RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 CDK11BP21127 795 aaKnown RBP19.49■□□□□ 0.71
COL5A1-203ENST00000460264 MMP8P22894 467 aa19.49■□□□□ 0.71
COL5A1-203ENST00000460264 STAT1P42224 750 aa19.49■□□□□ 0.71
COL5A1-203ENST00000460264 NUMBP49757 651 aa19.49■□□□□ 0.71
COL5A1-203ENST00000460264 STK19P49842 368 aaPredicted RBP19.49■□□□□ 0.71
COL5A1-203ENST00000460264 NOVA1P51513 510 aaKnown RBP19.49■□□□□ 0.71
COL5A1-203ENST00000460264 UBXN1Q04323 297 aa19.49■□□□□ 0.71
COL5A1-203ENST00000460264 N4BP2L1Q5TBK1 243 aaPredicted RBP19.49■□□□□ 0.71
COL5A1-203ENST00000460264 ZCCHC9Q8N567 271 aaKnown RBP19.49■□□□□ 0.71
COL5A1-203ENST00000460264 OR52K2Q8NGK3 314 aa19.49■□□□□ 0.71
COL5A1-203ENST00000460264 ALG14Q96F25 216 aa19.49■□□□□ 0.71
COL5A1-203ENST00000460264 RPL10LQ96L21 214 aaKnown RBP19.49■□□□□ 0.71
COL5A1-203ENST00000460264 PCMTD1Q96MG8 357 aaPredicted RBP19.49■□□□□ 0.71
COL5A1-203ENST00000460264 ERGIC2Q96RQ1 377 aa19.49■□□□□ 0.71
COL5A1-203ENST00000460264 PAXBP1Q9Y5B6 917 aa19.49■□□□□ 0.71
COL5A1-203ENST00000460264 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.48■□□□□ 0.71
COL5A1-203ENST00000460264 TARSL2A2RTX5 802 aaKnown RBP19.48■□□□□ 0.71
COL5A1-203ENST00000460264 CLDN11O75508 207 aa19.48■□□□□ 0.71
COL5A1-203ENST00000460264 ATP1A3P13637 1013 aa19.48■□□□□ 0.71
COL5A1-203ENST00000460264 ATXN3P54252 364 aaPredicted RBP19.48■□□□□ 0.71
COL5A1-203ENST00000460264 SULT2A1Q06520 285 aa19.48■□□□□ 0.71
COL5A1-203ENST00000460264 ZNF177Q13360 481 aaPredicted RBP19.48■□□□□ 0.71
COL5A1-203ENST00000460264 CST6Q15828 149 aa19.48■□□□□ 0.71
COL5A1-203ENST00000460264 ANO6Q4KMQ2 910 aa19.48■□□□□ 0.71
COL5A1-203ENST00000460264 SH3PXD2AQ5TCZ1 1133 aa19.48■□□□□ 0.71
COL5A1-203ENST00000460264 TRIM72Q6ZMU5 477 aa19.48■□□□□ 0.71
COL5A1-203ENST00000460264 ARCQ7LC44 396 aa19.48■□□□□ 0.71
COL5A1-203ENST00000460264 BNIPLQ7Z465 357 aa19.48■□□□□ 0.71
COL5A1-203ENST00000460264 ZNF683Q8IZ20 524 aa19.48■□□□□ 0.71
COL5A1-203ENST00000460264 MINDY1Q8N5J2 469 aa19.48■□□□□ 0.71
COL5A1-203ENST00000460264 OR2I1PQ8NGU4 316 aa19.48■□□□□ 0.71
COL5A1-203ENST00000460264 CFAP57Q96MR6 1250 aa19.48■□□□□ 0.71
COL5A1-203ENST00000460264 PABPC3Q9H361 631 aaKnown RBP19.48■□□□□ 0.71
COL5A1-203ENST00000460264 C6orf106Q9H6K1 298 aaPredicted RBP19.48■□□□□ 0.71
COL5A1-203ENST00000460264 METTL5Q9NRN9 209 aaKnown RBP19.48■□□□□ 0.71
COL5A1-203ENST00000460264 TMEM51Q9NW97 253 aa19.48■□□□□ 0.71
COL5A1-203ENST00000460264 SCML1Q9UN30 329 aa19.48■□□□□ 0.71
COL5A1-203ENST00000460264 SNX10Q9Y5X0 201 aa19.48■□□□□ 0.71
COL5A1-203ENST00000460264 TP53BP1Q12888 1972 aaPredicted RBP19.47■□□□□ 0.71
COL5A1-203ENST00000460264 A0A1B0GTW7 788 aa19.47■□□□□ 0.71
COL5A1-203ENST00000460264 GIPC1O14908 333 aa19.47■□□□□ 0.71
COL5A1-203ENST00000460264 RNASEH1O60930 286 aaKnown RBP19.47■□□□□ 0.71
COL5A1-203ENST00000460264 SEMA4FO95754 770 aa19.47■□□□□ 0.71
COL5A1-203ENST00000460264 SYPP08247 313 aa19.47■□□□□ 0.71
COL5A1-203ENST00000460264 CSRP1P21291 193 aaKnown RBP19.47■□□□□ 0.71
COL5A1-203ENST00000460264 USP30Q70CQ3 517 aa19.47■□□□□ 0.71
COL5A1-203ENST00000460264 SLC30A5Q8TAD4 765 aa19.47■□□□□ 0.71
COL5A1-203ENST00000460264 FEM1AQ9BSK4 669 aa19.47■□□□□ 0.71
COL5A1-203ENST00000460264 NAT10Q9H0A0 1025 aaKnown RBP19.47■□□□□ 0.71
COL5A1-203ENST00000460264 BTBD1Q9H0C5 482 aa19.47■□□□□ 0.71
COL5A1-203ENST00000460264 MIR1-1HGQ9H1L0 117 aa19.47■□□□□ 0.71
COL5A1-203ENST00000460264 TMPRSS4Q9NRS4 437 aa19.47■□□□□ 0.71
COL5A1-203ENST00000460264 EIF2B4Q9UI10 523 aaKnown RBP19.47■□□□□ 0.71
COL5A1-203ENST00000460264 TBC1D30Q9Y2I9 924 aa19.47■□□□□ 0.71
COL5A1-203ENST00000460264 ZBTB32Q9Y2Y4 487 aaPredicted RBP19.47■□□□□ 0.71
COL5A1-203ENST00000460264 OR51B4Q9Y5P0 310 aa19.47■□□□□ 0.71
COL5A1-203ENST00000460264 CHD8Q9HCK8 2581 aa19.47■□□□□ 0.71
COL5A1-203ENST00000460264 ACACBO00763 2458 aa19.47■□□□□ 0.71
COL5A1-203ENST00000460264 TPRP12270 2363 aaKnown RBP19.47■□□□□ 0.71
COL5A1-203ENST00000460264 PLXNA2O75051 1894 aa19.46■□□□□ 0.71
COL5A1-203ENST00000460264 MID1O15344 667 aa19.46■□□□□ 0.71
COL5A1-203ENST00000460264 BCAT2O15382 392 aaPredicted RBP19.46■□□□□ 0.71
COL5A1-203ENST00000460264 CNTN5O94779 1100 aa19.46■□□□□ 0.71
COL5A1-203ENST00000460264 RDXP35241 583 aaKnown RBP19.46■□□□□ 0.71
COL5A1-203ENST00000460264 NNMTP40261 264 aa19.46■□□□□ 0.71
COL5A1-203ENST00000460264 CDH4P55283 916 aa19.46■□□□□ 0.71
COL5A1-203ENST00000460264 GRIK2Q13002 908 aa19.46■□□□□ 0.71
COL5A1-203ENST00000460264 SEMA3BQ13214 749 aa19.46■□□□□ 0.71
COL5A1-203ENST00000460264 ALFQ53S48 1182 aa19.46■□□□□ 0.71
COL5A1-203ENST00000460264 ARTNQ5T4W7 220 aa19.46■□□□□ 0.71
COL5A1-203ENST00000460264 EMC1Q8N766 993 aa19.46■□□□□ 0.71
COL5A1-203ENST00000460264 C1orf216Q8TAB5 229 aa19.46■□□□□ 0.71
COL5A1-203ENST00000460264 SNX19Q92543 992 aa19.46■□□□□ 0.71
COL5A1-203ENST00000460264 PTPRN2Q92932 1015 aa19.46■□□□□ 0.71
COL5A1-203ENST00000460264 PPP1R9BQ96SB3 815 aa19.46■□□□□ 0.71
COL5A1-203ENST00000460264 PCDHB18PQ96TA0 734 aa19.46■□□□□ 0.71
COL5A1-203ENST00000460264 BPIFA3Q9BQP9 254 aa19.46■□□□□ 0.71
COL5A1-203ENST00000460264 C11orf70Q9BRQ4 267 aa19.46■□□□□ 0.71
COL5A1-203ENST00000460264 SGK2Q9HBY8 427 aa19.46■□□□□ 0.71
COL5A1-203ENST00000460264 SERGEFQ9UGK8 458 aa19.46■□□□□ 0.71
COL5A1-203ENST00000460264 VPS28Q9UK41 221 aa19.46■□□□□ 0.71
COL5A1-203ENST00000460264 OPHN1O60890 802 aa19.45■□□□□ 0.7
COL5A1-203ENST00000460264 UNGP13051 313 aaPredicted RBP19.45■□□□□ 0.7
COL5A1-203ENST00000460264 CEACAM1P13688 526 aa19.45■□□□□ 0.7
COL5A1-203ENST00000460264 VAV1P15498 845 aa19.45■□□□□ 0.7
COL5A1-203ENST00000460264 PMLP29590 882 aa19.45■□□□□ 0.7
COL5A1-203ENST00000460264 PSMD8P48556 350 aa19.45■□□□□ 0.7
COL5A1-203ENST00000460264 VASPP50552 380 aaPredicted RBP19.45■□□□□ 0.7
COL5A1-203ENST00000460264 PTP4A2Q12974 167 aa19.45■□□□□ 0.7
COL5A1-203ENST00000460264 ELAVL3Q14576 367 aaKnown RBP19.45■□□□□ 0.7
COL5A1-203ENST00000460264 ACBD5Q5T8D3 534 aaPredicted RBP19.45■□□□□ 0.7
COL5A1-203ENST00000460264 CAVIN1Q6NZI2 390 aaKnown RBP19.45■□□□□ 0.7
COL5A1-203ENST00000460264 FAM131BQ86XD5 332 aa19.45■□□□□ 0.7
COL5A1-203ENST00000460264 MMAAQ8IVH4 418 aaKnown RBP19.45■□□□□ 0.7
COL5A1-203ENST00000460264 STK40Q8N2I9 435 aa19.45■□□□□ 0.7
COL5A1-203ENST00000460264 HDDC3Q8N4P3 179 aa19.45■□□□□ 0.7
COL5A1-203ENST00000460264 DEFB124Q8NES8 71 aa19.45■□□□□ 0.7
COL5A1-203ENST00000460264 GANCQ8TET4 914 aa19.45■□□□□ 0.7
COL5A1-203ENST00000460264 FRS2Q8WU20 508 aa19.45■□□□□ 0.7
COL5A1-203ENST00000460264 C1orf74Q96LT6 269 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms