RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 H0Y626 953 aa19.06■□□□□ 0.64
SSBP4-212ENST00000601919 H3BQ06 376 aaPredicted RBP19.06■□□□□ 0.64
SSBP4-212ENST00000601919 SGK1O00141 431 aa19.06■□□□□ 0.64
SSBP4-212ENST00000601919 DFFAO00273 331 aa19.06■□□□□ 0.64
SSBP4-212ENST00000601919 STK10O94804 968 aaKnown RBP19.06■□□□□ 0.64
SSBP4-212ENST00000601919 LUC7L3O95232 432 aaKnown RBP19.06■□□□□ 0.64
SSBP4-212ENST00000601919 ACTN2P35609 894 aa19.06■□□□□ 0.64
SSBP4-212ENST00000601919 GARSP41250 739 aaKnown RBP19.06■□□□□ 0.64
SSBP4-212ENST00000601919 VIPR2P41587 438 aa19.06■□□□□ 0.64
SSBP4-212ENST00000601919 KCNJ1P48048 391 aa19.06■□□□□ 0.64
SSBP4-212ENST00000601919 CDH18Q13634 790 aa19.06■□□□□ 0.64
SSBP4-212ENST00000601919 POLD3Q15054 466 aaPredicted RBP19.06■□□□□ 0.64
SSBP4-212ENST00000601919 PDGFRLQ15198 375 aa19.06■□□□□ 0.64
SSBP4-212ENST00000601919 PPP1R7Q15435 360 aa19.06■□□□□ 0.64
SSBP4-212ENST00000601919 HEATR6Q6AI08 1181 aaKnown RBP19.06■□□□□ 0.64
SSBP4-212ENST00000601919 CIR1Q86X95 450 aaPredicted RBP19.06■□□□□ 0.64
SSBP4-212ENST00000601919 YAF2Q8IY57 180 aa19.06■□□□□ 0.64
SSBP4-212ENST00000601919 ATPAF2Q8N5M1 289 aa19.06■□□□□ 0.64
SSBP4-212ENST00000601919 CCNYQ8ND76 341 aa19.06■□□□□ 0.64
SSBP4-212ENST00000601919 IRF7Q92985 503 aa19.06■□□□□ 0.64
SSBP4-212ENST00000601919 HLA-CQ95604 372 aa19.06■□□□□ 0.64
SSBP4-212ENST00000601919 ELSPBP1Q96BH3 223 aa19.06■□□□□ 0.64
SSBP4-212ENST00000601919 HDAC11Q96DB2 347 aa19.06■□□□□ 0.64
SSBP4-212ENST00000601919 MYEOVQ96EZ4 313 aa19.06■□□□□ 0.64
SSBP4-212ENST00000601919 CELF6Q96J87 481 aaKnown RBP19.06■□□□□ 0.64
SSBP4-212ENST00000601919 GUCD1Q96NT3 240 aa19.06■□□□□ 0.64
SSBP4-212ENST00000601919 KLC2Q9H0B6 622 aa19.06■□□□□ 0.64
SSBP4-212ENST00000601919 RAB17Q9H0T7 212 aa19.06■□□□□ 0.64
SSBP4-212ENST00000601919 MAGEH1Q9H213 219 aa19.06■□□□□ 0.64
SSBP4-212ENST00000601919 EPS15L1Q9UBC2 864 aa19.06■□□□□ 0.64
SSBP4-212ENST00000601919 ZNF212Q9UDV6 495 aa19.06■□□□□ 0.64
SSBP4-212ENST00000601919 ILVBLA1L0T0 632 aa19.05■□□□□ 0.64
SSBP4-212ENST00000601919 RAD51CO43502 376 aa19.05■□□□□ 0.64
SSBP4-212ENST00000601919 MAP3K6O95382 1288 aa19.05■□□□□ 0.64
SSBP4-212ENST00000601919 RHOCP08134 193 aa19.05■□□□□ 0.64
SSBP4-212ENST00000601919 SGSHP51688 502 aa19.05■□□□□ 0.64
SSBP4-212ENST00000601919 PPIDQ08752 370 aaKnown RBP19.05■□□□□ 0.64
SSBP4-212ENST00000601919 AP1B1Q10567 949 aa19.05■□□□□ 0.64
SSBP4-212ENST00000601919 TIGD7Q6NT04 549 aaPredicted RBP19.05■□□□□ 0.64
SSBP4-212ENST00000601919 TPGS1Q6ZTW0 290 aa19.05■□□□□ 0.64
SSBP4-212ENST00000601919 ARHGAP12Q8IWW6 846 aa19.05■□□□□ 0.64
SSBP4-212ENST00000601919 CARNMT1Q8N4J0 409 aa19.05■□□□□ 0.64
SSBP4-212ENST00000601919 ALLCQ8N6M5 410 aa19.05■□□□□ 0.64
SSBP4-212ENST00000601919 CCDC89Q8N998 374 aa19.05■□□□□ 0.64
SSBP4-212ENST00000601919 RIN3Q8TB24 985 aa19.05■□□□□ 0.64
SSBP4-212ENST00000601919 DEPDC1BQ8WUY9 529 aa19.05■□□□□ 0.64
SSBP4-212ENST00000601919 ATP2A3Q93084 1043 aa19.05■□□□□ 0.64
SSBP4-212ENST00000601919 TSGA13Q96PP4 275 aa19.05■□□□□ 0.64
SSBP4-212ENST00000601919 TMEM121Q9BTD3 319 aa19.05■□□□□ 0.64
SSBP4-212ENST00000601919 LRRC1Q9BTT6 524 aa19.05■□□□□ 0.64
SSBP4-212ENST00000601919 SLC39A8Q9C0K1 460 aa19.05■□□□□ 0.64
SSBP4-212ENST00000601919 SPHK2Q9NRA0 654 aa19.05■□□□□ 0.64
SSBP4-212ENST00000601919 TBC1D30Q9Y2I9 924 aa19.05■□□□□ 0.64
SSBP4-212ENST00000601919 UTP11Q9Y3A2 253 aaKnown RBP19.05■□□□□ 0.64
SSBP4-212ENST00000601919 WNT6Q9Y6F9 365 aa19.05■□□□□ 0.64
SSBP4-212ENST00000601919 RASA4BC9J798 803 aa19.04■□□□□ 0.64
SSBP4-212ENST00000601919 RASA4O43374 803 aa19.04■□□□□ 0.64
SSBP4-212ENST00000601919 ECI2O75521 394 aa19.04■□□□□ 0.64
SSBP4-212ENST00000601919 NFATC1O95644 943 aa19.04■□□□□ 0.64
SSBP4-212ENST00000601919 ADH1CP00326 375 aa19.04■□□□□ 0.64
SSBP4-212ENST00000601919 FCARP24071 287 aa19.04■□□□□ 0.64
SSBP4-212ENST00000601919 CCNCP24863 283 aa19.04■□□□□ 0.64
SSBP4-212ENST00000601919 GNA12Q03113 381 aa19.04■□□□□ 0.64
SSBP4-212ENST00000601919 PRKD1Q15139 912 aaPredicted RBP19.04■□□□□ 0.64
SSBP4-212ENST00000601919 TANGO2Q6ICL3 276 aa19.04■□□□□ 0.64
SSBP4-212ENST00000601919 JAMLQ86YT9 394 aa19.04■□□□□ 0.64
SSBP4-212ENST00000601919 MFN1Q8IWA4 741 aa19.04■□□□□ 0.64
SSBP4-212ENST00000601919 MFSD6LQ8IWD5 586 aa19.04■□□□□ 0.64
SSBP4-212ENST00000601919 ADGRG2Q8IZP9 1017 aa19.04■□□□□ 0.64
SSBP4-212ENST00000601919 PPM1EQ8WY54 764 aa19.04■□□□□ 0.64
SSBP4-212ENST00000601919 RUBCNQ92622 972 aa19.04■□□□□ 0.64
SSBP4-212ENST00000601919 RSPRY1Q96DX4 576 aa19.04■□□□□ 0.64
SSBP4-212ENST00000601919 BBS2Q9BXC9 721 aa19.04■□□□□ 0.64
SSBP4-212ENST00000601919 BRWD1Q9NSI6 2320 aa19.04■□□□□ 0.64
SSBP4-212ENST00000601919 NDFIP2Q9NV92 336 aa19.04■□□□□ 0.64
SSBP4-212ENST00000601919 MARK1Q9P0L2 795 aa19.04■□□□□ 0.64
SSBP4-212ENST00000601919 HPCAL4Q9UM19 191 aa19.04■□□□□ 0.64
SSBP4-212ENST00000601919 CHD5Q8TDI0 1954 aa19.04■□□□□ 0.64
SSBP4-212ENST00000601919 KIF26AQ9ULI4 1882 aaPredicted RBP19.03■□□□□ 0.64
SSBP4-212ENST00000601919 SHROOM3Q8TF72 1996 aa19.03■□□□□ 0.64
SSBP4-212ENST00000601919 TARSL2A2RTX5 802 aaKnown RBP19.03■□□□□ 0.64
SSBP4-212ENST00000601919 KCNN4O15554 427 aa19.03■□□□□ 0.64
SSBP4-212ENST00000601919 TTI1O43156 1089 aa19.03■□□□□ 0.64
SSBP4-212ENST00000601919 MBTPS2O43462 519 aa19.03■□□□□ 0.64
SSBP4-212ENST00000601919 PENKP01210 267 aaPredicted RBP19.03■□□□□ 0.64
SSBP4-212ENST00000601919 TUBBP07437 444 aa19.03■□□□□ 0.64
SSBP4-212ENST00000601919 RHOXF2BP0C7M4 288 aa19.03■□□□□ 0.64
SSBP4-212ENST00000601919 PSMC3P17980 439 aa19.03■□□□□ 0.64
SSBP4-212ENST00000601919 HOXD9P28356 352 aaPredicted RBP19.03■□□□□ 0.64
SSBP4-212ENST00000601919 PTGIRP43119 386 aa19.03■□□□□ 0.64
SSBP4-212ENST00000601919 PAPOLAP51003 745 aaKnown RBP19.03■□□□□ 0.64
SSBP4-212ENST00000601919 ANO4Q32M45 955 aa19.03■□□□□ 0.64
SSBP4-212ENST00000601919 C4orf22Q6V702 233 aa19.03■□□□□ 0.64
SSBP4-212ENST00000601919 ZNF354CQ86Y25 554 aa19.03■□□□□ 0.64
SSBP4-212ENST00000601919 CCDC13Q8IYE1 715 aa19.03■□□□□ 0.64
SSBP4-212ENST00000601919 NSMCE1Q8WV22 266 aa19.03■□□□□ 0.64
SSBP4-212ENST00000601919 HTR3CQ8WXA8 447 aa19.03■□□□□ 0.64
SSBP4-212ENST00000601919 LRRC3BQ96PB8 259 aa19.03■□□□□ 0.64
SSBP4-212ENST00000601919 LGMNQ99538 433 aa19.03■□□□□ 0.64
SSBP4-212ENST00000601919 RHOXF2Q9BQY4 288 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms