RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 CENPIQ92674 756 aaPredicted RBP5.64□□□□□ -1.51
SYNE2-210ENST00000553455 SH3KBP1Q96B97 665 aa5.64□□□□□ -1.51
SYNE2-210ENST00000553455 ASB2Q96Q27 587 aa5.64□□□□□ -1.51
SYNE2-210ENST00000553455 CD180Q99467 661 aa5.64□□□□□ -1.51
SYNE2-210ENST00000553455 AGAP2Q99490 1192 aa5.64□□□□□ -1.51
SYNE2-210ENST00000553455 EYA3Q99504 573 aa5.64□□□□□ -1.51
SYNE2-210ENST00000553455 LBHD1Q9BQE6 289 aaPredicted RBP5.64□□□□□ -1.51
SYNE2-210ENST00000553455 USP44Q9H0E7 712 aa5.64□□□□□ -1.51
SYNE2-210ENST00000553455 PCED1AQ9H1Q7 454 aa5.64□□□□□ -1.51
SYNE2-210ENST00000553455 BLOC1S4Q9NUP1 217 aa5.64□□□□□ -1.51
SYNE2-210ENST00000553455 BEX4Q9NWD9 120 aaPredicted RBP5.64□□□□□ -1.51
SYNE2-210ENST00000553455 IRAK4Q9NWZ3 460 aa5.64□□□□□ -1.51
SYNE2-210ENST00000553455 ALKBH4Q9NXW9 302 aa5.64□□□□□ -1.51
SYNE2-210ENST00000553455 FBXO4Q9UKT5 387 aa5.64□□□□□ -1.51
SYNE2-210ENST00000553455 NAALADL1Q9UQQ1 740 aa5.64□□□□□ -1.51
SYNE2-210ENST00000553455 A0A087X0M5 115 aa5.63□□□□□ -1.51
SYNE2-210ENST00000553455 GOLGA6L10A0A0M3HER8 536 aa5.63□□□□□ -1.51
SYNE2-210ENST00000553455 A0A1B0GX30 115 aa5.63□□□□□ -1.51
SYNE2-210ENST00000553455 A0A1W2PPH5 198 aa5.63□□□□□ -1.51
SYNE2-210ENST00000553455 LRRC3CA6NJW4 275 aa5.63□□□□□ -1.51
SYNE2-210ENST00000553455 KCNJ18B7U540 433 aa5.63□□□□□ -1.51
SYNE2-210ENST00000553455 F5H0A9 414 aaPredicted RBP5.63□□□□□ -1.51
SYNE2-210ENST00000553455 PER2O15055 1255 aa5.63□□□□□ -1.51
SYNE2-210ENST00000553455 CCNT1O60563 726 aaKnown RBP5.63□□□□□ -1.51
SYNE2-210ENST00000553455 TMEM63AO94886 807 aa5.63□□□□□ -1.51
SYNE2-210ENST00000553455 CD72P21854 359 aa5.63□□□□□ -1.51
SYNE2-210ENST00000553455 BDNFP23560 247 aa5.63□□□□□ -1.51
SYNE2-210ENST00000553455 TACR3P29371 465 aa5.63□□□□□ -1.51
SYNE2-210ENST00000553455 CASP2P42575 452 aa5.63□□□□□ -1.51
SYNE2-210ENST00000553455 OAZ1P54368 228 aa5.63□□□□□ -1.51
SYNE2-210ENST00000553455 DCAF7P61962 342 aa5.63□□□□□ -1.51
SYNE2-210ENST00000553455 YPEL5P62699 121 aa5.63□□□□□ -1.51
SYNE2-210ENST00000553455 PTP4A2Q12974 167 aa5.63□□□□□ -1.51
SYNE2-210ENST00000553455 NAA25Q14CX7 972 aa5.63□□□□□ -1.51
SYNE2-210ENST00000553455 FAM69AQ5T7M9 428 aa5.63□□□□□ -1.51
SYNE2-210ENST00000553455 R3HCC1LQ7Z5L2 792 aaKnown RBP5.63□□□□□ -1.51
SYNE2-210ENST00000553455 CHD1LQ86WJ1 897 aa5.63□□□□□ -1.51
SYNE2-210ENST00000553455 ZNF366Q8N895 744 aa5.63□□□□□ -1.51
SYNE2-210ENST00000553455 SETD9Q8NE22 299 aa5.63□□□□□ -1.51
SYNE2-210ENST00000553455 ZCCHC10Q8TBK6 192 aa5.63□□□□□ -1.51
SYNE2-210ENST00000553455 UCMAQ8WVF2 138 aa5.63□□□□□ -1.51
SYNE2-210ENST00000553455 RAB40AQ8WXH6 277 aa5.63□□□□□ -1.51
SYNE2-210ENST00000553455 NCSTNQ92542 709 aa5.63□□□□□ -1.51
SYNE2-210ENST00000553455 EFHD1Q9BUP0 239 aa5.63□□□□□ -1.51
SYNE2-210ENST00000553455 NPLQ9BXD5 320 aaPredicted RBP5.63□□□□□ -1.51
SYNE2-210ENST00000553455 SLC25A18Q9H1K4 315 aa5.63□□□□□ -1.51
SYNE2-210ENST00000553455 EPHX3Q9H6B9 360 aa5.63□□□□□ -1.51
SYNE2-210ENST00000553455 TTC12Q9H892 705 aaPredicted RBP5.63□□□□□ -1.51
SYNE2-210ENST00000553455 OLA1Q9NTK5 396 aaKnown RBP5.63□□□□□ -1.51
SYNE2-210ENST00000553455 TERF2IPQ9NYB0 399 aa5.63□□□□□ -1.51
SYNE2-210ENST00000553455 FBXO9Q9UK97 447 aaPredicted RBP5.63□□□□□ -1.51
SYNE2-210ENST00000553455 MAFFQ9ULX9 164 aa5.63□□□□□ -1.51
SYNE2-210ENST00000553455 INSL6Q9Y581 213 aa5.63□□□□□ -1.51
SYNE2-210ENST00000553455 TCRBV7S3A2A0A539 114 aa5.62□□□□□ -1.51
SYNE2-210ENST00000553455 GAGE10A6NGK3 116 aa5.62□□□□□ -1.51
SYNE2-210ENST00000553455 PRSS47A8MTI9 375 aa5.62□□□□□ -1.51
SYNE2-210ENST00000553455 HMGB1P1B2RPK0 211 aaPredicted RBP5.62□□□□□ -1.51
SYNE2-210ENST00000553455 DDX58O95786 925 aaKnown RBP5.62□□□□□ -1.51
SYNE2-210ENST00000553455 PLAUP00749 431 aa5.62□□□□□ -1.51
SYNE2-210ENST00000553455 IGLV2-14P01704 120 aa5.62□□□□□ -1.51
SYNE2-210ENST00000553455 URODP06132 367 aa5.62□□□□□ -1.51
SYNE2-210ENST00000553455 RPS6KB1P23443 525 aa5.62□□□□□ -1.51
SYNE2-210ENST00000553455 EPHA8P29322 1005 aaPredicted RBP5.62□□□□□ -1.51
SYNE2-210ENST00000553455 CCR9P51686 369 aa5.62□□□□□ -1.51
SYNE2-210ENST00000553455 CDH15P55291 814 aa5.62□□□□□ -1.51
SYNE2-210ENST00000553455 MTA1Q13330 715 aa5.62□□□□□ -1.51
SYNE2-210ENST00000553455 KIAA1755Q5JYT7 1200 aa5.62□□□□□ -1.51
SYNE2-210ENST00000553455 CCDC30Q5VVM6 783 aa5.62□□□□□ -1.51
SYNE2-210ENST00000553455 SCAIQ8N9R8 606 aa5.62□□□□□ -1.51
SYNE2-210ENST00000553455 ANKRD52Q8NB46 1076 aa5.62□□□□□ -1.51
SYNE2-210ENST00000553455 NFKBIDQ8NI38 313 aa5.62□□□□□ -1.51
SYNE2-210ENST00000553455 IGFBPL1Q8WX77 278 aa5.62□□□□□ -1.51
SYNE2-210ENST00000553455 PIGKQ92643 395 aa5.62□□□□□ -1.51
SYNE2-210ENST00000553455 KRTAP17-1Q9BYP8 105 aa5.62□□□□□ -1.51
SYNE2-210ENST00000553455 OSGIN2Q9Y236 505 aa5.62□□□□□ -1.51
SYNE2-210ENST00000553455 SLC22A23A1A5C7 686 aa5.61□□□□□ -1.51
SYNE2-210ENST00000553455 TEX22C9J3V5 150 aa5.61□□□□□ -1.51
SYNE2-210ENST00000553455 INPPL1O15357 1258 aa5.61□□□□□ -1.51
SYNE2-210ENST00000553455 TNFSF14O43557 240 aa5.61□□□□□ -1.51
SYNE2-210ENST00000553455 USO1O60763 962 aaKnown RBP5.61□□□□□ -1.51
SYNE2-210ENST00000553455 PROP1O75360 226 aa5.61□□□□□ -1.51
SYNE2-210ENST00000553455 COL11A2P13942 1736 aaPredicted RBP5.61□□□□□ -1.51
SYNE2-210ENST00000553455 PAFAH1B1P43034 410 aa5.61□□□□□ -1.51
SYNE2-210ENST00000553455 PTPN9P43378 593 aa5.61□□□□□ -1.51
SYNE2-210ENST00000553455 TUBA4AP68366 448 aa5.61□□□□□ -1.51
SYNE2-210ENST00000553455 SLC18A3Q16572 532 aa5.61□□□□□ -1.51
SYNE2-210ENST00000553455 FBXO43Q4G163 708 aa5.61□□□□□ -1.51
SYNE2-210ENST00000553455 TMEM119Q4V9L6 283 aa5.61□□□□□ -1.51
SYNE2-210ENST00000553455 ZNF667Q5HYK9 610 aa5.61□□□□□ -1.51
SYNE2-210ENST00000553455 INO80CQ6PI98 192 aaPredicted RBP5.61□□□□□ -1.51
SYNE2-210ENST00000553455 ZNF813Q6ZN06 617 aa5.61□□□□□ -1.51
SYNE2-210ENST00000553455 NEK8Q86SG6 692 aa5.61□□□□□ -1.51
SYNE2-210ENST00000553455 UEVLDQ8IX04 471 aa5.61□□□□□ -1.51
SYNE2-210ENST00000553455 C16orf71Q8IYS4 520 aaPredicted RBP5.61□□□□□ -1.51
SYNE2-210ENST00000553455 TMEM217Q8N7C4 229 aa5.61□□□□□ -1.51
SYNE2-210ENST00000553455 ARL14EPQ8N8R7 260 aaPredicted RBP5.61□□□□□ -1.51
SYNE2-210ENST00000553455 C8orf58Q8NAV2 365 aa5.61□□□□□ -1.51
SYNE2-210ENST00000553455 TNIP2Q8NFZ5 429 aa5.61□□□□□ -1.51
SYNE2-210ENST00000553455 ADAMTS15Q8TE58 950 aa5.61□□□□□ -1.51
SYNE2-210ENST00000553455 CNOT9Q92600 299 aaKnown RBP5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms