RNA–Protein interactions for RNA: ENST00000467114.2

PRPF40A-205, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-205ENST00000467114 LILRB3O75022 631 aa11.02□□□□□ -0.65
PRPF40A-205ENST00000467114 VARSP26640 1264 aaKnown RBP11.02□□□□□ -0.65
PRPF40A-205ENST00000467114 CTHP32929 405 aa11.02□□□□□ -0.65
PRPF40A-205ENST00000467114 MPNDQ8N594 471 aa11.02□□□□□ -0.65
PRPF40A-205ENST00000467114 QPCTQ16769 361 aa11.01□□□□□ -0.65
PRPF40A-205ENST00000467114 MAP10Q9P2G4 905 aa11□□□□□ -0.65
PRPF40A-205ENST00000467114 WASF2Q9Y6W5 498 aa11□□□□□ -0.65
PRPF40A-205ENST00000467114 PER1O15534 1290 aaPredicted RBP10.99□□□□□ -0.65
PRPF40A-205ENST00000467114 LCE2AQ5TA79 106 aaPredicted RBP10.99□□□□□ -0.65
PRPF40A-205ENST00000467114 TREML4Q6UXN2 200 aa10.99□□□□□ -0.65
PRPF40A-205ENST00000467114 TRIM47Q96LD4 638 aa10.99□□□□□ -0.65
PRPF40A-205ENST00000467114 RSPH6AQ9H0K4 717 aa10.99□□□□□ -0.65
PRPF40A-205ENST00000467114 SENP2Q9HC62 589 aa10.99□□□□□ -0.65
PRPF40A-205ENST00000467114 NUTM2BA6NNL0 878 aaPredicted RBP10.98□□□□□ -0.65
PRPF40A-205ENST00000467114 NUTM2EB1AL46 878 aaPredicted RBP10.98□□□□□ -0.65
PRPF40A-205ENST00000467114 CLK2P49760 499 aaKnown RBP10.98□□□□□ -0.65
PRPF40A-205ENST00000467114 NUTM2DQ5VT03 806 aaPredicted RBP10.98□□□□□ -0.65
PRPF40A-205ENST00000467114 NUTM2AQ8IVF1 878 aaPredicted RBP10.98□□□□□ -0.65
PRPF40A-205ENST00000467114 TLL2Q9Y6L7 1015 aa10.98□□□□□ -0.65
PRPF40A-205ENST00000467114 PLEKHG3A1L390 1219 aa10.97□□□□□ -0.65
PRPF40A-205ENST00000467114 SNRPBP14678 240 aaKnown RBP10.96□□□□□ -0.65
PRPF40A-205ENST00000467114 BCANQ96GW7 911 aa10.96□□□□□ -0.65
PRPF40A-205ENST00000467114 RTL5Q5HYW3 569 aaPredicted RBP10.95□□□□□ -0.66
PRPF40A-205ENST00000467114 KIFC2Q96AC6 838 aa10.95□□□□□ -0.66
PRPF40A-205ENST00000467114 CAPN5O15484 640 aaPredicted RBP10.94□□□□□ -0.66
PRPF40A-205ENST00000467114 FAM174AQ8TBP5 190 aa10.94□□□□□ -0.66
PRPF40A-205ENST00000467114 TSC1Q92574 1164 aa10.94□□□□□ -0.66
PRPF40A-205ENST00000467114 FOXJ1Q92949 421 aa10.94□□□□□ -0.66
PRPF40A-205ENST00000467114 HELBQ8NG08 1087 aaPredicted RBP10.93□□□□□ -0.66
PRPF40A-205ENST00000467114 POLR3EQ9NVU0 708 aa10.93□□□□□ -0.66
PRPF40A-205ENST00000467114 CDK15Q96Q40 435 aa10.92□□□□□ -0.66
PRPF40A-205ENST00000467114 NFX1Q12986 1120 aaKnown RBP10.91□□□□□ -0.66
PRPF40A-205ENST00000467114 NNTQ13423 1086 aa10.91□□□□□ -0.66
PRPF40A-205ENST00000467114 TRIM46Q7Z4K8 759 aa10.91□□□□□ -0.66
PRPF40A-205ENST00000467114 ARMC2Q8NEN0 867 aa10.91□□□□□ -0.66
PRPF40A-205ENST00000467114 C4orf48Q5BLP8 95 aa10.9□□□□□ -0.66
PRPF40A-205ENST00000467114 BPHLQ86WA6 291 aaPredicted RBP10.9□□□□□ -0.66
PRPF40A-205ENST00000467114 KDM4CQ9H3R0 1056 aa10.9□□□□□ -0.66
PRPF40A-205ENST00000467114 WFS1O76024 890 aa10.89□□□□□ -0.67
PRPF40A-205ENST00000467114 ADH1CP00326 375 aa10.89□□□□□ -0.67
PRPF40A-205ENST00000467114 BMP1P13497 986 aa10.89□□□□□ -0.67
PRPF40A-205ENST00000467114 SKIV2LQ15477 1246 aaKnown RBP10.89□□□□□ -0.67
PRPF40A-205ENST00000467114 KLF16Q9BXK1 252 aaPredicted RBP10.88□□□□□ -0.67
PRPF40A-205ENST00000467114 GPBP1L1Q9HC44 474 aaPredicted RBP10.88□□□□□ -0.67
PRPF40A-205ENST00000467114 SH3D19Q5HYK7 790 aa10.87□□□□□ -0.67
PRPF40A-205ENST00000467114 SH3RF1Q7Z6J0 888 aa10.87□□□□□ -0.67
PRPF40A-205ENST00000467114 DDRGK1Q96HY6 314 aa10.87□□□□□ -0.67
PRPF40A-205ENST00000467114 TIMP2P16035 220 aa10.86□□□□□ -0.67
PRPF40A-205ENST00000467114 AGERQ15109 404 aa10.86□□□□□ -0.67
PRPF40A-205ENST00000467114 NBPF14Q5TI25 921 aa10.86□□□□□ -0.67
PRPF40A-205ENST00000467114 FAM117AQ9C073 453 aa10.86□□□□□ -0.67
PRPF40A-205ENST00000467114 TERTO14746 1132 aaKnown RBP10.85□□□□□ -0.67
PRPF40A-205ENST00000467114 CTDSPL2Q05D32 466 aa10.85□□□□□ -0.67
PRPF40A-205ENST00000467114 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.85□□□□□ -0.67
PRPF40A-205ENST00000467114 C1QTNF2Q9BXJ5 285 aa10.85□□□□□ -0.67
PRPF40A-205ENST00000467114 GRM5P41594 1212 aa10.84□□□□□ -0.67
PRPF40A-205ENST00000467114 WDR4P57081 412 aaKnown RBP10.84□□□□□ -0.67
PRPF40A-205ENST00000467114 NR5A1Q13285 461 aa10.84□□□□□ -0.67
PRPF40A-205ENST00000467114 ARID5BQ14865 1188 aa10.84□□□□□ -0.67
PRPF40A-205ENST00000467114 SH3BP5LQ7L8J4 393 aa10.84□□□□□ -0.67
PRPF40A-205ENST00000467114 GPKOWQ92917 476 aaPredicted RBP eCLIP10.84□□□□□ -0.674e-6■■□□□ 11.8
PRPF40A-205ENST00000467114 FBXO31Q5XUX0 539 aaPredicted RBP10.83□□□□□ -0.68
PRPF40A-205ENST00000467114 PPP2R2DQ66LE6 453 aa10.83□□□□□ -0.68
PRPF40A-205ENST00000467114 PROCA1Q8NCQ7 364 aaPredicted RBP10.82□□□□□ -0.68
PRPF40A-205ENST00000467114 ZFP42Q96MM3 310 aa10.82□□□□□ -0.68
PRPF40A-205ENST00000467114 NR3C2P08235 984 aa10.81□□□□□ -0.68
PRPF40A-205ENST00000467114 MRPL14Q6P1L8 145 aaKnown RBP10.81□□□□□ -0.68
PRPF40A-205ENST00000467114 TRMT44Q8IYL2 757 aaKnown RBP10.81□□□□□ -0.68
PRPF40A-205ENST00000467114 MAP4K5Q9Y4K4 846 aa10.81□□□□□ -0.68
PRPF40A-205ENST00000467114 WIPF1O43516 503 aa10.8□□□□□ -0.68
PRPF40A-205ENST00000467114 LCE2CQ5TA81 110 aa10.8□□□□□ -0.68
PRPF40A-205ENST00000467114 LRRN4Q8WUT4 740 aa10.79□□□□□ -0.68
PRPF40A-205ENST00000467114 ZIC2O95409 532 aaPredicted RBP10.78□□□□□ -0.68
PRPF40A-205ENST00000467114 ITPKCQ96DU7 683 aa10.78□□□□□ -0.68
PRPF40A-205ENST00000467114 NXF1Q9UBU9 619 aaKnown RBP10.78□□□□□ -0.68
PRPF40A-205ENST00000467114 SCARF1Q14162 830 aa10.77□□□□□ -0.69
PRPF40A-205ENST00000467114 PDXDC2PQ6P474 469 aa10.77□□□□□ -0.69
PRPF40A-205ENST00000467114 ZFAND3Q9H8U3 227 aa10.77□□□□□ -0.69
PRPF40A-205ENST00000467114 MAGEB6P1A0A0J9YX57 407 aa10.76□□□□□ -0.69
PRPF40A-205ENST00000467114 NPAS3Q8IXF0 933 aa10.76□□□□□ -0.69
PRPF40A-205ENST00000467114 FKBPLQ9UIM3 349 aa10.76□□□□□ -0.69
PRPF40A-205ENST00000467114 ERFEQ4G0M1 354 aa10.75□□□□□ -0.69
PRPF40A-205ENST00000467114 PURBQ96QR8 312 aaKnown RBP10.75□□□□□ -0.69
PRPF40A-205ENST00000467114 FSHRP23945 695 aa10.74□□□□□ -0.69
PRPF40A-205ENST00000467114 VASH1Q7L8A9 365 aaPredicted RBP10.74□□□□□ -0.69
PRPF40A-205ENST00000467114 ZC3H4Q9UPT8 1303 aaKnown RBP10.74□□□□□ -0.69
PRPF40A-205ENST00000467114 NR6A1Q15406 480 aa10.73□□□□□ -0.69
PRPF40A-205ENST00000467114 SLC16A10Q8TF71 515 aa10.73□□□□□ -0.69
PRPF40A-205ENST00000467114 CARD14Q9BXL6 1004 aa10.73□□□□□ -0.69
PRPF40A-205ENST00000467114 ATP1B4Q9UN42 357 aaPredicted RBP10.73□□□□□ -0.69
PRPF40A-205ENST00000467114 ARHGAP9Q9BRR9 750 aa10.72□□□□□ -0.69
PRPF40A-205ENST00000467114 AP1G2O75843 785 aa10.71□□□□□ -0.69
PRPF40A-205ENST00000467114 MEIOBQ8N635 442 aa10.71□□□□□ -0.69
PRPF40A-205ENST00000467114 GOPCQ9HD26 462 aa10.71□□□□□ -0.69
PRPF40A-205ENST00000467114 EMILIN1Q9Y6C2 1016 aa10.71□□□□□ -0.69
PRPF40A-205ENST00000467114 H3BM21 787 aa10.7□□□□□ -0.7
PRPF40A-205ENST00000467114 CCDC116Q8IYX3 515 aa10.7□□□□□ -0.7
PRPF40A-205ENST00000467114 INSM1Q01101 510 aaPredicted RBP10.69□□□□□ -0.7
PRPF40A-205ENST00000467114 GPSM3Q9Y4H4 160 aa10.69□□□□□ -0.7
PRPF40A-205ENST00000467114 LINC00528Q8N1L1 170 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms