RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 NUDT12Q9BQG2 462 aa17.1■□□□□ 0.33
TSPAN3-201ENST00000267970 ADCY6O43306 1168 aa17.09■□□□□ 0.33
TSPAN3-201ENST00000267970 POC5Q8NA72 575 aa17.09■□□□□ 0.33
TSPAN3-201ENST00000267970 TBL1YQ9BQ87 522 aa17.09■□□□□ 0.33
TSPAN3-201ENST00000267970 RGS20O76081 388 aa17.09■□□□□ 0.33
TSPAN3-201ENST00000267970 CELF2O95319 508 aaKnown RBP17.09■□□□□ 0.33
TSPAN3-201ENST00000267970 LCA5LO95447 670 aa17.09■□□□□ 0.33
TSPAN3-201ENST00000267970 KRT6AP02538 564 aa17.09■□□□□ 0.33
TSPAN3-201ENST00000267970 CKBP12277 381 aa17.09■□□□□ 0.33
TSPAN3-201ENST00000267970 FCGR1AP12314 374 aa17.09■□□□□ 0.33
TSPAN3-201ENST00000267970 TYMPP19971 482 aa17.09■□□□□ 0.33
TSPAN3-201ENST00000267970 ZNF720Q7Z2F6 126 aa17.09■□□□□ 0.33
TSPAN3-201ENST00000267970 FBXO6Q9NRD1 293 aaPredicted RBP17.09■□□□□ 0.33
TSPAN3-201ENST00000267970 TRMT13Q9NUP7 481 aaKnown RBP17.09■□□□□ 0.33
TSPAN3-201ENST00000267970 SLC24A2Q9UI40 661 aa17.09■□□□□ 0.33
TSPAN3-201ENST00000267970 KANSL1LA0AUZ9 987 aa17.09■□□□□ 0.33
TSPAN3-201ENST00000267970 PNPLA4P41247 253 aa17.09■□□□□ 0.33
TSPAN3-201ENST00000267970 LAMTOR4Q0VGL1 99 aa17.09■□□□□ 0.33
TSPAN3-201ENST00000267970 SLC22A9Q8IVM8 553 aa17.09■□□□□ 0.33
TSPAN3-201ENST00000267970 CENPIQ92674 756 aaPredicted RBP17.09■□□□□ 0.33
TSPAN3-201ENST00000267970 RELTQ969Z4 430 aa17.09■□□□□ 0.33
TSPAN3-201ENST00000267970 APOL4Q9BPW4 351 aa17.09■□□□□ 0.33
TSPAN3-201ENST00000267970 ADGRE3Q9BY15 652 aa17.09■□□□□ 0.33
TSPAN3-201ENST00000267970 LRRC4BQ9NT99 713 aa17.09■□□□□ 0.33
TSPAN3-201ENST00000267970 TCEA3O75764 348 aa17.09■□□□□ 0.33
TSPAN3-201ENST00000267970 PSMA3P25788 255 aa17.09■□□□□ 0.33
TSPAN3-201ENST00000267970 ANXA11P50995 505 aaKnown RBP17.09■□□□□ 0.33
TSPAN3-201ENST00000267970 C15orf59Q2T9L4 293 aaPredicted RBP17.09■□□□□ 0.33
TSPAN3-201ENST00000267970 WDR60Q8WVS4 1066 aa17.09■□□□□ 0.33
TSPAN3-201ENST00000267970 CITED4Q96RK1 184 aa17.09■□□□□ 0.33
TSPAN3-201ENST00000267970 COPS4Q9BT78 406 aa17.09■□□□□ 0.33
TSPAN3-201ENST00000267970 TMEM138Q9NPI0 162 aa17.09■□□□□ 0.33
TSPAN3-201ENST00000267970 MBD2Q9UBB5 411 aa17.09■□□□□ 0.33
TSPAN3-201ENST00000267970 PLOD3O60568 738 aa17.09■□□□□ 0.33
TSPAN3-201ENST00000267970 MTRF1O75570 445 aaKnown RBP17.09■□□□□ 0.33
TSPAN3-201ENST00000267970 IFNA14P01570 189 aa17.09■□□□□ 0.33
TSPAN3-201ENST00000267970 FDX1P10109 184 aa17.09■□□□□ 0.33
TSPAN3-201ENST00000267970 CYP2C8P10632 490 aa17.09■□□□□ 0.33
TSPAN3-201ENST00000267970 RBM44Q6ZP01 1051 aaKnown RBP17.09■□□□□ 0.33
TSPAN3-201ENST00000267970 TPGS1Q6ZTW0 290 aa17.09■□□□□ 0.33
TSPAN3-201ENST00000267970 TP53INP1Q96A56 240 aa17.09■□□□□ 0.33
TSPAN3-201ENST00000267970 ZNF184Q99676 751 aaPredicted RBP17.09■□□□□ 0.33
TSPAN3-201ENST00000267970 A0A087X0B3 334 aa17.08■□□□□ 0.33
TSPAN3-201ENST00000267970 C19orf81C9J6K1 198 aa17.08■□□□□ 0.33
TSPAN3-201ENST00000267970 OR6A2O95222 327 aa17.08■□□□□ 0.33
TSPAN3-201ENST00000267970 MARC1Q5VT66 337 aa17.08■□□□□ 0.33
TSPAN3-201ENST00000267970 CDC73Q6P1J9 531 aa17.08■□□□□ 0.33
TSPAN3-201ENST00000267970 ZDHHC13Q8IUH4 622 aa17.08■□□□□ 0.33
TSPAN3-201ENST00000267970 SYT12Q8IV01 421 aa17.08■□□□□ 0.33
TSPAN3-201ENST00000267970 HTR3CQ8WXA8 447 aa17.08■□□□□ 0.33
TSPAN3-201ENST00000267970 WDR41Q9HAD4 459 aa17.08■□□□□ 0.33
TSPAN3-201ENST00000267970 KLQ9UEF7 1012 aa17.08■□□□□ 0.33
TSPAN3-201ENST00000267970 RAD54BQ9Y620 910 aa17.08■□□□□ 0.33
TSPAN3-201ENST00000267970 A8MUI8 341 aa17.08■□□□□ 0.33
TSPAN3-201ENST00000267970 SSNA1O43805 119 aa17.08■□□□□ 0.33
TSPAN3-201ENST00000267970 GUCY1B2O75343 617 aa17.08■□□□□ 0.33
TSPAN3-201ENST00000267970 COX7A2P14406 83 aa17.08■□□□□ 0.33
TSPAN3-201ENST00000267970 ADGRA1Q86SQ6 560 aa17.08■□□□□ 0.33
TSPAN3-201ENST00000267970 EXOC3L1Q86VI1 746 aa17.08■□□□□ 0.33
TSPAN3-201ENST00000267970 MECRQ9BV79 373 aa17.08■□□□□ 0.33
TSPAN3-201ENST00000267970 F8VP50 259 aa17.08■□□□□ 0.32
TSPAN3-201ENST00000267970 PSMD12O00232 456 aaPredicted RBP17.08■□□□□ 0.32
TSPAN3-201ENST00000267970 SCGNO76038 276 aa17.08■□□□□ 0.32
TSPAN3-201ENST00000267970 SUPT20HL2P0C7V6 817 aa17.08■□□□□ 0.32
TSPAN3-201ENST00000267970 EPORP19235 508 aa17.08■□□□□ 0.32
TSPAN3-201ENST00000267970 GSTM5P46439 218 aa17.08■□□□□ 0.32
TSPAN3-201ENST00000267970 DLG4P78352 724 aa17.08■□□□□ 0.32
TSPAN3-201ENST00000267970 CYP20A1Q6UW02 462 aa17.08■□□□□ 0.32
TSPAN3-201ENST00000267970 PRR23CQ6ZRP0 262 aa17.08■□□□□ 0.32
TSPAN3-201ENST00000267970 FAM20CQ8IXL6 584 aa17.08■□□□□ 0.32
TSPAN3-201ENST00000267970 SVOPQ8N4V2 548 aa17.08■□□□□ 0.32
TSPAN3-201ENST00000267970 SLC9A7Q96T83 725 aa17.08■□□□□ 0.32
TSPAN3-201ENST00000267970 MTG1Q9BT17 334 aaPredicted RBP17.08■□□□□ 0.32
TSPAN3-201ENST00000267970 DRG1Q9Y295 367 aaKnown RBP17.08■□□□□ 0.32
TSPAN3-201ENST00000267970 TRIM3O75382 744 aaPredicted RBP17.08■□□□□ 0.32
TSPAN3-201ENST00000267970 PPP2R1BP30154 601 aa17.08■□□□□ 0.32
TSPAN3-201ENST00000267970 GCNT7Q6ZNI0 430 aa17.08■□□□□ 0.32
TSPAN3-201ENST00000267970 TMEM169Q96HH4 297 aa17.08■□□□□ 0.32
TSPAN3-201ENST00000267970 LRCH1Q9Y2L9 728 aa17.08■□□□□ 0.32
TSPAN3-201ENST00000267970 LRATO95237 230 aa17.08■□□□□ 0.32
TSPAN3-201ENST00000267970 RALGDSQ12967 914 aa17.08■□□□□ 0.32
TSPAN3-201ENST00000267970 DNAJB3Q8WWF6 145 aa17.08■□□□□ 0.32
TSPAN3-201ENST00000267970 REXO5Q96IC2 774 aaKnown RBP17.08■□□□□ 0.32
TSPAN3-201ENST00000267970 PARK7Q99497 189 aaKnown RBP17.08■□□□□ 0.32
TSPAN3-201ENST00000267970 DNAJC18Q9H819 358 aa17.08■□□□□ 0.32
TSPAN3-201ENST00000267970 CDC42EP1Q00587 391 aa17.07■□□□□ 0.32
TSPAN3-201ENST00000267970 TROAPQ12815 778 aa17.07■□□□□ 0.32
TSPAN3-201ENST00000267970 PRKAA1Q13131 559 aa17.07■□□□□ 0.32
TSPAN3-201ENST00000267970 TMEM132CQ8N3T6 1108 aa17.07■□□□□ 0.32
TSPAN3-201ENST00000267970 PDCD10Q9BUL8 212 aa17.07■□□□□ 0.32
TSPAN3-201ENST00000267970 NAMPTP43490 491 aa17.07■□□□□ 0.32
TSPAN3-201ENST00000267970 PTDSS1P48651 473 aaKnown RBP17.07■□□□□ 0.32
TSPAN3-201ENST00000267970 TAF13Q15543 124 aa17.07■□□□□ 0.32
TSPAN3-201ENST00000267970 OSCP1Q8WVF1 389 aa17.07■□□□□ 0.32
TSPAN3-201ENST00000267970 ZFYVE28Q9HCC9 887 aa17.07■□□□□ 0.32
TSPAN3-201ENST00000267970 PCDH12Q9NPG4 1184 aa17.07■□□□□ 0.32
TSPAN3-201ENST00000267970 EGFL7Q9UHF1 273 aa17.07■□□□□ 0.32
TSPAN3-201ENST00000267970 MYO5CQ9NQX4 1742 aa17.07■□□□□ 0.32
TSPAN3-201ENST00000267970 USP42Q9H9J4 1324 aaKnown RBP17.07■□□□□ 0.32
TSPAN3-201ENST00000267970 TMEM114B3SHH9 223 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 124.4 ms