□ 1.05
VSX1-206ENST00000444511 FTSJ1Q9UET6 329 aa21.59■■□□□ 1.05
VSX1-206ENST00000444511 PPM1HQ9ULR3 514 aa21.59■■□□□ 1.05
VSX1-206ENST00000444511 FARP1Q9Y4F1 1045 aaPredicted RBP21.59■■□□□ 1.05
VSX1-206ENST00000444511 SNX10Q9Y5X0 201 aa21.59■■□□□ 1.05
VSX1-206ENST00000444511 GOLGA8SH3BPF8 625 aa21.58■■□□□ 1.05
VSX1-206ENST00000444511 LATO43561 262 aa21.58■■□□□ 1.05
VSX1-206ENST00000444511 PLRG1O43660 514 aaKnown RBP21.58■■□□□ 1.05
VSX1-206ENST00000444511 DKK1O94907 266 aa21.58■■□□□ 1.05
VSX1-206ENST00000444511 CNTN1Q12860 1018 aa21.58■■□□□ 1.05
VSX1-206ENST00000444511 CT47A1Q5JQC4 288 aaPredicted RBP21.58■■□□□ 1.05
VSX1-206ENST00000444511 ACBD5Q5T8D3 534 aaPredicted RBP21.58■■□□□ 1.05
VSX1-206ENST00000444511 NAPEPLDQ6IQ20 393 aa21.58■■□□□ 1.05
VSX1-206ENST00000444511 TMPRSS7Q7RTY8 843 aa21.58■■□□□ 1.05
VSX1-206ENST00000444511 NOP9Q86U38 636 aaKnown RBP21.58■■□□□ 1.05
VSX1-206ENST00000444511 GATAD2AQ86YP4 633 aa21.58■■□□□ 1.05
VSX1-206ENST00000444511 ATP11CQ8NB49 1132 aa21.58■■□□□ 1.05
VSX1-206ENST00000444511 CCDC114Q96M63 670 aa21.58■■□□□ 1.05
VSX1-206ENST00000444511 STK33Q9BYT3 514 aa21.58■■□□□ 1.05
VSX1-206ENST00000444511 HS3ST2Q9Y278 367 aa21.58■■□□□ 1.05
VSX1-206ENST00000444511 PLXNA2O75051 1894 aa21.58■■□□□ 1.04
VSX1-206ENST00000444511 F8VZ95 297 aa21.57■■□□□ 1.04
VSX1-206ENST00000444511 I6L893 689 aaPredicted RBP21.57■■□□□ 1.04
VSX1-206ENST00000444511 TLR4O00206 839 aa21.57■■□□□ 1.04
VSX1-206ENST00000444511 YKT6O15498 198 aa21.57■■□□□ 1.04
VSX1-206ENST00000444511 ITGAVP06756 1048 aa21.57■■□□□ 1.04
VSX1-206ENST00000444511 SRCP12931 536 aa21.57■■□□□ 1.04
VSX1-206ENST00000444511 MAT2AP31153 395 aaKnown RBP21.57■■□□□ 1.04
VSX1-206ENST00000444511 FLT3P36888 993 aa21.57■■□□□ 1.04
VSX1-206ENST00000444511 ARRB1P49407 418 aaPredicted RBP21.57■■□□□ 1.04
VSX1-206ENST00000444511 C2CD6Q53TS8 623 aa21.57■■□□□ 1.04
VSX1-206ENST00000444511 AGBL4Q5VU57 503 aa21.57■■□□□ 1.04
VSX1-206ENST00000444511 TFAP2DQ7Z6R9 452 aa21.57■■□□□ 1.04
VSX1-206ENST00000444511 SETD3Q86TU7 594 aaPredicted RBP21.57■■□□□ 1.04
VSX1-206ENST00000444511 PROSER1Q86XN7 944 aa21.57■■□□□ 1.04
VSX1-206ENST00000444511 ZNF683Q8IZ20 524 aa21.57■■□□□ 1.04
VSX1-206ENST00000444511 C1orf74Q96LT6 269 aa21.57■■□□□ 1.04
VSX1-206ENST00000444511 CCDC86Q9H6F5 360 aaKnown RBP21.57■■□□□ 1.04
VSX1-206ENST00000444511 TAB2Q9NYJ8 693 aa21.57■■□□□ 1.04
VSX1-206ENST00000444511 MPP6Q9NZW5 540 aa21.57■■□□□ 1.04
VSX1-206ENST00000444511 VPS51Q9UID3 782 aa21.57■■□□□ 1.04
VSX1-206ENST00000444511 CHD6Q8TD26 2715 aa21.57■■□□□ 1.04
VSX1-206ENST00000444511 TMEM131Q92545 1883 aa21.57■■□□□ 1.04
VSX1-206ENST00000444511 NYNRINQ9P2P1 1898 aaKnown RBP21.56■■□□□ 1.04
VSX1-206ENST00000444511 DRGXA6NNA5 263 aa21.56■■□□□ 1.04
VSX1-206ENST00000444511 SNAP91O60641 907 aa21.56■■□□□ 1.04
VSX1-206ENST00000444511 MT-CO1P00395 513 aa21.56■■□□□ 1.04
VSX1-206ENST00000444511 CAPNS1P04632 268 aa21.56■■□□□ 1.04
VSX1-206ENST00000444511 MMEP08473 750 aa21.56■■□□□ 1.04
VSX1-206ENST00000444511 NUDT1P36639 197 aa21.56■■□□□ 1.04
VSX1-206ENST00000444511 NXPH1P58417 271 aa21.56■■□□□ 1.04
VSX1-206ENST00000444511 C6orf118Q5T5N4 469 aa21.56■■□□□ 1.04
VSX1-206ENST00000444511 NAA35Q5VZE5 725 aa21.56■■□□□ 1.04
VSX1-206ENST00000444511 GALNT15Q8N3T1 639 aa21.56■■□□□ 1.04
VSX1-206ENST00000444511 MFSD2AQ8NA29 543 aa21.56■■□□□ 1.04
VSX1-206ENST00000444511 DCAF4L2Q8NA75 395 aa21.56■■□□□ 1.04
VSX1-206ENST00000444511 EPS8L1Q8TE68 723 aa21.56■■□□□ 1.04
VSX1-206ENST00000444511 CPA5Q8WXQ8 436 aa21.56■■□□□ 1.04
VSX1-206ENST00000444511 PSMB7Q99436 277 aa21.56■■□□□ 1.04
VSX1-206ENST00000444511 TMPRSS4Q9NRS4 437 aa21.56■■□□□ 1.04
VSX1-206ENST00000444511 DMTF1Q9Y222 760 aa21.56■■□□□ 1.04
VSX1-206ENST00000444511 KNL1Q8NG31 2342 aa21.56■■□□□ 1.04
VSX1-206ENST00000444511 E9PAM4 449 aa21.55■■□□□ 1.04
VSX1-206ENST00000444511 TAF4O00268 1085 aa21.55■■□□□ 1.04
VSX1-206ENST00000444511 SRGAP2O75044 1071 aa21.55■■□□□ 1.04
VSX1-206ENST00000444511 OR1E1P30953 314 aa21.55■■□□□ 1.04
VSX1-206ENST00000444511 NOMO3P69849 1222 aa21.55■■□□□ 1.04
VSX1-206ENST00000444511 SHBQ15464 509 aa21.55■■□□□ 1.04
VSX1-206ENST00000444511 TRIM69Q86WT6 500 aa21.55■■□□□ 1.04
VSX1-206ENST00000444511 SAP25Q8TEE9 199 aa21.55■■□□□ 1.04
VSX1-206ENST00000444511 CFAP57Q96MR6 1250 aa21.55■■□□□ 1.04
VSX1-206ENST00000444511 ARHGAP20Q9P2F6 1191 aa21.55■■□□□ 1.04
VSX1-206ENST00000444511 TMEM59LQ9UK28 342 aa21.55■■□□□ 1.04
VSX1-206ENST00000444511 A0A0D9SEW6 157 aa21.54■■□□□ 1.04
VSX1-206ENST00000444511 K7ERQ8 282 aa21.54■■□□□ 1.04
VSX1-206ENST00000444511 KPNA3O00505 521 aaPredicted RBP21.54■■□□□ 1.04
VSX1-206ENST00000444511 MAGEC1O60732 1142 aa21.54■■□□□ 1.04
VSX1-206ENST00000444511 TPM2P07951 284 aa21.54■■□□□ 1.04
VSX1-206ENST00000444511 RRM1P23921 792 aa21.54■■□□□ 1.04
VSX1-206ENST00000444511 EPHA8P29322 1005 aaPredicted RBP21.54■■□□□ 1.04
VSX1-206ENST00000444511 CHRNA3P32297 505 aa21.54■■□□□ 1.04
VSX1-206ENST00000444511 CLCN6P51797 869 aa21.54■■□□□ 1.04
VSX1-206ENST00000444511 CCDC15Q0P6D6 951 aa21.54■■□□□ 1.04
VSX1-206ENST00000444511 STAT4Q14765 748 aa21.54■■□□□ 1.04
VSX1-206ENST00000444511 SETMARQ53H47 684 aaPredicted RBP21.54■■□□□ 1.04
VSX1-206ENST00000444511 LINGO4Q6UY18 593 aa21.54■■□□□ 1.04
VSX1-206ENST00000444511 IQCHQ86VS3 1027 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms