RNA–Protein interactions for RNA: ENST00000587788.1

SDF2-206, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-206ENST00000587788 DAB2IPQ5VWQ8 1189 aa5.94□□□□□ -1.46
SDF2-206ENST00000587788 OR6B2Q6IFH4 312 aa5.94□□□□□ -1.46
SDF2-206ENST00000587788 DARS2Q6PI48 645 aaKnown RBP5.94□□□□□ -1.46
SDF2-206ENST00000587788 AGMOQ6ZNB7 445 aa5.94□□□□□ -1.46
SDF2-206ENST00000587788 RGS9BPQ6ZS82 235 aa5.94□□□□□ -1.46
SDF2-206ENST00000587788 LIMS2Q7Z4I7 341 aa5.94□□□□□ -1.46
SDF2-206ENST00000587788 TRABD2AQ86V40 505 aa5.94□□□□□ -1.46
SDF2-206ENST00000587788 METTL23Q86XA0 190 aa5.94□□□□□ -1.46
SDF2-206ENST00000587788 CDKL3Q8IVW4 592 aaPredicted RBP5.94□□□□□ -1.46
SDF2-206ENST00000587788 LRRC34Q8IZ02 419 aa5.94□□□□□ -1.46
SDF2-206ENST00000587788 ABI1Q8IZP0 508 aa5.94□□□□□ -1.46
SDF2-206ENST00000587788 THEM5Q8N1Q8 247 aa5.94□□□□□ -1.46
SDF2-206ENST00000587788 TOP6BLQ8N6T0 577 aa5.94□□□□□ -1.46
SDF2-206ENST00000587788 ARFGAP1Q8N6T3 406 aa5.94□□□□□ -1.46
SDF2-206ENST00000587788 NAT8LQ8N9F0 302 aa5.94□□□□□ -1.46
SDF2-206ENST00000587788 ANKRD52Q8NB46 1076 aa5.94□□□□□ -1.46
SDF2-206ENST00000587788 C3orf58Q8NDZ4 430 aa5.94□□□□□ -1.46
SDF2-206ENST00000587788 GSTCDQ8NEC7 633 aa5.94□□□□□ -1.46
SDF2-206ENST00000587788 UHMK1Q8TAS1 419 aaKnown RBP5.94□□□□□ -1.46
SDF2-206ENST00000587788 PHOSPHO2Q8TCD6 241 aa5.94□□□□□ -1.46
SDF2-206ENST00000587788 PYROXD1Q8WU10 500 aa5.94□□□□□ -1.46
SDF2-206ENST00000587788 RXFP2Q8WXD0 754 aa5.94□□□□□ -1.46
SDF2-206ENST00000587788 CCT6BQ92526 530 aa5.94□□□□□ -1.46
SDF2-206ENST00000587788 PRCCQ92733 491 aaPredicted RBP5.94□□□□□ -1.46
SDF2-206ENST00000587788 TOP1MTQ969P6 601 aa5.94□□□□□ -1.46
SDF2-206ENST00000587788 LRRC39Q96DD0 335 aa5.94□□□□□ -1.46
SDF2-206ENST00000587788 RTP4Q96DX8 246 aa5.94□□□□□ -1.46
SDF2-206ENST00000587788 TNIP3Q96KP6 325 aa5.94□□□□□ -1.46
SDF2-206ENST00000587788 HSFY1Q96LI6 401 aa5.94□□□□□ -1.46
SDF2-206ENST00000587788 FAM193BQ96PV7 902 aaPredicted RBP5.94□□□□□ -1.46
SDF2-206ENST00000587788 RNF157Q96PX1 679 aa5.94□□□□□ -1.46
SDF2-206ENST00000587788 PPP1R10Q96QC0 940 aaKnown RBP5.94□□□□□ -1.46
SDF2-206ENST00000587788 TWNKQ96RR1 684 aa5.94□□□□□ -1.46
SDF2-206ENST00000587788 SMC6Q96SB8 1091 aa5.94□□□□□ -1.46
SDF2-206ENST00000587788 GAD1Q99259 594 aa5.94□□□□□ -1.46
SDF2-206ENST00000587788 CYTH2Q99418 400 aa5.94□□□□□ -1.46
SDF2-206ENST00000587788 PRMT1Q99873 361 aaKnown RBP5.94□□□□□ -1.46
SDF2-206ENST00000587788 FERMT1Q9BQL6 677 aa5.94□□□□□ -1.46
SDF2-206ENST00000587788 ZNF670Q9BS34 389 aa5.94□□□□□ -1.46
SDF2-206ENST00000587788 TMEM121Q9BTD3 319 aa5.94□□□□□ -1.46
SDF2-206ENST00000587788 COLEC11Q9BWP8 271 aa5.94□□□□□ -1.46
SDF2-206ENST00000587788 APOL6Q9BWW8 343 aa5.94□□□□□ -1.46
SDF2-206ENST00000587788 CALN1Q9BXU9 219 aa5.94□□□□□ -1.46
SDF2-206ENST00000587788 OXCT2Q9BYC2 517 aaPredicted RBP5.94□□□□□ -1.46
SDF2-206ENST00000587788 SNX25Q9H3E2 840 aa5.94□□□□□ -1.46
SDF2-206ENST00000587788 NXF3Q9H4D5 531 aaKnown RBP5.94□□□□□ -1.46
SDF2-206ENST00000587788 PRDM12Q9H4Q4 367 aa5.94□□□□□ -1.46
SDF2-206ENST00000587788 RABEP2Q9H5N1 569 aa5.94□□□□□ -1.46
SDF2-206ENST00000587788 VPS37BQ9H9H4 285 aa5.94□□□□□ -1.46
SDF2-206ENST00000587788 SLC28A3Q9HAS3 691 aa5.94□□□□□ -1.46
SDF2-206ENST00000587788 RC3H2Q9HBD1 1191 aaKnown RBP5.94□□□□□ -1.46
SDF2-206ENST00000587788 KLHL11Q9NVR0 708 aa5.94□□□□□ -1.46
SDF2-206ENST00000587788 HAUS2Q9NVX0 235 aa5.94□□□□□ -1.46
SDF2-206ENST00000587788 EURLQ9NYK6 297 aa5.94□□□□□ -1.46
SDF2-206ENST00000587788 PAK5Q9P286 719 aa5.94□□□□□ -1.46
SDF2-206ENST00000587788 RCOR3Q9P2K3 495 aaPredicted RBP5.94□□□□□ -1.46
SDF2-206ENST00000587788 PSMC3IPQ9P2W1 217 aaPredicted RBP5.94□□□□□ -1.46
SDF2-206ENST00000587788 FAM8A1Q9UBU6 413 aa5.94□□□□□ -1.46
SDF2-206ENST00000587788 MSRAQ9UJ68 235 aa5.94□□□□□ -1.46
SDF2-206ENST00000587788 TSPAN16Q9UKR8 245 aa5.94□□□□□ -1.46
SDF2-206ENST00000587788 DSEQ9UL01 958 aa5.94□□□□□ -1.46
SDF2-206ENST00000587788 USP15Q9Y4E8 981 aaPredicted RBP5.94□□□□□ -1.46
SDF2-206ENST00000587788 TCF20Q9UGU0 1960 aaKnown RBP5.93□□□□□ -1.46
SDF2-206ENST00000587788 TRANK1O15050 2925 aa5.93□□□□□ -1.46
SDF2-206ENST00000587788 PRRC2BQ5JSZ5 2229 aaKnown RBP5.93□□□□□ -1.46
SDF2-206ENST00000587788 TMEM265A0A087WTH1 108 aa5.93□□□□□ -1.46
SDF2-206ENST00000587788 BCLAF3A2AJT9 711 aaKnown RBP5.93□□□□□ -1.46
SDF2-206ENST00000587788 CFAP73A6NFT4 308 aa5.93□□□□□ -1.46
SDF2-206ENST00000587788 TCP11X1B4DZS4 312 aa5.93□□□□□ -1.46
SDF2-206ENST00000587788 CYB561D2O14569 222 aa5.93□□□□□ -1.46
SDF2-206ENST00000587788 PTGESO14684 152 aa5.93□□□□□ -1.46
SDF2-206ENST00000587788 TRDMT1O14717 391 aaKnown RBP5.93□□□□□ -1.46
SDF2-206ENST00000587788 APOL1O14791 398 aa5.93□□□□□ -1.46
SDF2-206ENST00000587788 TM9SF1O15321 606 aa5.93□□□□□ -1.46
SDF2-206ENST00000587788 SNX3O60493 162 aa5.93□□□□□ -1.46
SDF2-206ENST00000587788 DNAJC8O75937 253 aaPredicted RBP5.93□□□□□ -1.46
SDF2-206ENST00000587788 ATP5HO75947 161 aa5.93□□□□□ -1.46
SDF2-206ENST00000587788 FAM155BO75949 473 aa5.93□□□□□ -1.46
SDF2-206ENST00000587788 ZWINTO95229 277 aa5.93□□□□□ -1.46
SDF2-206ENST00000587788 USP17L7P0C7H9 530 aa5.93□□□□□ -1.46
SDF2-206ENST00000587788 LINC00271P0C7V0 271 aa5.93□□□□□ -1.46
SDF2-206ENST00000587788 ARAFP10398 606 aa5.93□□□□□ -1.46
SDF2-206ENST00000587788 RBP3P10745 1247 aa5.93□□□□□ -1.46
SDF2-206ENST00000587788 TCF4P15884 667 aa5.93□□□□□ -1.46
SDF2-206ENST00000587788 KRT15P19012 456 aa5.93□□□□□ -1.46
SDF2-206ENST00000587788 IL1R2P27930 398 aa5.93□□□□□ -1.46
SDF2-206ENST00000587788 ALDH3A1P30838 453 aa5.93□□□□□ -1.46
SDF2-206ENST00000587788 MSH2P43246 934 aa5.93□□□□□ -1.46
SDF2-206ENST00000587788 MAGEA6P43360 314 aa5.93□□□□□ -1.46
SDF2-206ENST00000587788 ST13P50502 369 aaKnown RBP5.93□□□□□ -1.46
SDF2-206ENST00000587788 CDH6P55285 790 aa5.93□□□□□ -1.46
SDF2-206ENST00000587788 BCAR1P56945 870 aa5.93□□□□□ -1.46
SDF2-206ENST00000587788 SARNPP82979 210 aaKnown RBP5.93□□□□□ -1.46
SDF2-206ENST00000587788 CDK16Q00536 496 aa5.93□□□□□ -1.46
SDF2-206ENST00000587788 CCDC15Q0P6D6 951 aa5.93□□□□□ -1.46
SDF2-206ENST00000587788 GRIK3Q13003 919 aa5.93□□□□□ -1.46
SDF2-206ENST00000587788 TUSC3Q13454 348 aa5.93□□□□□ -1.46
SDF2-206ENST00000587788 DPYSL3Q14195 570 aa5.93□□□□□ -1.46
SDF2-206ENST00000587788 SPARCL1Q14515 664 aa5.93□□□□□ -1.46
SDF2-206ENST00000587788 UPP1Q16831 310 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms