RNA–Protein interactions for RNA: ENST00000394949.8

SIN3A-203, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 4,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-203ENST00000394949 SLC6A3Q01959 620 aa17.5■□□□□ 0.39
SIN3A-203ENST00000394949 UBAP2LQ14157 1087 aaKnown RBP17.5■□□□□ 0.39
SIN3A-203ENST00000394949 ARHGAP15Q53QZ3 475 aa17.5■□□□□ 0.39
SIN3A-203ENST00000394949 ZNF470Q6ECI4 717 aa17.5■□□□□ 0.39
SIN3A-203ENST00000394949 PIWIL4Q7Z3Z4 852 aaKnown RBP17.5■□□□□ 0.39
SIN3A-203ENST00000394949 PCSK9Q8NBP7 692 aaKnown RBP17.5■□□□□ 0.39
SIN3A-203ENST00000394949 SPATA16Q9BXB7 569 aa17.5■□□□□ 0.39
SIN3A-203ENST00000394949 RGS18Q9NS28 235 aa17.5■□□□□ 0.39
SIN3A-203ENST00000394949 RAB26Q9ULW5 256 aa17.5■□□□□ 0.39
SIN3A-203ENST00000394949 DCCP43146 1447 aa17.5■□□□□ 0.39
SIN3A-203ENST00000394949 DIP2BQ9P265 1576 aa17.49■□□□□ 0.39
SIN3A-203ENST00000394949 EML1O00423 815 aa17.49■□□□□ 0.39
SIN3A-203ENST00000394949 TRAFD1O14545 582 aaPredicted RBP17.49■□□□□ 0.39
SIN3A-203ENST00000394949 GUCA1CO95843 209 aa17.49■□□□□ 0.39
SIN3A-203ENST00000394949 ADGRF2Q8IZF7 708 aa17.49■□□□□ 0.39
SIN3A-203ENST00000394949 EZH1Q92800 747 aaPredicted RBP17.49■□□□□ 0.39
SIN3A-203ENST00000394949 HAS1Q92839 578 aa17.49■□□□□ 0.39
SIN3A-203ENST00000394949 DGCR6LQ9BY27 220 aa17.49■□□□□ 0.39
SIN3A-203ENST00000394949 DSEQ9UL01 958 aa17.49■□□□□ 0.39
SIN3A-203ENST00000394949 PRR23AA6NEV1 266 aa17.49■□□□□ 0.39
SIN3A-203ENST00000394949 SYNCRIPO60506 623 aaKnown RBP17.49■□□□□ 0.39
SIN3A-203ENST00000394949 SLC2A4P14672 509 aa17.49■□□□□ 0.39
SIN3A-203ENST00000394949 POU1F1P28069 291 aa17.49■□□□□ 0.39
SIN3A-203ENST00000394949 NDUFA5Q16718 116 aa17.49■□□□□ 0.39
SIN3A-203ENST00000394949 PGS1Q32NB8 556 aa17.49■□□□□ 0.39
SIN3A-203ENST00000394949 NBPF12Q5TAG4 269 aaPredicted RBP17.49■□□□□ 0.39
SIN3A-203ENST00000394949 ADCK2Q7Z695 626 aa17.49■□□□□ 0.39
SIN3A-203ENST00000394949 ALYREFQ86V81 257 aaKnown RBP17.49■□□□□ 0.39
SIN3A-203ENST00000394949 CLEC4MQ9H2X3 399 aaPredicted RBP17.49■□□□□ 0.39
SIN3A-203ENST00000394949 RBM22Q9NW64 420 aaKnown RBP eCLIP17.49■□□□□ 0.39
SIN3A-203ENST00000394949 CDH9Q9ULB4 789 aa17.49■□□□□ 0.39
SIN3A-203ENST00000394949 A8MUI8 341 aa17.49■□□□□ 0.39
SIN3A-203ENST00000394949 CYB561D2O14569 222 aa17.49■□□□□ 0.39
SIN3A-203ENST00000394949 CXCL11O14625 94 aa17.49■□□□□ 0.39
SIN3A-203ENST00000394949 GJB6O95452 261 aa17.49■□□□□ 0.39
SIN3A-203ENST00000394949 IRF1P10914 325 aa17.49■□□□□ 0.39
SIN3A-203ENST00000394949 FGFR3P22607 806 aa17.49■□□□□ 0.39
SIN3A-203ENST00000394949 AMPD1P23109 780 aa17.49■□□□□ 0.39
SIN3A-203ENST00000394949 CCNG1P51959 295 aa17.49■□□□□ 0.39
SIN3A-203ENST00000394949 NAGLUP54802 743 aa17.49■□□□□ 0.39
SIN3A-203ENST00000394949 GTF2BQ00403 316 aa17.49■□□□□ 0.39
SIN3A-203ENST00000394949 NFE2Q16621 373 aaPredicted RBP17.49■□□□□ 0.39
SIN3A-203ENST00000394949 FAM228AQ86W67 206 aa17.49■□□□□ 0.39
SIN3A-203ENST00000394949 MAGEE2Q8TD90 523 aaPredicted RBP17.49■□□□□ 0.39
SIN3A-203ENST00000394949 BTBD9Q96Q07 612 aa17.49■□□□□ 0.39
SIN3A-203ENST00000394949 WDR12Q9GZL7 423 aaKnown RBP17.49■□□□□ 0.39
SIN3A-203ENST00000394949 ELOVL6Q9H5J4 265 aa17.49■□□□□ 0.39
SIN3A-203ENST00000394949 GALNT8Q9NY28 637 aa17.49■□□□□ 0.39
SIN3A-203ENST00000394949 SFMBT1Q9UHJ3 866 aa17.49■□□□□ 0.39
SIN3A-203ENST00000394949 C3orf18Q9UK00 162 aa17.49■□□□□ 0.39
SIN3A-203ENST00000394949 MEGF6O75095 1541 aa17.49■□□□□ 0.39
SIN3A-203ENST00000394949 VAPBO95292 243 aa17.49■□□□□ 0.39
SIN3A-203ENST00000394949 ATP5F1P24539 256 aaPredicted RBP17.49■□□□□ 0.39
SIN3A-203ENST00000394949 SHMT1P34896 483 aa17.49■□□□□ 0.39
SIN3A-203ENST00000394949 TSNQ15631 228 aaKnown RBP17.49■□□□□ 0.39
SIN3A-203ENST00000394949 PTAR1Q7Z6K3 402 aaPredicted RBP17.49■□□□□ 0.39
SIN3A-203ENST00000394949 NT5DC4Q86YG4 428 aa17.49■□□□□ 0.39
SIN3A-203ENST00000394949 CYP2W1Q8TAV3 490 aa17.49■□□□□ 0.39
SIN3A-203ENST00000394949 APBA2Q99767 749 aa17.49■□□□□ 0.39
SIN3A-203ENST00000394949 EBNA1BP2Q99848 306 aaKnown RBP17.49■□□□□ 0.39
SIN3A-203ENST00000394949 SLC4A5Q9BY07 1137 aa17.49■□□□□ 0.39
SIN3A-203ENST00000394949 SPATC1LQ9H0A9 340 aa17.49■□□□□ 0.39
SIN3A-203ENST00000394949 PIF1Q9H611 641 aa17.49■□□□□ 0.39
SIN3A-203ENST00000394949 UBA2Q9UBT2 640 aaPredicted RBP17.49■□□□□ 0.39
SIN3A-203ENST00000394949 SPATA31D1Q6ZQQ2 1576 aa17.48■□□□□ 0.39
SIN3A-203ENST00000394949 FAM25AB3EWG3 89 aa17.48■□□□□ 0.39
SIN3A-203ENST00000394949 FAM25CB3EWG5 89 aa17.48■□□□□ 0.39
SIN3A-203ENST00000394949 FAM25GB3EWG6 89 aa17.48■□□□□ 0.39
SIN3A-203ENST00000394949 MAGEA10P43363 369 aaPredicted RBP17.48■□□□□ 0.39
SIN3A-203ENST00000394949 VGLL2Q8N8G2 317 aa17.48■□□□□ 0.39
SIN3A-203ENST00000394949 CERS2Q96G23 380 aa17.48■□□□□ 0.39
SIN3A-203ENST00000394949 C7orf26Q96N11 449 aa17.48■□□□□ 0.39
SIN3A-203ENST00000394949 ITGALP20701 1170 aa17.48■□□□□ 0.39
SIN3A-203ENST00000394949 NDST1P52848 882 aa17.48■□□□□ 0.39
SIN3A-203ENST00000394949 CDH18Q13634 790 aa17.48■□□□□ 0.39
SIN3A-203ENST00000394949 LPIN1Q14693 890 aa17.48■□□□□ 0.39
SIN3A-203ENST00000394949 C3orf67Q6ZVT6 689 aa17.48■□□□□ 0.39
SIN3A-203ENST00000394949 KLHL23Q8NBE8 558 aa17.48■□□□□ 0.39
SIN3A-203ENST00000394949 GSTCDQ8NEC7 633 aa17.48■□□□□ 0.39
SIN3A-203ENST00000394949 UTP15Q8TED0 518 aaKnown RBP17.48■□□□□ 0.39
SIN3A-203ENST00000394949 DENND2DQ9H6A0 471 aaPredicted RBP17.48■□□□□ 0.39
SIN3A-203ENST00000394949 HPS4Q9NQG7 708 aa17.48■□□□□ 0.39
SIN3A-203ENST00000394949 TAS2R13Q9NYV9 303 aa17.48■□□□□ 0.39
SIN3A-203ENST00000394949 FAM220BPB1ANY3 271 aa17.48■□□□□ 0.39
SIN3A-203ENST00000394949 H3BRB1 525 aa17.48■□□□□ 0.39
SIN3A-203ENST00000394949 EGFRP00533 1210 aa17.48■□□□□ 0.39
SIN3A-203ENST00000394949 LRG1P02750 347 aa17.48■□□□□ 0.39
SIN3A-203ENST00000394949 LHX1P48742 406 aa17.48■□□□□ 0.39
SIN3A-203ENST00000394949 FBXW4P57775 412 aa17.48■□□□□ 0.39
SIN3A-203ENST00000394949 HYIQ5T013 277 aa17.48■□□□□ 0.39
SIN3A-203ENST00000394949 FBXO16Q8IX29 292 aaPredicted RBP17.48■□□□□ 0.39
SIN3A-203ENST00000394949 MAB21L3Q8N8X9 362 aa17.48■□□□□ 0.39
SIN3A-203ENST00000394949 ARRDC4Q8NCT1 418 aa17.48■□□□□ 0.39
SIN3A-203ENST00000394949 MCRS1Q96EZ8 462 aa17.48■□□□□ 0.39
SIN3A-203ENST00000394949 NUAK2Q9H093 628 aa17.48■□□□□ 0.39
SIN3A-203ENST00000394949 RIBC2Q9H4K1 309 aa17.48■□□□□ 0.39
SIN3A-203ENST00000394949 TUT1Q9H6E5 874 aaKnown RBP17.48■□□□□ 0.39
SIN3A-203ENST00000394949 GBA2Q9HCG7 927 aaPredicted RBP17.48■□□□□ 0.39
SIN3A-203ENST00000394949 CRNNQ9UBG3 495 aaPredicted RBP17.48■□□□□ 0.39
SIN3A-203ENST00000394949 RAD51BO15315 384 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms