RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 IGF1RP08069 1367 aa1.72□□□□□ -2.13
RNU4-88P-201ENST00000411220 SMAPO00193 183 aa1.72□□□□□ -2.13
RNU4-88P-201ENST00000411220 GNB5O14775 395 aa1.72□□□□□ -2.13
RNU4-88P-201ENST00000411220 FCHSD2O94868 740 aa1.72□□□□□ -2.13
RNU4-88P-201ENST00000411220 TTLL10Q6ZVT0 673 aa1.72□□□□□ -2.13
RNU4-88P-201ENST00000411220 FBXW7Q969H0 707 aa1.72□□□□□ -2.13
RNU4-88P-201ENST00000411220 TRIM32Q13049 653 aa1.71□□□□□ -2.14
RNU4-88P-201ENST00000411220 LINC00114Q6XXX2 140 aa1.71□□□□□ -2.14
RNU4-88P-201ENST00000411220 RNF19BQ6ZMZ0 732 aa1.71□□□□□ -2.14
RNU4-88P-201ENST00000411220 SLF2Q8IX21 1173 aa1.71□□□□□ -2.14
RNU4-88P-201ENST00000411220 MBIPQ9NS73 344 aa1.71□□□□□ -2.14
RNU4-88P-201ENST00000411220 OSBPP22059 807 aa1.7□□□□□ -2.14
RNU4-88P-201ENST00000411220 ZNF800Q2TB10 664 aaPredicted RBP eCLIP1.7□□□□□ -2.14
RNU4-88P-201ENST00000411220 ZNF648Q5T619 568 aaPredicted RBP1.7□□□□□ -2.14
RNU4-88P-201ENST00000411220 TSKSQ9UJT2 592 aa1.7□□□□□ -2.14
RNU4-88P-201ENST00000411220 PCDHGA10Q9Y5H3 936 aa1.7□□□□□ -2.14
RNU4-88P-201ENST00000411220 C6orf118Q5T5N4 469 aa1.69□□□□□ -2.14
RNU4-88P-201ENST00000411220 RC3H1Q5TC82 1133 aaKnown RBP1.69□□□□□ -2.14
RNU4-88P-201ENST00000411220 ASIC4Q96FT7 647 aa1.69□□□□□ -2.14
RNU4-88P-201ENST00000411220 SSTR4P31391 388 aa1.68□□□□□ -2.14
RNU4-88P-201ENST00000411220 PKN1Q16512 942 aa1.68□□□□□ -2.14
RNU4-88P-201ENST00000411220 FBXO22Q8NEZ5 403 aa1.68□□□□□ -2.14
RNU4-88P-201ENST00000411220 BORCS6Q96GS4 357 aa1.68□□□□□ -2.14
RNU4-88P-201ENST00000411220 SOS2Q07890 1332 aaPredicted RBP1.67□□□□□ -2.14
RNU4-88P-201ENST00000411220 SERINC4A6NH21 518 aa1.67□□□□□ -2.14
RNU4-88P-201ENST00000411220 NR1I2O75469 434 aa1.67□□□□□ -2.14
RNU4-88P-201ENST00000411220 CTSWP56202 376 aa1.67□□□□□ -2.14
RNU4-88P-201ENST00000411220 C6orf132Q5T0Z8 1188 aa1.67□□□□□ -2.14
RNU4-88P-201ENST00000411220 TYW1BQ6NUM6 668 aa1.67□□□□□ -2.14
RNU4-88P-201ENST00000411220 SHISA8B8ZZ34 492 aa1.66□□□□□ -2.14
RNU4-88P-201ENST00000411220 EVI5O60447 810 aa1.66□□□□□ -2.14
RNU4-88P-201ENST00000411220 SLC4A3P48751 1232 aa1.66□□□□□ -2.14
RNU4-88P-201ENST00000411220 ATXN1P54253 815 aaKnown RBP1.66□□□□□ -2.14
RNU4-88P-201ENST00000411220 KRTAP10-6P60371 365 aaPredicted RBP1.66□□□□□ -2.14
RNU4-88P-201ENST00000411220 ADGRE2Q9UHX3 823 aa1.66□□□□□ -2.14
RNU4-88P-201ENST00000411220 SLC35F4A4IF30 521 aa1.65□□□□□ -2.15
RNU4-88P-201ENST00000411220 CD97P48960 835 aa1.65□□□□□ -2.15
RNU4-88P-201ENST00000411220 TRERF1Q96PN7 1200 aa1.65□□□□□ -2.15
RNU4-88P-201ENST00000411220 SPSB2Q99619 263 aa1.65□□□□□ -2.15
RNU4-88P-201ENST00000411220 BMP2P12643 396 aa1.64□□□□□ -2.15
RNU4-88P-201ENST00000411220 DSG2Q14126 1118 aa1.64□□□□□ -2.15
RNU4-88P-201ENST00000411220 MYRFLQ96LU7 910 aa1.64□□□□□ -2.15
RNU4-88P-201ENST00000411220 LMCD1Q9NZU5 365 aa1.64□□□□□ -2.15
RNU4-88P-201ENST00000411220 SPATA31C1P0DKV0 1188 aa1.63□□□□□ -2.15
RNU4-88P-201ENST00000411220 HOXB4P17483 251 aaPredicted RBP1.63□□□□□ -2.15
RNU4-88P-201ENST00000411220 TGM1P22735 817 aa1.63□□□□□ -2.15
RNU4-88P-201ENST00000411220 LCE1EQ5T753 118 aa1.63□□□□□ -2.15
RNU4-88P-201ENST00000411220 GIGYF2Q6Y7W6 1299 aaKnown RBP1.63□□□□□ -2.15
RNU4-88P-201ENST00000411220 TIMP2P16035 220 aa1.62□□□□□ -2.15
RNU4-88P-201ENST00000411220 KRTAP29-1A8MX34 341 aaPredicted RBP1.61□□□□□ -2.15
RNU4-88P-201ENST00000411220 NBPF26B4DH59 902 aa1.61□□□□□ -2.15
RNU4-88P-201ENST00000411220 SIAH2O43255 324 aa1.61□□□□□ -2.15
RNU4-88P-201ENST00000411220 UPP2O95045 317 aa1.61□□□□□ -2.15
RNU4-88P-201ENST00000411220 WNT7BP56706 349 aa1.61□□□□□ -2.15
RNU4-88P-201ENST00000411220 KRTAP10-2P60368 255 aa1.61□□□□□ -2.15
RNU4-88P-201ENST00000411220 SWT1Q5T5J6 900 aaKnown RBP1.61□□□□□ -2.15
RNU4-88P-201ENST00000411220 LCNL1Q6ZST4 164 aa1.61□□□□□ -2.15
RNU4-88P-201ENST00000411220 TATDN2Q93075 761 aa1.61□□□□□ -2.15
RNU4-88P-201ENST00000411220 MENTQ9BUN1 341 aa1.61□□□□□ -2.15
RNU4-88P-201ENST00000411220 ACTN4O43707 911 aaKnown RBP1.6□□□□□ -2.15
RNU4-88P-201ENST00000411220 ADH1CP00326 375 aa1.6□□□□□ -2.15
RNU4-88P-201ENST00000411220 AMHP03971 560 aa1.6□□□□□ -2.15
RNU4-88P-201ENST00000411220 WDR4P57081 412 aaKnown RBP1.6□□□□□ -2.15
RNU4-88P-201ENST00000411220 SIAH1Q8IUQ4 282 aa1.6□□□□□ -2.15
RNU4-88P-201ENST00000411220 GPHNQ9NQX3 736 aaPredicted RBP1.6□□□□□ -2.15
RNU4-88P-201ENST00000411220 PNMA3Q9UL41 463 aa1.6□□□□□ -2.15
RNU4-88P-201ENST00000411220 KIAA1324LA8MWY0 1029 aaPredicted RBP1.59□□□□□ -2.15
RNU4-88P-201ENST00000411220 AMPD1P23109 780 aa1.59□□□□□ -2.15
RNU4-88P-201ENST00000411220 SKOR1P84550 965 aa1.59□□□□□ -2.15
RNU4-88P-201ENST00000411220 ERFEQ4G0M1 354 aa1.59□□□□□ -2.15
RNU4-88P-201ENST00000411220 OXCT2Q9BYC2 517 aaPredicted RBP1.59□□□□□ -2.15
RNU4-88P-201ENST00000411220 NSFL1CQ9UNZ2 370 aaKnown RBP1.59□□□□□ -2.15
RNU4-88P-201ENST00000411220 AKAP8O43823 692 aaKnown RBP1.58□□□□□ -2.16
RNU4-88P-201ENST00000411220 PHF14O94880 888 aa1.58□□□□□ -2.16
RNU4-88P-201ENST00000411220 APBA3O96018 575 aa1.58□□□□□ -2.16
RNU4-88P-201ENST00000411220 MAP3K9P80192 1104 aa1.58□□□□□ -2.16
RNU4-88P-201ENST00000411220 SCUBE3Q8IX30 993 aa1.58□□□□□ -2.16
RNU4-88P-201ENST00000411220 RELTQ969Z4 430 aa1.58□□□□□ -2.16
RNU4-88P-201ENST00000411220 SLC4A1APQ9BWU0 796 aaKnown RBP1.58□□□□□ -2.16
RNU4-88P-201ENST00000411220 TTLL8A6PVC2 850 aa1.57□□□□□ -2.16
RNU4-88P-201ENST00000411220 C3orf80F5H4A9 247 aa1.57□□□□□ -2.16
RNU4-88P-201ENST00000411220 KMT5BQ4FZB7 885 aa1.57□□□□□ -2.16
RNU4-88P-201ENST00000411220 LINC00528Q8N1L1 170 aa1.57□□□□□ -2.16
RNU4-88P-201ENST00000411220 ZSCAN18Q8TBC5 510 aaPredicted RBP1.57□□□□□ -2.16
RNU4-88P-201ENST00000411220 TOX2Q96NM4 488 aa1.57□□□□□ -2.16
RNU4-88P-201ENST00000411220 INHBBP09529 407 aa1.56□□□□□ -2.16
RNU4-88P-201ENST00000411220 NNTQ13423 1086 aa1.56□□□□□ -2.16
RNU4-88P-201ENST00000411220 EDARADDQ8WWZ3 215 aa1.56□□□□□ -2.16
RNU4-88P-201ENST00000411220 VWCEQ96DN2 955 aa1.56□□□□□ -2.16
RNU4-88P-201ENST00000411220 NOTCH2Q04721 2471 aa1.56□□□□□ -2.16
RNU4-88P-201ENST00000411220 FIGNL2A6NMB9 653 aa1.55□□□□□ -2.16
RNU4-88P-201ENST00000411220 FARP2O94887 1054 aaPredicted RBP1.55□□□□□ -2.16
RNU4-88P-201ENST00000411220 DGKGP49619 791 aa1.55□□□□□ -2.16
RNU4-88P-201ENST00000411220 C1orf229Q6ZS94 237 aaPredicted RBP1.55□□□□□ -2.16
RNU4-88P-201ENST00000411220 KSR1Q8IVT5 923 aa1.55□□□□□ -2.16
RNU4-88P-201ENST00000411220 MPNDQ8N594 471 aa1.55□□□□□ -2.16
RNU4-88P-201ENST00000411220 EHBP1Q8NDI1 1231 aa1.55□□□□□ -2.16
RNU4-88P-201ENST00000411220 SENP3-EIF4A1A0A087X0R7 540 aa1.54□□□□□ -2.16
RNU4-88P-201ENST00000411220 ADAMTS4O75173 837 aa1.54□□□□□ -2.16
RNU4-88P-201ENST00000411220 ZSCAN22P10073 491 aaPredicted RBP1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms