RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 SH2D7A6NKC9 451 aaPredicted RBP4.86□□□□□ -1.63
CCDC54-201ENST00000261058 A6NLC8 198 aa4.86□□□□□ -1.63
CCDC54-201ENST00000261058 PEX12O00623 359 aa4.86□□□□□ -1.63
CCDC54-201ENST00000261058 TP73O15350 636 aa4.86□□□□□ -1.63
CCDC54-201ENST00000261058 CCNT1O60563 726 aaKnown RBP4.86□□□□□ -1.63
CCDC54-201ENST00000261058 CNOT3O75175 753 aaKnown RBP4.86□□□□□ -1.63
CCDC54-201ENST00000261058 CELA2AP08217 269 aa4.86□□□□□ -1.63
CCDC54-201ENST00000261058 HNRNPA1P09651 372 aaKnown RBP eCLIP4.86□□□□□ -1.63
CCDC54-201ENST00000261058 XBP1P17861 261 aa4.86□□□□□ -1.63
CCDC54-201ENST00000261058 FBLP22087 321 aaKnown RBP4.86□□□□□ -1.63
CCDC54-201ENST00000261058 DDIT3P35638 169 aa4.86□□□□□ -1.63
CCDC54-201ENST00000261058 HNF1BP35680 557 aa4.86□□□□□ -1.63
CCDC54-201ENST00000261058 BYSLQ13895 437 aaKnown RBP4.86□□□□□ -1.63
CCDC54-201ENST00000261058 RALBP1Q15311 655 aa4.86□□□□□ -1.63
CCDC54-201ENST00000261058 PRICKLE4Q2TBC4 344 aa4.86□□□□□ -1.63
CCDC54-201ENST00000261058 C10orf76Q5T2E6 689 aa4.86□□□□□ -1.63
CCDC54-201ENST00000261058 RNF144BQ7Z419 303 aa4.86□□□□□ -1.63
CCDC54-201ENST00000261058 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.86□□□□□ -1.63
CCDC54-201ENST00000261058 NEK8Q86SG6 692 aa4.86□□□□□ -1.63
CCDC54-201ENST00000261058 HEATR4Q86WZ0 1026 aa4.86□□□□□ -1.63
CCDC54-201ENST00000261058 KLBQ86Z14 1044 aa4.86□□□□□ -1.63
CCDC54-201ENST00000261058 VPS52Q8N1B4 723 aa4.86□□□□□ -1.63
CCDC54-201ENST00000261058 TEX19Q8NA77 164 aa4.86□□□□□ -1.63
CCDC54-201ENST00000261058 NCSTNQ92542 709 aa4.86□□□□□ -1.63
CCDC54-201ENST00000261058 IP6K1Q92551 441 aa4.86□□□□□ -1.63
CCDC54-201ENST00000261058 KAT2AQ92830 837 aa4.86□□□□□ -1.63
CCDC54-201ENST00000261058 HVCN1Q96D96 273 aa4.86□□□□□ -1.63
CCDC54-201ENST00000261058 CLMNQ96JQ2 1002 aa4.86□□□□□ -1.63
CCDC54-201ENST00000261058 FRG2BQ96QU4 278 aa4.86□□□□□ -1.63
CCDC54-201ENST00000261058 SEC62Q99442 399 aaKnown RBP4.86□□□□□ -1.63
CCDC54-201ENST00000261058 ARL15Q9NXU5 204 aa4.86□□□□□ -1.63
CCDC54-201ENST00000261058 KLHL13Q9P2N7 655 aa4.86□□□□□ -1.63
CCDC54-201ENST00000261058 C11orf21Q9P2W6 132 aa4.86□□□□□ -1.63
CCDC54-201ENST00000261058 UPB1Q9UBR1 384 aa4.86□□□□□ -1.63
CCDC54-201ENST00000261058 SLC25A13Q9UJS0 675 aa4.86□□□□□ -1.63
CCDC54-201ENST00000261058 SMIM35A0A1B0GVV1 85 aa4.85□□□□□ -1.63
CCDC54-201ENST00000261058 ANP32CO43423 234 aa4.85□□□□□ -1.63
CCDC54-201ENST00000261058 TULP3O75386 442 aa4.85□□□□□ -1.63
CCDC54-201ENST00000261058 HLA-DQA2P01906 255 aa4.85□□□□□ -1.63
CCDC54-201ENST00000261058 CD63P08962 238 aa4.85□□□□□ -1.63
CCDC54-201ENST00000261058 GSTM2P28161 218 aa4.85□□□□□ -1.63
CCDC54-201ENST00000261058 STAT1P42224 750 aa4.85□□□□□ -1.63
CCDC54-201ENST00000261058 SSBP2P81877 361 aaPredicted RBP4.85□□□□□ -1.63
CCDC54-201ENST00000261058 MPP1Q00013 466 aa4.85□□□□□ -1.63
CCDC54-201ENST00000261058 SH2D4BQ5SQS7 431 aa4.85□□□□□ -1.63
CCDC54-201ENST00000261058 SLC9C2Q5TAH2 1124 aa4.85□□□□□ -1.63
CCDC54-201ENST00000261058 NAPEPLDQ6IQ20 393 aa4.85□□□□□ -1.63
CCDC54-201ENST00000261058 SETD9Q8NE22 299 aa4.85□□□□□ -1.63
CCDC54-201ENST00000261058 ST8SIA4Q92187 359 aa4.85□□□□□ -1.63
CCDC54-201ENST00000261058 STAMQ92783 540 aa4.85□□□□□ -1.63
CCDC54-201ENST00000261058 ZBTB10Q96DT7 871 aa4.85□□□□□ -1.63
CCDC54-201ENST00000261058 MPP4Q96JB8 637 aa4.85□□□□□ -1.63
CCDC54-201ENST00000261058 SH2D3AQ9BRG2 576 aa4.85□□□□□ -1.63
CCDC54-201ENST00000261058 LMAN2LQ9H0V9 348 aa4.85□□□□□ -1.63
CCDC54-201ENST00000261058 UNC45AQ9H3U1 944 aa4.85□□□□□ -1.63
CCDC54-201ENST00000261058 JMJD4Q9H9V9 463 aa4.85□□□□□ -1.63
CCDC54-201ENST00000261058 SLC25A10Q9UBX3 287 aaPredicted RBP4.85□□□□□ -1.63
CCDC54-201ENST00000261058 FBXO4Q9UKT5 387 aa4.85□□□□□ -1.63
CCDC54-201ENST00000261058 OSGIN2Q9Y236 505 aa4.85□□□□□ -1.63
CCDC54-201ENST00000261058 TNFSF13BQ9Y275 285 aa4.85□□□□□ -1.63
CCDC54-201ENST00000261058 GOLGA6L10A0A0M3HER8 536 aa4.84□□□□□ -1.63
CCDC54-201ENST00000261058 TMEM247A6NEH6 219 aa4.84□□□□□ -1.63
CCDC54-201ENST00000261058 E5RJQ4 531 aa4.84□□□□□ -1.63
CCDC54-201ENST00000261058 SYN3O14994 580 aa4.84□□□□□ -1.63
CCDC54-201ENST00000261058 NEURL1O76050 574 aa4.84□□□□□ -1.63
CCDC54-201ENST00000261058 CENPBP07199 599 aaPredicted RBP4.84□□□□□ -1.63
CCDC54-201ENST00000261058 IFIT1P09914 478 aaKnown RBP4.84□□□□□ -1.63
CCDC54-201ENST00000261058 WEE2P0C1S8 567 aa4.84□□□□□ -1.63
CCDC54-201ENST00000261058 CTSAP10619 480 aa4.84□□□□□ -1.63
CCDC54-201ENST00000261058 EPHB2P29323 1055 aa4.84□□□□□ -1.63
CCDC54-201ENST00000261058 PGM1P36871 562 aa4.84□□□□□ -1.63
CCDC54-201ENST00000261058 GPD2P43304 727 aa4.84□□□□□ -1.63
CCDC54-201ENST00000261058 NANOS3P60323 173 aaKnown RBP4.84□□□□□ -1.63
CCDC54-201ENST00000261058 RPS13P62277 151 aaKnown RBP4.84□□□□□ -1.63
CCDC54-201ENST00000261058 SLC9C1Q4G0N8 1177 aa4.84□□□□□ -1.63
CCDC54-201ENST00000261058 ARL13AQ5H913 290 aaPredicted RBP4.84□□□□□ -1.63
CCDC54-201ENST00000261058 FAM57BQ71RH2 274 aa4.84□□□□□ -1.63
CCDC54-201ENST00000261058 PAF1Q8N7H5 531 aa4.84□□□□□ -1.63
CCDC54-201ENST00000261058 PCYOX1LQ8NBM8 494 aa4.84□□□□□ -1.63
CCDC54-201ENST00000261058 HDAC7Q8WUI4 952 aa4.84□□□□□ -1.63
CCDC54-201ENST00000261058 ELP4Q96EB1 424 aa4.84□□□□□ -1.63
CCDC54-201ENST00000261058 SIGLEC11Q96RL6 698 aa4.84□□□□□ -1.63
CCDC54-201ENST00000261058 NPLQ9BXD5 320 aaPredicted RBP4.84□□□□□ -1.63
CCDC54-201ENST00000261058 QTRT1Q9BXR0 403 aaKnown RBP4.84□□□□□ -1.63
CCDC54-201ENST00000261058 PRSS22Q9GZN4 317 aa4.84□□□□□ -1.63
CCDC54-201ENST00000261058 ACAD9Q9H845 621 aa4.84□□□□□ -1.63
CCDC54-201ENST00000261058 PAPOLBQ9NRJ5 636 aaKnown RBP4.84□□□□□ -1.63
CCDC54-201ENST00000261058 TERF2IPQ9NYB0 399 aa4.84□□□□□ -1.63
CCDC54-201ENST00000261058 AGO2Q9UKV8 859 aaKnown RBP4.84□□□□□ -1.63
CCDC54-201ENST00000261058 SUFUQ9UMX1 484 aa4.84□□□□□ -1.63
CCDC54-201ENST00000261058 CLDN16Q9Y5I7 305 aa4.84□□□□□ -1.63
CCDC54-201ENST00000261058 ZNF335Q9H4Z2 1342 aaPredicted RBP4.84□□□□□ -1.63
CCDC54-201ENST00000261058 TRBV5-3A0A0A0MS03 114 aa4.83□□□□□ -1.64
CCDC54-201ENST00000261058 CXorf65A6NEN9 183 aa4.83□□□□□ -1.64
CCDC54-201ENST00000261058 GAGE10A6NGK3 116 aa4.83□□□□□ -1.64
CCDC54-201ENST00000261058 OVOL3O00110 214 aa4.83□□□□□ -1.64
CCDC54-201ENST00000261058 SH3BP5O60239 455 aa4.83□□□□□ -1.64
CCDC54-201ENST00000261058 GUCY1B2O75343 617 aa4.83□□□□□ -1.64
CCDC54-201ENST00000261058 LCKP06239 509 aa4.83□□□□□ -1.64
CCDC54-201ENST00000261058 MPGP29372 298 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms