RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 KRT20P35900 424 aa8.54□□□□□ -1.04
VPS36-201ENST00000378060 RAP1GDS1P52306 607 aa8.54□□□□□ -1.04
VPS36-201ENST00000378060 MAP3K7CLP57077 242 aa8.54□□□□□ -1.04
VPS36-201ENST00000378060 NAA20P61599 178 aa8.54□□□□□ -1.04
VPS36-201ENST00000378060 MRPS22P82650 360 aaKnown RBP8.54□□□□□ -1.04
VPS36-201ENST00000378060 ACVR2BQ13705 512 aa8.54□□□□□ -1.04
VPS36-201ENST00000378060 C16orf72Q14CZ0 275 aa8.54□□□□□ -1.04
VPS36-201ENST00000378060 GNASQ5JWF2 1037 aa8.54□□□□□ -1.04
VPS36-201ENST00000378060 ZNF470Q6ECI4 717 aa8.54□□□□□ -1.04
VPS36-201ENST00000378060 NUDT18Q6ZVK8 323 aa8.54□□□□□ -1.04
VPS36-201ENST00000378060 PIWIL4Q7Z3Z4 852 aaKnown RBP8.54□□□□□ -1.04
VPS36-201ENST00000378060 ZCCHC7Q8N3Z6 543 aaKnown RBP8.54□□□□□ -1.04
VPS36-201ENST00000378060 FBXO39Q8N4B4 442 aa8.54□□□□□ -1.04
VPS36-201ENST00000378060 CASP10Q92851 521 aa8.54□□□□□ -1.04
VPS36-201ENST00000378060 TLCD1Q96CP7 247 aa8.54□□□□□ -1.04
VPS36-201ENST00000378060 PHF21BQ96EK2 531 aa8.54□□□□□ -1.04
VPS36-201ENST00000378060 MFSD14AQ96MC6 490 aa8.54□□□□□ -1.04
VPS36-201ENST00000378060 ZNF670Q9BS34 389 aa8.54□□□□□ -1.04
VPS36-201ENST00000378060 NT5MQ9NPB1 228 aa8.54□□□□□ -1.04
VPS36-201ENST00000378060 UBP1Q9NZI7 540 aa8.54□□□□□ -1.04
VPS36-201ENST00000378060 ITGB1BP2Q9UKP3 347 aa8.54□□□□□ -1.04
VPS36-201ENST00000378060 COL2A1P02458 1487 aaPredicted RBP8.54□□□□□ -1.04
VPS36-201ENST00000378060 TMEM150BA6NC51 233 aa8.53□□□□□ -1.04
VPS36-201ENST00000378060 LACTBL1A8MY62 500 aa8.53□□□□□ -1.04
VPS36-201ENST00000378060 F8W810 466 aa8.53□□□□□ -1.04
VPS36-201ENST00000378060 PSMD12O00232 456 aaPredicted RBP8.53□□□□□ -1.04
VPS36-201ENST00000378060 PHGDHO43175 533 aaKnown RBP8.53□□□□□ -1.04
VPS36-201ENST00000378060 PEX10O60683 326 aa8.53□□□□□ -1.04
VPS36-201ENST00000378060 DLGAP3O95886 979 aa8.53□□□□□ -1.04
VPS36-201ENST00000378060 VTNP04004 478 aa8.53□□□□□ -1.04
VPS36-201ENST00000378060 MSH3P20585 1137 aa8.53□□□□□ -1.04
VPS36-201ENST00000378060 FLT3P36888 993 aa8.53□□□□□ -1.04
VPS36-201ENST00000378060 MLH1P40692 756 aa8.53□□□□□ -1.04
VPS36-201ENST00000378060 CCT8P50990 548 aa8.53□□□□□ -1.04
VPS36-201ENST00000378060 ANXA11P50995 505 aaKnown RBP8.53□□□□□ -1.04
VPS36-201ENST00000378060 NAGLUP54802 743 aa8.53□□□□□ -1.04
VPS36-201ENST00000378060 HADHBP55084 474 aaKnown RBP8.53□□□□□ -1.04
VPS36-201ENST00000378060 ADARP55265 1226 aaKnown RBP8.53□□□□□ -1.04
VPS36-201ENST00000378060 OXCT1P55809 520 aa8.53□□□□□ -1.04
VPS36-201ENST00000378060 PTP4A2Q12974 167 aa8.53□□□□□ -1.04
VPS36-201ENST00000378060 C16orf46Q6P387 395 aa8.53□□□□□ -1.04
VPS36-201ENST00000378060 ZNF410Q86VK4 478 aa8.53□□□□□ -1.04
VPS36-201ENST00000378060 RP9Q8TA86 221 aaKnown RBP8.53□□□□□ -1.04
VPS36-201ENST00000378060 CERS2Q96G23 380 aa8.53□□□□□ -1.04
VPS36-201ENST00000378060 APBA2Q99767 749 aa8.53□□□□□ -1.04
VPS36-201ENST00000378060 WDR18Q9BV38 432 aa8.53□□□□□ -1.04
VPS36-201ENST00000378060 SPATC1LQ9H0A9 340 aa8.53□□□□□ -1.04
VPS36-201ENST00000378060 KLHL25Q9H0H3 589 aa8.53□□□□□ -1.04
VPS36-201ENST00000378060 COPS7BQ9H9Q2 264 aaPredicted RBP8.53□□□□□ -1.04
VPS36-201ENST00000378060 TMCC3Q9ULS5 477 aa8.53□□□□□ -1.04
VPS36-201ENST00000378060 ABT1Q9ULW3 272 aaKnown RBP8.53□□□□□ -1.04
VPS36-201ENST00000378060 TPRKBQ9Y3C4 175 aa8.53□□□□□ -1.04
VPS36-201ENST00000378060 TRUB2O95900 331 aaKnown RBP8.53□□□□□ -1.04
VPS36-201ENST00000378060 ERBB2P04626 1255 aa8.53□□□□□ -1.04
VPS36-201ENST00000378060 COX4I1P13073 169 aa8.53□□□□□ -1.04
VPS36-201ENST00000378060 NME5P56597 212 aa8.53□□□□□ -1.04
VPS36-201ENST00000378060 ADIGQ0VDE8 80 aa8.53□□□□□ -1.04
VPS36-201ENST00000378060 ATP13A4Q4VNC1 1196 aa8.53□□□□□ -1.04
VPS36-201ENST00000378060 RDH11Q8TC12 318 aa8.53□□□□□ -1.04
VPS36-201ENST00000378060 FBXO32Q969P5 355 aa8.53□□□□□ -1.04
VPS36-201ENST00000378060 CPB2Q96IY4 423 aa8.53□□□□□ -1.04
VPS36-201ENST00000378060 SPATA16Q9BXB7 569 aa8.53□□□□□ -1.04
VPS36-201ENST00000378060 DDX18Q9NVP1 670 aaKnown RBP8.53□□□□□ -1.04
VPS36-201ENST00000378060 CCDC167Q9P0B6 97 aa8.53□□□□□ -1.04
VPS36-201ENST00000378060 MCM8Q9UJA3 840 aa8.53□□□□□ -1.04
VPS36-201ENST00000378060 PCDHA11Q9Y5I1 949 aa8.53□□□□□ -1.04
VPS36-201ENST00000378060 PAPPA2Q9BXP8 1791 aa8.53□□□□□ -1.04
VPS36-201ENST00000378060 PHIPQ8WWQ0 1821 aa8.53□□□□□ -1.04
VPS36-201ENST00000378060 IGKV6D-41A0A0C4DH26 115 aa8.53□□□□□ -1.04
VPS36-201ENST00000378060 TPP1O14773 563 aa8.53□□□□□ -1.04
VPS36-201ENST00000378060 KATNA1O75449 491 aa8.53□□□□□ -1.04
VPS36-201ENST00000378060 ITGBL1O95965 494 aaPredicted RBP8.53□□□□□ -1.04
VPS36-201ENST00000378060 ACAT1P24752 427 aaKnown RBP8.53□□□□□ -1.04
VPS36-201ENST00000378060 RRM2P31350 389 aa8.53□□□□□ -1.04
VPS36-201ENST00000378060 PPP3CCP48454 512 aa8.53□□□□□ -1.04
VPS36-201ENST00000378060 PURAQ00577 322 aaKnown RBP8.53□□□□□ -1.04
VPS36-201ENST00000378060 TRAF2Q12933 501 aa8.53□□□□□ -1.04
VPS36-201ENST00000378060 POLD3Q15054 466 aaPredicted RBP8.53□□□□□ -1.04
VPS36-201ENST00000378060 NEPROQ6NW34 567 aa8.53□□□□□ -1.04
VPS36-201ENST00000378060 PTAR1Q7Z6K3 402 aaPredicted RBP8.53□□□□□ -1.04
VPS36-201ENST00000378060 EID3Q8N140 333 aa8.53□□□□□ -1.04
VPS36-201ENST00000378060 RNF148Q8N7C7 305 aa8.53□□□□□ -1.04
VPS36-201ENST00000378060 OR56A4Q8NGH8 313 aa8.53□□□□□ -1.04
VPS36-201ENST00000378060 ZNF483Q8TF39 744 aaPredicted RBP8.53□□□□□ -1.04
VPS36-201ENST00000378060 COLEC11Q9BWP8 271 aa8.53□□□□□ -1.04
VPS36-201ENST00000378060 DPY30Q9C005 99 aa8.53□□□□□ -1.04
VPS36-201ENST00000378060 DHX33Q9H6R0 707 aaKnown RBP8.53□□□□□ -1.04
VPS36-201ENST00000378060 RAP2CQ9Y3L5 183 aa8.53□□□□□ -1.04
VPS36-201ENST00000378060 TMEM191CA6NGB0 347 aa8.53□□□□□ -1.04
VPS36-201ENST00000378060 TRAFD1O14545 582 aaPredicted RBP8.53□□□□□ -1.04
VPS36-201ENST00000378060 RGS5O15539 181 aa8.53□□□□□ -1.04
VPS36-201ENST00000378060 TGDSO95455 350 aa8.53□□□□□ -1.04
VPS36-201ENST00000378060 ASMTLO95671 621 aa8.53□□□□□ -1.04
VPS36-201ENST00000378060 SNHG28P0DPA3 235 aa8.53□□□□□ -1.04
VPS36-201ENST00000378060 TPH1P17752 444 aa8.53□□□□□ -1.04
VPS36-201ENST00000378060 ATP5F1P24539 256 aaPredicted RBP8.53□□□□□ -1.04
VPS36-201ENST00000378060 GABRB2P47870 512 aa8.53□□□□□ -1.04
VPS36-201ENST00000378060 C21orf59P57076 290 aa8.53□□□□□ -1.04
VPS36-201ENST00000378060 SLC25A3Q00325 362 aa8.53□□□□□ -1.04
VPS36-201ENST00000378060 VAC14Q08AM6 782 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms