RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 PDE1BQ01064 536 aa5.51□□□□□ -1.53
VAPA-203ENST00000577539 KDSRQ06136 332 aa5.51□□□□□ -1.53
VAPA-203ENST00000577539 MUM1Q2TAK8 710 aa5.51□□□□□ -1.53
VAPA-203ENST00000577539 OVOS1Q6IE37 1185 aa5.51□□□□□ -1.53
VAPA-203ENST00000577539 CDHR3Q6ZTQ4 885 aa5.51□□□□□ -1.53
VAPA-203ENST00000577539 BEST2Q8NFU1 509 aa5.51□□□□□ -1.53
VAPA-203ENST00000577539 TMEM40Q8WWA1 233 aa5.51□□□□□ -1.53
VAPA-203ENST00000577539 STMN2Q93045 179 aa5.51□□□□□ -1.53
VAPA-203ENST00000577539 BHMTQ93088 406 aa5.51□□□□□ -1.53
VAPA-203ENST00000577539 E2F7Q96AV8 911 aa5.51□□□□□ -1.53
VAPA-203ENST00000577539 ATXN7L3BQ96GX2 97 aa5.51□□□□□ -1.53
VAPA-203ENST00000577539 PRR11Q96HE9 360 aaPredicted RBP5.51□□□□□ -1.53
VAPA-203ENST00000577539 NSL1Q96IY1 281 aa5.51□□□□□ -1.53
VAPA-203ENST00000577539 FGD4Q96M96 766 aa5.51□□□□□ -1.53
VAPA-203ENST00000577539 TM9SF2Q99805 663 aa5.51□□□□□ -1.53
VAPA-203ENST00000577539 MIR1-1HGQ9H1L0 117 aa5.51□□□□□ -1.53
VAPA-203ENST00000577539 CXCL16Q9H2A7 254 aa5.51□□□□□ -1.53
VAPA-203ENST00000577539 TUBGCP4Q9UGJ1 667 aa5.51□□□□□ -1.53
VAPA-203ENST00000577539 PFDN2Q9UHV9 154 aa5.51□□□□□ -1.53
VAPA-203ENST00000577539 ZMYND8Q9ULU4 1186 aaPredicted RBP5.51□□□□□ -1.53
VAPA-203ENST00000577539 AP4E1Q9UPM8 1137 aa5.51□□□□□ -1.53
VAPA-203ENST00000577539 TEX264Q9Y6I9 313 aa5.51□□□□□ -1.53
VAPA-203ENST00000577539 COL11A1P12107 1806 aaPredicted RBP5.5□□□□□ -1.53
VAPA-203ENST00000577539 A0A0G2JLL6 359 aaPredicted RBP5.5□□□□□ -1.53
VAPA-203ENST00000577539 FCHO1O14526 889 aa5.5□□□□□ -1.53
VAPA-203ENST00000577539 TSPAN1O60635 241 aa5.5□□□□□ -1.53
VAPA-203ENST00000577539 HTR3BO95264 441 aa5.5□□□□□ -1.53
VAPA-203ENST00000577539 METTL18O95568 372 aa5.5□□□□□ -1.53
VAPA-203ENST00000577539 TOP3BO95985 862 aaKnown RBP5.5□□□□□ -1.53
VAPA-203ENST00000577539 PDHA1P08559 390 aa5.5□□□□□ -1.53
VAPA-203ENST00000577539 SLC18A1P54219 525 aa5.5□□□□□ -1.53
VAPA-203ENST00000577539 AP1B1Q10567 949 aa5.5□□□□□ -1.53
VAPA-203ENST00000577539 BST1Q10588 318 aa5.5□□□□□ -1.53
VAPA-203ENST00000577539 NME3Q13232 169 aa5.5□□□□□ -1.53
VAPA-203ENST00000577539 KCNJ11Q14654 390 aa5.5□□□□□ -1.53
VAPA-203ENST00000577539 UNC5AQ6ZN44 842 aa5.5□□□□□ -1.53
VAPA-203ENST00000577539 RGS9BPQ6ZS82 235 aa5.5□□□□□ -1.53
VAPA-203ENST00000577539 PRRT2Q7Z6L0 340 aaPredicted RBP5.5□□□□□ -1.53
VAPA-203ENST00000577539 MPP5Q8N3R9 675 aa5.5□□□□□ -1.53
VAPA-203ENST00000577539 PQLC3Q8N755 202 aa5.5□□□□□ -1.53
VAPA-203ENST00000577539 SMC1BQ8NDV3 1235 aa5.5□□□□□ -1.53
VAPA-203ENST00000577539 INPP5DQ92835 1189 aa5.5□□□□□ -1.53
VAPA-203ENST00000577539 SLC7A6OSQ96CW6 309 aaPredicted RBP5.5□□□□□ -1.53
VAPA-203ENST00000577539 AGAP3Q96P47 875 aa5.5□□□□□ -1.53
VAPA-203ENST00000577539 DPEP3Q9H4B8 488 aa5.5□□□□□ -1.53
VAPA-203ENST00000577539 DENND2DQ9H6A0 471 aaPredicted RBP5.5□□□□□ -1.53
VAPA-203ENST00000577539 NRDE2Q9H7Z3 1164 aa5.5□□□□□ -1.53
VAPA-203ENST00000577539 RNPEPL1Q9HAU8 725 aa5.5□□□□□ -1.53
VAPA-203ENST00000577539 USP29Q9HBJ7 922 aa5.5□□□□□ -1.53
VAPA-203ENST00000577539 GBA2Q9HCG7 927 aaPredicted RBP5.5□□□□□ -1.53
VAPA-203ENST00000577539 ADARB2Q9NS39 739 aaKnown RBP5.5□□□□□ -1.53
VAPA-203ENST00000577539 KIAA1257Q9ULG3 409 aa5.5□□□□□ -1.53
VAPA-203ENST00000577539 MTO1Q9Y2Z2 717 aaKnown RBP5.5□□□□□ -1.53
VAPA-203ENST00000577539 EVPLQ92817 2033 aa5.5□□□□□ -1.53
VAPA-203ENST00000577539 A0A1W2PQU0 124 aa5.5□□□□□ -1.53
VAPA-203ENST00000577539 APOEP02649 317 aa5.5□□□□□ -1.53
VAPA-203ENST00000577539 ADORA2AP29274 412 aa5.5□□□□□ -1.53
VAPA-203ENST00000577539 ALDH18A1P54886 795 aaKnown RBP5.5□□□□□ -1.53
VAPA-203ENST00000577539 SARNPP82979 210 aaKnown RBP5.5□□□□□ -1.53
VAPA-203ENST00000577539 ARHGAP1Q07960 439 aa5.5□□□□□ -1.53
VAPA-203ENST00000577539 RASA2Q15283 850 aa5.5□□□□□ -1.53
VAPA-203ENST00000577539 STILQ15468 1287 aa5.5□□□□□ -1.53
VAPA-203ENST00000577539 GRIK4Q16099 956 aa5.5□□□□□ -1.53
VAPA-203ENST00000577539 PARP6Q2NL67 630 aa5.5□□□□□ -1.53
VAPA-203ENST00000577539 DCAF6Q58WW2 860 aa5.5□□□□□ -1.53
VAPA-203ENST00000577539 ATG16L1Q676U5 607 aa5.5□□□□□ -1.53
VAPA-203ENST00000577539 RFWD3Q6PCD5 774 aa5.5□□□□□ -1.53
VAPA-203ENST00000577539 C16orf54Q6UWD8 224 aa5.5□□□□□ -1.53
VAPA-203ENST00000577539 CES3Q6UWW8 571 aa5.5□□□□□ -1.53
VAPA-203ENST00000577539 FASTKD5Q7L8L6 764 aaKnown RBP5.5□□□□□ -1.53
VAPA-203ENST00000577539 ALYREFQ86V81 257 aaKnown RBP5.5□□□□□ -1.53
VAPA-203ENST00000577539 CRLF3Q8IUI8 442 aa5.5□□□□□ -1.53
VAPA-203ENST00000577539 UNC5BQ8IZJ1 945 aa5.5□□□□□ -1.53
VAPA-203ENST00000577539 PYROXD2Q8N2H3 581 aa5.5□□□□□ -1.53
VAPA-203ENST00000577539 TTC16Q8NEE8 873 aa5.5□□□□□ -1.53
VAPA-203ENST00000577539 KCNN1Q92952 543 aa5.5□□□□□ -1.53
VAPA-203ENST00000577539 MED10Q9BTT4 135 aa5.5□□□□□ -1.53
VAPA-203ENST00000577539 MROH8Q9H579 483 aa5.5□□□□□ -1.53
VAPA-203ENST00000577539 EBF2Q9HAK2 575 aa5.5□□□□□ -1.53
VAPA-203ENST00000577539 SLC17A6Q9P2U8 582 aa5.5□□□□□ -1.53
VAPA-203ENST00000577539 MFHAS1Q9Y4C4 1052 aa5.5□□□□□ -1.53
VAPA-203ENST00000577539 MYO18AQ92614 2054 aaKnown RBP5.5□□□□□ -1.53
VAPA-203ENST00000577539 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.5□□□□□ -1.53
VAPA-203ENST00000577539 WDR27A2RRH5 827 aa5.5□□□□□ -1.53
VAPA-203ENST00000577539 ADARB2-AS1A8MUL3 147 aa5.5□□□□□ -1.53
VAPA-203ENST00000577539 H3BRJ5 948 aa5.5□□□□□ -1.53
VAPA-203ENST00000577539 DYNC1LI2O43237 492 aaPredicted RBP5.5□□□□□ -1.53
VAPA-203ENST00000577539 CSH1P0DML2 217 aa5.5□□□□□ -1.53
VAPA-203ENST00000577539 CSH2P0DML3 217 aa5.5□□□□□ -1.53
VAPA-203ENST00000577539 NME1P15531 152 aaKnown RBP5.5□□□□□ -1.53
VAPA-203ENST00000577539 TGM2P21980 687 aa5.5□□□□□ -1.53
VAPA-203ENST00000577539 CALB2P22676 271 aa5.5□□□□□ -1.53
VAPA-203ENST00000577539 GNL1P36915 607 aaPredicted RBP5.5□□□□□ -1.53
VAPA-203ENST00000577539 GABRB2P47870 512 aa5.5□□□□□ -1.53
VAPA-203ENST00000577539 SULT1E1P49888 294 aa5.5□□□□□ -1.53
VAPA-203ENST00000577539 HDAC4P56524 1084 aa5.5□□□□□ -1.53
VAPA-203ENST00000577539 CCNA1P78396 465 aa5.5□□□□□ -1.53
VAPA-203ENST00000577539 CDK16Q00536 496 aa5.5□□□□□ -1.53
VAPA-203ENST00000577539 TAZQ16635 292 aa5.5□□□□□ -1.53
VAPA-203ENST00000577539 MTHFD1LQ6UB35 978 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms