RNA–Protein interactions for RNA: ENST00000524165.5

PVT1-220, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 458 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-220ENST00000524165 SLC22A18ASQ8N1D0 253 aa18.05■□□□□ 0.48
PVT1-220ENST00000524165 FBXO39Q8N4B4 442 aa18.05■□□□□ 0.48
PVT1-220ENST00000524165 HJURPQ8NCD3 748 aaPredicted RBP18.05■□□□□ 0.48
PVT1-220ENST00000524165 ZNF548Q8NEK5 533 aaPredicted RBP18.05■□□□□ 0.48
PVT1-220ENST00000524165 CYP3A43Q9HB55 503 aa18.05■□□□□ 0.48
PVT1-220ENST00000524165 TUBD1Q9UJT1 453 aa18.05■□□□□ 0.48
PVT1-220ENST00000524165 GOLGA6L7A0A1B0GV03 622 aa18.04■□□□□ 0.48
PVT1-220ENST00000524165 TYW5A2RUC4 315 aaKnown RBP18.04■□□□□ 0.48
PVT1-220ENST00000524165 TPP1O14773 563 aa18.04■□□□□ 0.48
PVT1-220ENST00000524165 NVLO15381 856 aaKnown RBP18.04■□□□□ 0.48
PVT1-220ENST00000524165 EXOC3O60645 756 aa18.04■□□□□ 0.48
PVT1-220ENST00000524165 AKT2P31751 481 aa18.04■□□□□ 0.48
PVT1-220ENST00000524165 UGT1A5P35504 534 aa18.04■□□□□ 0.48
PVT1-220ENST00000524165 TKTL1P51854 596 aa18.04■□□□□ 0.48
PVT1-220ENST00000524165 CNTN1Q12860 1018 aa18.04■□□□□ 0.48
PVT1-220ENST00000524165 CDH18Q13634 790 aa18.04■□□□□ 0.48
PVT1-220ENST00000524165 SPIDRQ14159 915 aa18.04■□□□□ 0.48
PVT1-220ENST00000524165 NR0B2Q15466 257 aa18.04■□□□□ 0.48
PVT1-220ENST00000524165 ZACNQ401N2 412 aa18.04■□□□□ 0.48
PVT1-220ENST00000524165 PERM1Q5SV97 790 aa18.04■□□□□ 0.48
PVT1-220ENST00000524165 SPOPLQ6IQ16 392 aa18.04■□□□□ 0.48
PVT1-220ENST00000524165 NEK5Q6P3R8 708 aa18.04■□□□□ 0.48
PVT1-220ENST00000524165 CRTC1Q6UUV9 634 aa18.04■□□□□ 0.48
PVT1-220ENST00000524165 ABI3BPQ7Z7G0 1075 aa18.04■□□□□ 0.48
PVT1-220ENST00000524165 CCDC117Q8IWD4 279 aaPredicted RBP18.04■□□□□ 0.48
PVT1-220ENST00000524165 UNC45BQ8IWX7 931 aa18.04■□□□□ 0.48
PVT1-220ENST00000524165 HTR3CQ8WXA8 447 aa18.04■□□□□ 0.48
PVT1-220ENST00000524165 NAT6Q93015 286 aa18.04■□□□□ 0.48
PVT1-220ENST00000524165 AZIN2Q96A70 460 aa18.04■□□□□ 0.48
PVT1-220ENST00000524165 MYOCQ99972 504 aa18.04■□□□□ 0.48
PVT1-220ENST00000524165 CEP83Q9Y592 693 aa18.04■□□□□ 0.48
PVT1-220ENST00000524165 FBN2P35556 2912 aa18.04■□□□□ 0.48
PVT1-220ENST00000524165 H3BM21 787 aa18.03■□□□□ 0.48
PVT1-220ENST00000524165 MSI1O43347 362 aaKnown RBP18.03■□□□□ 0.48
PVT1-220ENST00000524165 IGLV3-27P01718 113 aa18.03■□□□□ 0.48
PVT1-220ENST00000524165 CSF2P04141 144 aa18.03■□□□□ 0.48
PVT1-220ENST00000524165 PRLRP16471 622 aa18.03■□□□□ 0.48
PVT1-220ENST00000524165 HNRNPA2B1P22626 353 aaKnown RBP18.03■□□□□ 0.48
PVT1-220ENST00000524165 NNMTP40261 264 aa18.03■□□□□ 0.48
PVT1-220ENST00000524165 CYP4F2P78329 520 aa18.03■□□□□ 0.48
PVT1-220ENST00000524165 ZNF542PQ5EBM4 170 aa18.03■□□□□ 0.48
PVT1-220ENST00000524165 FSCBQ5H9T9 825 aa18.03■□□□□ 0.48
PVT1-220ENST00000524165 NUGGCQ68CJ6 796 aa18.03■□□□□ 0.48
PVT1-220ENST00000524165 RAB11FIP2Q7L804 512 aa18.03■□□□□ 0.48
PVT1-220ENST00000524165 CARNMT1Q8N4J0 409 aa18.03■□□□□ 0.48
PVT1-220ENST00000524165 RPL10LQ96L21 214 aaKnown RBP18.03■□□□□ 0.48
PVT1-220ENST00000524165 PRICKLE1Q96MT3 831 aaPredicted RBP18.03■□□□□ 0.48
PVT1-220ENST00000524165 NOX5Q96PH1 765 aa18.03■□□□□ 0.48
PVT1-220ENST00000524165 SRRTQ9BXP5 876 aaKnown RBP18.03■□□□□ 0.48
PVT1-220ENST00000524165 GPR27Q9NS67 375 aa18.03■□□□□ 0.48
PVT1-220ENST00000524165 SARDHQ9UL12 918 aa18.03■□□□□ 0.48
PVT1-220ENST00000524165 SRPK3Q9UPE1 567 aa18.03■□□□□ 0.48
PVT1-220ENST00000524165 TRPM6Q9BX84 2022 aa18.03■□□□□ 0.48
PVT1-220ENST00000524165 TMX2-CTNND1H3BSU7 103 aa18.02■□□□□ 0.48
PVT1-220ENST00000524165 NTN3O00634 580 aaPredicted RBP18.02■□□□□ 0.48
PVT1-220ENST00000524165 ACSL4O60488 711 aa18.02■□□□□ 0.48
PVT1-220ENST00000524165 NME1P15531 152 aaKnown RBP18.02■□□□□ 0.48
PVT1-220ENST00000524165 RPIAP49247 311 aa18.02■□□□□ 0.48
PVT1-220ENST00000524165 RIPPLY3P57055 190 aa18.02■□□□□ 0.48
PVT1-220ENST00000524165 TAS2R38P59533 333 aa18.02■□□□□ 0.48
PVT1-220ENST00000524165 KCNAB2Q13303 367 aa18.02■□□□□ 0.48
PVT1-220ENST00000524165 BSPRYQ5W0U4 402 aa18.02■□□□□ 0.48
PVT1-220ENST00000524165 GCNT7Q6ZNI0 430 aa18.02■□□□□ 0.48
PVT1-220ENST00000524165 MMS22LQ6ZRQ5 1243 aa18.02■□□□□ 0.48
PVT1-220ENST00000524165 BRAPQ7Z569 592 aa18.02■□□□□ 0.48
PVT1-220ENST00000524165 OR8D1Q8WZ84 308 aa18.02■□□□□ 0.48
PVT1-220ENST00000524165 EDEM1Q92611 657 aa18.02■□□□□ 0.48
PVT1-220ENST00000524165 GLMNQ92990 594 aa18.02■□□□□ 0.48
PVT1-220ENST00000524165 DDX50Q9BQ39 737 aaKnown RBP18.02■□□□□ 0.48
PVT1-220ENST00000524165 ULBP1Q9BZM6 244 aa18.02■□□□□ 0.48
PVT1-220ENST00000524165 TFIP11Q9UBB9 837 aaKnown RBP18.02■□□□□ 0.48
PVT1-220ENST00000524165 FBXO2Q9UK22 296 aaPredicted RBP18.02■□□□□ 0.48
PVT1-220ENST00000524165 SRPRBQ9Y5M8 271 aaKnown RBP18.02■□□□□ 0.48
PVT1-220ENST00000524165 A0A1W2PQU0 124 aa18.01■□□□□ 0.47
PVT1-220ENST00000524165 A6NNZ2 444 aa18.01■□□□□ 0.47
PVT1-220ENST00000524165 C1QTNF3-AMACRE9PGA6 284 aa18.01■□□□□ 0.47
PVT1-220ENST00000524165 MUSKO15146 869 aa18.01■□□□□ 0.47
PVT1-220ENST00000524165 AQP9O43315 295 aa18.01■□□□□ 0.47
PVT1-220ENST00000524165 VAV1P15498 845 aa18.01■□□□□ 0.47
PVT1-220ENST00000524165 WT1P19544 449 aaPredicted RBP18.01■□□□□ 0.47
PVT1-220ENST00000524165 STK19P49842 368 aaPredicted RBP18.01■□□□□ 0.47
PVT1-220ENST00000524165 SLC8A3P57103 927 aa18.01■□□□□ 0.47
PVT1-220ENST00000524165 RPS24P62847 133 aaKnown RBP18.01■□□□□ 0.47
PVT1-220ENST00000524165 ZNF284Q2VY69 593 aa18.01■□□□□ 0.47
PVT1-220ENST00000524165 FAM26FQ5R3K3 315 aa18.01■□□□□ 0.47
PVT1-220ENST00000524165 BORAQ6PGQ7 559 aa18.01■□□□□ 0.47
PVT1-220ENST00000524165 Q6ZSR6 202 aa18.01■□□□□ 0.47
PVT1-220ENST00000524165 SV2AQ7L0J3 742 aa18.01■□□□□ 0.47
PVT1-220ENST00000524165 VASH2Q86V25 355 aa18.01■□□□□ 0.47
PVT1-220ENST00000524165 NELFCDQ8IXH7 590 aa18.01■□□□□ 0.47
PVT1-220ENST00000524165 FRS2Q8WU20 508 aa18.01■□□□□ 0.47
PVT1-220ENST00000524165 NDRG1Q92597 394 aaKnown RBP18.01■□□□□ 0.47
PVT1-220ENST00000524165 KLK6Q92876 244 aa18.01■□□□□ 0.47
PVT1-220ENST00000524165 BOCQ9BWV1 1114 aa18.01■□□□□ 0.47
PVT1-220ENST00000524165 LRRC27Q9C0I9 530 aa18.01■□□□□ 0.47
PVT1-220ENST00000524165 STRADBQ9C0K7 418 aa18.01■□□□□ 0.47
PVT1-220ENST00000524165 EPB41L5Q9HCM4 733 aa18.01■□□□□ 0.47
PVT1-220ENST00000524165 FZD3Q9NPG1 666 aa18.01■□□□□ 0.47
PVT1-220ENST00000524165 ABCC13Q9NSE7 274 aa18.01■□□□□ 0.47
PVT1-220ENST00000524165 PPM1HQ9ULR3 514 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms