RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 ACSL1P33121 698 aa10.83□□□□□ -0.68
CCDC9-203ENST00000596938 RDXP35241 583 aaKnown RBP10.83□□□□□ -0.68
CCDC9-203ENST00000596938 PTP4A2Q12974 167 aa10.83□□□□□ -0.68
CCDC9-203ENST00000596938 RNF219Q5W0B1 726 aaPredicted RBP10.83□□□□□ -0.68
CCDC9-203ENST00000596938 TRNP1Q6NT89 227 aa10.83□□□□□ -0.68
CCDC9-203ENST00000596938 LRRC31Q6UY01 552 aa10.83□□□□□ -0.68
CCDC9-203ENST00000596938 USP30Q70CQ3 517 aa10.83□□□□□ -0.68
CCDC9-203ENST00000596938 CIR1Q86X95 450 aaPredicted RBP10.83□□□□□ -0.68
CCDC9-203ENST00000596938 DHX40Q8IX18 779 aaKnown RBP10.83□□□□□ -0.68
CCDC9-203ENST00000596938 C1orf216Q8TAB5 229 aa10.83□□□□□ -0.68
CCDC9-203ENST00000596938 SLC30A5Q8TAD4 765 aa10.83□□□□□ -0.68
CCDC9-203ENST00000596938 PTPRN2Q92932 1015 aa10.83□□□□□ -0.68
CCDC9-203ENST00000596938 RPL10LQ96L21 214 aaKnown RBP10.83□□□□□ -0.68
CCDC9-203ENST00000596938 PCDHB18PQ96TA0 734 aa10.83□□□□□ -0.68
CCDC9-203ENST00000596938 FAM129BQ96TA1 746 aa10.83□□□□□ -0.68
CCDC9-203ENST00000596938 ZDHHC5Q9C0B5 715 aa10.83□□□□□ -0.68
CCDC9-203ENST00000596938 BTBD1Q9H0C5 482 aa10.83□□□□□ -0.68
CCDC9-203ENST00000596938 MTG2Q9H4K7 406 aa10.83□□□□□ -0.68
CCDC9-203ENST00000596938 SGK2Q9HBY8 427 aa10.83□□□□□ -0.68
CCDC9-203ENST00000596938 RTN4Q9NQC3 1192 aaKnown RBP10.83□□□□□ -0.68
CCDC9-203ENST00000596938 MYO6Q9UM54 1294 aa10.83□□□□□ -0.68
CCDC9-203ENST00000596938 NCKAP1Q9Y2A7 1128 aa10.83□□□□□ -0.68
CCDC9-203ENST00000596938 ATXN2Q99700 1313 aaKnown RBP10.83□□□□□ -0.68
CCDC9-203ENST00000596938 IGLV3-10A0A075B6K4 115 aa10.82□□□□□ -0.68
CCDC9-203ENST00000596938 A0A1B0GTW7 788 aa10.82□□□□□ -0.68
CCDC9-203ENST00000596938 C2CD4BA6NLJ0 364 aa10.82□□□□□ -0.68
CCDC9-203ENST00000596938 MEI4A8MW99 385 aa10.82□□□□□ -0.68
CCDC9-203ENST00000596938 TEX33O43247 280 aa10.82□□□□□ -0.68
CCDC9-203ENST00000596938 ATP9BO43861 1147 aa10.82□□□□□ -0.68
CCDC9-203ENST00000596938 MAOBP27338 520 aa10.82□□□□□ -0.68
CCDC9-203ENST00000596938 ZNF165P49910 485 aa10.82□□□□□ -0.68
CCDC9-203ENST00000596938 IRAK1P51617 712 aa10.82□□□□□ -0.68
CCDC9-203ENST00000596938 ATXN3P54252 364 aaPredicted RBP10.82□□□□□ -0.68
CCDC9-203ENST00000596938 GSCP56915 257 aaPredicted RBP10.82□□□□□ -0.68
CCDC9-203ENST00000596938 CENPCQ03188 943 aa10.82□□□□□ -0.68
CCDC9-203ENST00000596938 CST6Q15828 149 aa10.82□□□□□ -0.68
CCDC9-203ENST00000596938 CLEC16AQ2KHT3 1053 aa10.82□□□□□ -0.68
CCDC9-203ENST00000596938 CCDC14Q49A88 953 aa10.82□□□□□ -0.68
CCDC9-203ENST00000596938 TTC31Q49AM3 519 aaPredicted RBP10.82□□□□□ -0.68
CCDC9-203ENST00000596938 ARTNQ5T4W7 220 aa10.82□□□□□ -0.68
CCDC9-203ENST00000596938 DCAF12L1Q5VU92 463 aa10.82□□□□□ -0.68
CCDC9-203ENST00000596938 CAVIN1Q6NZI2 390 aaKnown RBP10.82□□□□□ -0.68
CCDC9-203ENST00000596938 IRF2BP2Q7Z5L9 587 aa10.82□□□□□ -0.68
CCDC9-203ENST00000596938 SETD3Q86TU7 594 aaPredicted RBP10.82□□□□□ -0.68
CCDC9-203ENST00000596938 FAM124AQ86V42 546 aa10.82□□□□□ -0.68
CCDC9-203ENST00000596938 PHF13Q86YI8 300 aaPredicted RBP10.82□□□□□ -0.68
CCDC9-203ENST00000596938 OR52K2Q8NGK3 314 aa10.82□□□□□ -0.68
CCDC9-203ENST00000596938 FRS2Q8WU20 508 aa10.82□□□□□ -0.68
CCDC9-203ENST00000596938 RXFP2Q8WXD0 754 aa10.82□□□□□ -0.68
CCDC9-203ENST00000596938 CENPIQ92674 756 aaPredicted RBP10.82□□□□□ -0.68
CCDC9-203ENST00000596938 CFAP57Q96MR6 1250 aa10.82□□□□□ -0.68
CCDC9-203ENST00000596938 AGPAT1Q99943 283 aa10.82□□□□□ -0.68
CCDC9-203ENST00000596938 PABPC3Q9H361 631 aaKnown RBP10.82□□□□□ -0.68
CCDC9-203ENST00000596938 RETREG1Q9H6L5 497 aa10.82□□□□□ -0.68
CCDC9-203ENST00000596938 OSGEPQ9NPF4 335 aa10.82□□□□□ -0.68
CCDC9-203ENST00000596938 ADAM22Q9P0K1 906 aa10.82□□□□□ -0.68
CCDC9-203ENST00000596938 NCOR2Q9Y618 2525 aa10.82□□□□□ -0.68
CCDC9-203ENST00000596938 SPAG17Q6Q759 2223 aa10.81□□□□□ -0.68
CCDC9-203ENST00000596938 SIGLEC16A6NMB1 481 aa10.81□□□□□ -0.68
CCDC9-203ENST00000596938 E9PAM4 449 aa10.81□□□□□ -0.68
CCDC9-203ENST00000596938 BCAT2O15382 392 aaPredicted RBP10.81□□□□□ -0.68
CCDC9-203ENST00000596938 CNTN5O94779 1100 aa10.81□□□□□ -0.68
CCDC9-203ENST00000596938 SEMA4FO95754 770 aa10.81□□□□□ -0.68
CCDC9-203ENST00000596938 CALB1P05937 261 aa10.81□□□□□ -0.68
CCDC9-203ENST00000596938 KRT3P12035 628 aa10.81□□□□□ -0.68
CCDC9-203ENST00000596938 CEACAM1P13688 526 aa10.81□□□□□ -0.68
CCDC9-203ENST00000596938 FERP16591 822 aa10.81□□□□□ -0.68
CCDC9-203ENST00000596938 C5AR1P21730 350 aa10.81□□□□□ -0.68
CCDC9-203ENST00000596938 SDC4P31431 198 aa10.81□□□□□ -0.68
CCDC9-203ENST00000596938 SLC8A1P32418 973 aa10.81□□□□□ -0.68
CCDC9-203ENST00000596938 ADRA1BP35368 520 aa10.81□□□□□ -0.68
CCDC9-203ENST00000596938 GGCXP38435 758 aa10.81□□□□□ -0.68
CCDC9-203ENST00000596938 PTPN9P43378 593 aa10.81□□□□□ -0.68
CCDC9-203ENST00000596938 MAPK8P45983 427 aa10.81□□□□□ -0.68
CCDC9-203ENST00000596938 NSFP46459 744 aaKnown RBP10.81□□□□□ -0.68
CCDC9-203ENST00000596938 KRT83P78385 493 aa10.81□□□□□ -0.68
CCDC9-203ENST00000596938 C1QBPQ07021 282 aaKnown RBP10.81□□□□□ -0.68
CCDC9-203ENST00000596938 SEMA3BQ13214 749 aa10.81□□□□□ -0.68
CCDC9-203ENST00000596938 SLC14A1Q13336 389 aa10.81□□□□□ -0.68
CCDC9-203ENST00000596938 ELAVL3Q14576 367 aaKnown RBP10.81□□□□□ -0.68
CCDC9-203ENST00000596938 FILIP1LQ4L180 1135 aa10.81□□□□□ -0.68
CCDC9-203ENST00000596938 N4BP2L1Q5TBK1 243 aaPredicted RBP10.81□□□□□ -0.68
CCDC9-203ENST00000596938 LRSAM1Q6UWE0 723 aa10.81□□□□□ -0.68
CCDC9-203ENST00000596938 STRADAQ7RTN6 431 aa10.81□□□□□ -0.68
CCDC9-203ENST00000596938 CACUL1Q86Y37 369 aa10.81□□□□□ -0.68
CCDC9-203ENST00000596938 MMAAQ8IVH4 418 aaKnown RBP10.81□□□□□ -0.68
CCDC9-203ENST00000596938 STK40Q8N2I9 435 aa10.81□□□□□ -0.68
CCDC9-203ENST00000596938 EMC1Q8N766 993 aa10.81□□□□□ -0.68
CCDC9-203ENST00000596938 C11orf70Q9BRQ4 267 aa10.81□□□□□ -0.68
CCDC9-203ENST00000596938 FUCA2Q9BTY2 467 aa10.81□□□□□ -0.68
CCDC9-203ENST00000596938 OSBPL2Q9H1P3 480 aa10.81□□□□□ -0.68
CCDC9-203ENST00000596938 C6orf106Q9H6K1 298 aaPredicted RBP10.81□□□□□ -0.68
CCDC9-203ENST00000596938 METTL5Q9NRN9 209 aaKnown RBP10.81□□□□□ -0.68
CCDC9-203ENST00000596938 DNAAF2Q9NVR5 837 aaKnown RBP10.81□□□□□ -0.68
CCDC9-203ENST00000596938 FBXL12Q9NXK8 326 aa10.81□□□□□ -0.68
CCDC9-203ENST00000596938 PPARGC1AQ9UBK2 798 aaKnown RBP10.81□□□□□ -0.68
CCDC9-203ENST00000596938 ADAMTS1Q9UHI8 967 aa10.81□□□□□ -0.68
CCDC9-203ENST00000596938 EIF2B4Q9UI10 523 aaKnown RBP10.81□□□□□ -0.68
CCDC9-203ENST00000596938 VPS28Q9UK41 221 aa10.81□□□□□ -0.68
CCDC9-203ENST00000596938 FZD4Q9ULV1 537 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms