RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 MAN1C1Q9NR34 630 aa12.37□□□□□ -0.43
USF1-203ENST00000368021 VPS18Q9P253 973 aa12.37□□□□□ -0.43
USF1-203ENST00000368021 TCF20Q9UGU0 1960 aaKnown RBP12.37□□□□□ -0.43
USF1-203ENST00000368021 A0A0A0MRY4 1105 aa12.37□□□□□ -0.43
USF1-203ENST00000368021 C2orf78A6NCI8 922 aa12.37□□□□□ -0.43
USF1-203ENST00000368021 DRGXA6NNA5 263 aa12.37□□□□□ -0.43
USF1-203ENST00000368021 OPHN1O60890 802 aa12.37□□□□□ -0.43
USF1-203ENST00000368021 RFPL2O75678 378 aa12.37□□□□□ -0.43
USF1-203ENST00000368021 STK10O94804 968 aaKnown RBP12.37□□□□□ -0.43
USF1-203ENST00000368021 HMBSP08397 361 aa12.37□□□□□ -0.43
USF1-203ENST00000368021 IL9P15248 144 aa12.37□□□□□ -0.43
USF1-203ENST00000368021 VAV1P15498 845 aa12.37□□□□□ -0.43
USF1-203ENST00000368021 CDC25CP30307 473 aa12.37□□□□□ -0.43
USF1-203ENST00000368021 HSD17B3P37058 310 aa12.37□□□□□ -0.43
USF1-203ENST00000368021 SLC11A2P49281 568 aa12.37□□□□□ -0.43
USF1-203ENST00000368021 AP1B1Q10567 949 aa12.37□□□□□ -0.43
USF1-203ENST00000368021 C5orf22Q49AR2 442 aa12.37□□□□□ -0.43
USF1-203ENST00000368021 PPM1LQ5SGD2 360 aa12.37□□□□□ -0.43
USF1-203ENST00000368021 RARS2Q5T160 578 aaKnown RBP12.37□□□□□ -0.43
USF1-203ENST00000368021 WLSQ5T9L3 541 aa12.37□□□□□ -0.43
USF1-203ENST00000368021 AFMIDQ63HM1 303 aa12.37□□□□□ -0.43
USF1-203ENST00000368021 FBXL22Q6P050 247 aa12.37□□□□□ -0.43
USF1-203ENST00000368021 TMEM184AQ6ZMB5 413 aa12.37□□□□□ -0.43
USF1-203ENST00000368021 GAREM2Q75VX8 874 aa12.37□□□□□ -0.43
USF1-203ENST00000368021 IQCKQ8N0W5 287 aa12.37□□□□□ -0.43
USF1-203ENST00000368021 NAT8LQ8N9F0 302 aa12.37□□□□□ -0.43
USF1-203ENST00000368021 PRCCQ92733 491 aaPredicted RBP12.37□□□□□ -0.43
USF1-203ENST00000368021 P2RY11Q96G91 374 aa12.37□□□□□ -0.43
USF1-203ENST00000368021 SPATA13Q96N96 652 aa12.37□□□□□ -0.43
USF1-203ENST00000368021 KLF16Q9BXK1 252 aaPredicted RBP12.37□□□□□ -0.43
USF1-203ENST00000368021 RNF38Q9H0F5 515 aa12.37□□□□□ -0.43
USF1-203ENST00000368021 SUDS3Q9H7L9 328 aaPredicted RBP12.37□□□□□ -0.43
USF1-203ENST00000368021 TMEM248Q9NWD8 314 aa12.37□□□□□ -0.43
USF1-203ENST00000368021 DPP7Q9UHL4 492 aa12.37□□□□□ -0.43
USF1-203ENST00000368021 CD207Q9UJ71 328 aa12.37□□□□□ -0.43
USF1-203ENST00000368021 GGA2Q9UJY4 613 aa12.37□□□□□ -0.43
USF1-203ENST00000368021 VANGL2Q9ULK5 521 aa12.37□□□□□ -0.43
USF1-203ENST00000368021 ATP8A1Q9Y2Q0 1164 aa12.37□□□□□ -0.43
USF1-203ENST00000368021 GOLGA6BA6NDN3 693 aa12.36□□□□□ -0.43
USF1-203ENST00000368021 CHADO15335 359 aa12.36□□□□□ -0.43
USF1-203ENST00000368021 ACSL4O60488 711 aa12.36□□□□□ -0.43
USF1-203ENST00000368021 STC2O76061 302 aa12.36□□□□□ -0.43
USF1-203ENST00000368021 KIAA0754O94854 1291 aa12.36□□□□□ -0.43
USF1-203ENST00000368021 FGF19O95750 216 aa12.36□□□□□ -0.43
USF1-203ENST00000368021 LATS1O95835 1130 aa12.36□□□□□ -0.43
USF1-203ENST00000368021 EZRP15311 586 aaKnown RBP12.36□□□□□ -0.43
USF1-203ENST00000368021 GABRR2P28476 465 aa12.36□□□□□ -0.43
USF1-203ENST00000368021 MAGEA6P43360 314 aa12.36□□□□□ -0.43
USF1-203ENST00000368021 PMS2P54278 862 aa12.36□□□□□ -0.43
USF1-203ENST00000368021 NRLP54845 237 aa12.36□□□□□ -0.43
USF1-203ENST00000368021 LEXMQ3ZCV2 418 aa12.36□□□□□ -0.43
USF1-203ENST00000368021 NADSYN1Q6IA69 706 aa12.36□□□□□ -0.43
USF1-203ENST00000368021 TRMT10CQ7L0Y3 403 aaKnown RBP12.36□□□□□ -0.43
USF1-203ENST00000368021 UMODL1-AS1Q8N2C9 162 aa12.36□□□□□ -0.43
USF1-203ENST00000368021 SMRP1Q8NCR6 262 aa12.36□□□□□ -0.43
USF1-203ENST00000368021 CCNYQ8ND76 341 aa12.36□□□□□ -0.43
USF1-203ENST00000368021 MRPS31Q92665 395 aaKnown RBP12.36□□□□□ -0.43
USF1-203ENST00000368021 TSGA13Q96PP4 275 aa12.36□□□□□ -0.43
USF1-203ENST00000368021 PABPC3Q9H361 631 aaKnown RBP12.36□□□□□ -0.43
USF1-203ENST00000368021 ASAH2Q9NR71 780 aa12.36□□□□□ -0.43
USF1-203ENST00000368021 TTC28Q96AY4 2481 aa12.36□□□□□ -0.43
USF1-203ENST00000368021 FSBPO95073 299 aa12.35□□□□□ -0.43
USF1-203ENST00000368021 POU2F2P09086 479 aa12.35□□□□□ -0.43
USF1-203ENST00000368021 HNRNPA1P09651 372 aaKnown RBP eCLIP12.35□□□□□ -0.43
USF1-203ENST00000368021 BMP1P13497 986 aa12.35□□□□□ -0.43
USF1-203ENST00000368021 TACR2P21452 398 aa12.35□□□□□ -0.43
USF1-203ENST00000368021 SP100P23497 879 aaPredicted RBP12.35□□□□□ -0.43
USF1-203ENST00000368021 SLC8A1P32418 973 aa12.35□□□□□ -0.43
USF1-203ENST00000368021 NDST2P52849 883 aa12.35□□□□□ -0.43
USF1-203ENST00000368021 EPHA5P54756 1037 aa12.35□□□□□ -0.43
USF1-203ENST00000368021 BASP1P80723 227 aaKnown RBP12.35□□□□□ -0.43
USF1-203ENST00000368021 IFFO1Q0D2I5 559 aa12.35□□□□□ -0.43
USF1-203ENST00000368021 UAP1Q16222 522 aaPredicted RBP12.35□□□□□ -0.43
USF1-203ENST00000368021 FAM133BQ5BKY9 247 aaKnown RBP12.35□□□□□ -0.43
USF1-203ENST00000368021 CFAP58Q5T655 872 aa12.35□□□□□ -0.43
USF1-203ENST00000368021 RAP1GAP2Q684P5 730 aa12.35□□□□□ -0.43
USF1-203ENST00000368021 CHSY1Q86X52 802 aa12.35□□□□□ -0.43
USF1-203ENST00000368021 ARHGAP12Q8IWW6 846 aa12.35□□□□□ -0.43
USF1-203ENST00000368021 TP53INP2Q8IXH6 220 aa12.35□□□□□ -0.43
USF1-203ENST00000368021 CCDC33Q8N5R6 958 aa12.35□□□□□ -0.43
USF1-203ENST00000368021 CCDC110Q8TBZ0 833 aa12.35□□□□□ -0.43
USF1-203ENST00000368021 ZFRQ96KR1 1074 aaKnown RBP12.35□□□□□ -0.43
USF1-203ENST00000368021 NECAB3Q96P71 396 aaPredicted RBP12.35□□□□□ -0.43
USF1-203ENST00000368021 GCNAQ96QF7 691 aa12.35□□□□□ -0.43
USF1-203ENST00000368021 VAT1Q99536 393 aa12.35□□□□□ -0.43
USF1-203ENST00000368021 FRMD8Q9BZ67 464 aaPredicted RBP12.35□□□□□ -0.43
USF1-203ENST00000368021 RAB6BQ9NRW1 208 aa12.35□□□□□ -0.43
USF1-203ENST00000368021 MPP6Q9NZW5 540 aa12.35□□□□□ -0.43
USF1-203ENST00000368021 STOML2Q9UJZ1 356 aa12.35□□□□□ -0.43
USF1-203ENST00000368021 MYO18AQ92614 2054 aaKnown RBP12.35□□□□□ -0.43
USF1-203ENST00000368021 CCDC195A0A1B0GUA6 201 aa12.34□□□□□ -0.43
USF1-203ENST00000368021 GRXCR2A6NFK2 248 aa12.34□□□□□ -0.43
USF1-203ENST00000368021 F5H5T6 163 aa12.34□□□□□ -0.43
USF1-203ENST00000368021 RNF103O00237 685 aa12.34□□□□□ -0.43
USF1-203ENST00000368021 MBTPS2O43462 519 aa12.34□□□□□ -0.43
USF1-203ENST00000368021 SHOX2O60902 331 aaPredicted RBP12.34□□□□□ -0.43
USF1-203ENST00000368021 NEBLO76041 1014 aa12.34□□□□□ -0.43
USF1-203ENST00000368021 MBL2P11226 248 aaPredicted RBP12.34□□□□□ -0.43
USF1-203ENST00000368021 HDCP19113 662 aa12.34□□□□□ -0.43
USF1-203ENST00000368021 CCNCP24863 283 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms